RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 FER1L4A9Z1Z3 1794 aa15.05■□□□□ -0
SYNGAP1-205ENST00000470232 SAMD9Q5K651 1589 aa15.04■□□□□ -0
SYNGAP1-205ENST00000470232 NUP153P49790 1475 aaKnown RBP15.04■□□□□ -0
SYNGAP1-205ENST00000470232 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
SYNGAP1-205ENST00000470232 TTC37Q6PGP7 1564 aa15.03■□□□□ -0
SYNGAP1-205ENST00000470232 PREX1Q8TCU6 1659 aa15.02□□□□□ -0.01
SYNGAP1-205ENST00000470232 RANGAP1P46060 587 aaPredicted RBP15.01□□□□□ -0.01
SYNGAP1-205ENST00000470232 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
SYNGAP1-205ENST00000470232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.01□□□□□ -0.01
SYNGAP1-205ENST00000470232 ATP10AO60312 1499 aa15.01□□□□□ -0.01
SYNGAP1-205ENST00000470232 SCAPERQ9BY12 1400 aa15□□□□□ -0.01
SYNGAP1-205ENST00000470232 SETD1BQ9UPS6 1966 aaKnown RBP15□□□□□ -0.01
SYNGAP1-205ENST00000470232 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
SYNGAP1-205ENST00000470232 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
SYNGAP1-205ENST00000470232 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
SYNGAP1-205ENST00000470232 ARHGEF12Q9NZN5 1544 aa14.98□□□□□ -0.01
SYNGAP1-205ENST00000470232 EFCAB2Q5VUJ9 269 aa14.98□□□□□ -0.01
SYNGAP1-205ENST00000470232 C9orf84Q5VXU9 1444 aa14.98□□□□□ -0.01
SYNGAP1-205ENST00000470232 SPATA31D1Q6ZQQ2 1576 aa14.98□□□□□ -0.01
SYNGAP1-205ENST00000470232 ESF1Q9H501 851 aaKnown RBP14.97□□□□□ -0.01
SYNGAP1-205ENST00000470232 MYT1LQ9UL68 1186 aa14.97□□□□□ -0.01
SYNGAP1-205ENST00000470232 PTPRTO14522 1441 aa14.96□□□□□ -0.01
SYNGAP1-205ENST00000470232 MSH5O43196 834 aa14.96□□□□□ -0.01
SYNGAP1-205ENST00000470232 PLCH2O75038 1416 aa14.96□□□□□ -0.01
SYNGAP1-205ENST00000470232 SIGLEC1Q9BZZ2 1709 aa14.96□□□□□ -0.01
SYNGAP1-205ENST00000470232 STRCQ7RTU9 1775 aa14.95□□□□□ -0.02
SYNGAP1-205ENST00000470232 CDK11AQ9UQ88 783 aaPredicted RBP14.93□□□□□ -0.02
SYNGAP1-205ENST00000470232 IQSEC2Q5JU85 1478 aa14.92□□□□□ -0.02
SYNGAP1-205ENST00000470232 ZNF518AQ6AHZ1 1483 aa14.89□□□□□ -0.03
SYNGAP1-205ENST00000470232 ATP1B4Q9UN42 357 aaPredicted RBP14.88□□□□□ -0.03
SYNGAP1-205ENST00000470232 TRAPPC8Q9Y2L5 1435 aa14.87□□□□□ -0.03
SYNGAP1-205ENST00000470232 AFAP1Q8N556 730 aa14.87□□□□□ -0.03
SYNGAP1-205ENST00000470232 EEA1Q15075 1411 aa14.84□□□□□ -0.03
SYNGAP1-205ENST00000470232 MYO5CQ9NQX4 1742 aa14.84□□□□□ -0.03
SYNGAP1-205ENST00000470232 UBAP1LF5GYI3 381 aa14.84□□□□□ -0.03
SYNGAP1-205ENST00000470232 LTBP4Q8N2S1 1624 aa14.84□□□□□ -0.03
SYNGAP1-205ENST00000470232 CDK13Q14004 1512 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-205ENST00000470232 CNTLNQ9NXG0 1405 aa14.82□□□□□ -0.04
SYNGAP1-205ENST00000470232 NCOA1Q15788 1441 aa14.81□□□□□ -0.04
SYNGAP1-205ENST00000470232 ARHGAP5Q13017 1502 aa14.81□□□□□ -0.04
SYNGAP1-205ENST00000470232 REREQ9P2R6 1566 aa14.81□□□□□ -0.04
SYNGAP1-205ENST00000470232 C3P01024 1663 aa14.81□□□□□ -0.04
SYNGAP1-205ENST00000470232 KDM5CP41229 1560 aa14.8□□□□□ -0.04
SYNGAP1-205ENST00000470232 CLIP1P30622 1438 aa14.79□□□□□ -0.04
SYNGAP1-205ENST00000470232 AGLP35573 1532 aa14.79□□□□□ -0.04
SYNGAP1-205ENST00000470232 FMN1Q68DA7 1419 aa14.79□□□□□ -0.04
SYNGAP1-205ENST00000470232 MLH3Q9UHC1 1453 aa14.79□□□□□ -0.04
SYNGAP1-205ENST00000470232 DIP2CQ9Y2E4 1556 aa14.77□□□□□ -0.04
SYNGAP1-205ENST00000470232 PKD2Q13563 968 aa14.77□□□□□ -0.05
SYNGAP1-205ENST00000470232 KIF14Q15058 1648 aa14.77□□□□□ -0.05
SYNGAP1-205ENST00000470232 TROQ12816 1431 aaPredicted RBP14.75□□□□□ -0.05
SYNGAP1-205ENST00000470232 NPATQ14207 1427 aa14.75□□□□□ -0.05
SYNGAP1-205ENST00000470232 NCKAP5LQ9HCH0 1330 aa14.75□□□□□ -0.05
SYNGAP1-205ENST00000470232 CAMSAP1Q5T5Y3 1602 aa14.75□□□□□ -0.05
SYNGAP1-205ENST00000470232 ZNF335Q9H4Z2 1342 aaPredicted RBP14.74□□□□□ -0.05
SYNGAP1-205ENST00000470232 ZMYM3Q14202 1370 aa14.73□□□□□ -0.05
SYNGAP1-205ENST00000470232 UBTFP17480 764 aaKnown RBP14.72□□□□□ -0.05
SYNGAP1-205ENST00000470232 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
SYNGAP1-205ENST00000470232 TOM1O60784 492 aa14.71□□□□□ -0.05
SYNGAP1-205ENST00000470232 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
SYNGAP1-205ENST00000470232 MROH2AA6NES4 1674 aa14.68□□□□□ -0.06
SYNGAP1-205ENST00000470232 CDC42BPBQ9Y5S2 1711 aa14.68□□□□□ -0.06
SYNGAP1-205ENST00000470232 PLA2R1Q13018 1463 aa14.68□□□□□ -0.06
SYNGAP1-205ENST00000470232 HSPA1LP34931 641 aa14.66□□□□□ -0.06
SYNGAP1-205ENST00000470232 PIP4K2BP78356 416 aa14.66□□□□□ -0.06
SYNGAP1-205ENST00000470232 ABCC1P33527 1531 aa14.66□□□□□ -0.06
SYNGAP1-205ENST00000470232 KIDINS220Q9ULH0 1771 aa14.65□□□□□ -0.06
SYNGAP1-205ENST00000470232 SPAG9O60271 1321 aaKnown RBP14.65□□□□□ -0.06
SYNGAP1-205ENST00000470232 SUPT6HQ7KZ85 1726 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-205ENST00000470232 ZNF777Q9ULD5 760 aaPredicted RBP14.64□□□□□ -0.07
SYNGAP1-205ENST00000470232 ITSN2Q9NZM3 1697 aa14.64□□□□□ -0.07
SYNGAP1-205ENST00000470232 TCOF1Q13428 1488 aaKnown RBP14.63□□□□□ -0.07
SYNGAP1-205ENST00000470232 PREX2Q70Z35 1606 aa14.63□□□□□ -0.07
SYNGAP1-205ENST00000470232 GGT6Q6P531 493 aa14.62□□□□□ -0.07
SYNGAP1-205ENST00000470232 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
SYNGAP1-205ENST00000470232 ARHGAP35Q9NRY4 1499 aa14.62□□□□□ -0.07
SYNGAP1-205ENST00000470232 MED1Q15648 1581 aaPredicted RBP14.61□□□□□ -0.07
SYNGAP1-205ENST00000470232 ZNF142P52746 1687 aaPredicted RBP14.61□□□□□ -0.07
SYNGAP1-205ENST00000470232 CEP170BQ9Y4F5 1589 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-205ENST00000470232 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
SYNGAP1-205ENST00000470232 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
SYNGAP1-205ENST00000470232 HNRNPMP52272 730 aaKnown RBP eCLIP14.59□□□□□ -0.07
SYNGAP1-205ENST00000470232 SAMD9LQ8IVG5 1584 aa14.59□□□□□ -0.07
SYNGAP1-205ENST00000470232 MYO3AQ8NEV4 1616 aa14.59□□□□□ -0.07
SYNGAP1-205ENST00000470232 CLTCQ00610 1675 aaKnown RBP14.58□□□□□ -0.07
SYNGAP1-205ENST00000470232 CPS1P31327 1500 aa14.58□□□□□ -0.08
SYNGAP1-205ENST00000470232 A2ML1A8K2U0 1454 aa14.56□□□□□ -0.08
SYNGAP1-205ENST00000470232 A2MP01023 1474 aa14.56□□□□□ -0.08
SYNGAP1-205ENST00000470232 ANKLE2Q86XL3 938 aa14.55□□□□□ -0.08
SYNGAP1-205ENST00000470232 PLEKHH2Q8IVE3 1493 aa14.55□□□□□ -0.08
SYNGAP1-205ENST00000470232 SHANK2Q9UPX8 1470 aa14.55□□□□□ -0.08
SYNGAP1-205ENST00000470232 CDC42BPAQ5VT25 1732 aa14.55□□□□□ -0.08
SYNGAP1-205ENST00000470232 CFDP1Q9UEE9 299 aaPredicted RBP14.54□□□□□ -0.08
SYNGAP1-205ENST00000470232 KIAA1107Q9UPP5 1409 aa14.54□□□□□ -0.08
SYNGAP1-205ENST00000470232 LRRIQ1Q96JM4 1722 aa14.54□□□□□ -0.08
SYNGAP1-205ENST00000470232 ATP7AQ04656 1500 aa14.53□□□□□ -0.08
SYNGAP1-205ENST00000470232 CASKIN1Q8WXD9 1431 aa14.53□□□□□ -0.08
SYNGAP1-205ENST00000470232 THEMISQ8N1K5 641 aaPredicted RBP14.53□□□□□ -0.08
SYNGAP1-205ENST00000470232 SYCP2Q9BX26 1530 aa14.52□□□□□ -0.08
SYNGAP1-205ENST00000470232 DNMT1P26358 1616 aaKnown RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms