RNA–Protein interactions for RNA: ENST00000470180.2

C1orf43-207, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 5

Gene C1orf43, Length 1,861 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-207ENST00000470180 ZCCHC11Q5TAX3 1644 aaKnown RBP25.03■■□□□ 1.6
C1orf43-207ENST00000470180 MAPKBP1O60336 1514 aa25.03■■□□□ 1.6
C1orf43-207ENST00000470180 RRP7BPQ9NSQ0 103 aa25.02■■□□□ 1.6
C1orf43-207ENST00000470180 AKNAQ7Z591 1439 aa25.02■■□□□ 1.6
C1orf43-207ENST00000470180 GCC2Q8IWJ2 1684 aa24.99■■□□□ 1.59
C1orf43-207ENST00000470180 ZNF777Q9ULD5 760 aaPredicted RBP24.99■■□□□ 1.59
C1orf43-207ENST00000470180 ROCK1Q13464 1354 aa24.97■■□□□ 1.59
C1orf43-207ENST00000470180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.95■■□□□ 1.595e-8■■■□□ 14.8
C1orf43-207ENST00000470180 CDC42BPBQ9Y5S2 1711 aa24.95■■□□□ 1.58
C1orf43-207ENST00000470180 KDM6BO15054 1643 aa24.93■■□□□ 1.58
C1orf43-207ENST00000470180 TTC37Q6PGP7 1564 aa24.93■■□□□ 1.58
C1orf43-207ENST00000470180 PREX2Q70Z35 1606 aa24.93■■□□□ 1.58
C1orf43-207ENST00000470180 KCNH8Q96L42 1107 aa24.9■■□□□ 1.58
C1orf43-207ENST00000470180 CROCC2H7BZ55 1655 aa24.9■■□□□ 1.58
C1orf43-207ENST00000470180 SAMD9LQ8IVG5 1584 aa24.86■■□□□ 1.57
C1orf43-207ENST00000470180 NCOA1Q15788 1441 aa24.85■■□□□ 1.57
C1orf43-207ENST00000470180 ADGRL2O95490 1459 aa24.85■■□□□ 1.57
C1orf43-207ENST00000470180 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
C1orf43-207ENST00000470180 MBD5Q9P267 1494 aa24.84■■□□□ 1.57
C1orf43-207ENST00000470180 MYO5CQ9NQX4 1742 aa24.84■■□□□ 1.57
C1orf43-207ENST00000470180 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
C1orf43-207ENST00000470180 SIN3AQ96ST3 1273 aa24.82■■□□□ 1.56
C1orf43-207ENST00000470180 ARHGEF5Q12774 1597 aa24.82■■□□□ 1.56
C1orf43-207ENST00000470180 ARHGAP5Q13017 1502 aa24.8■■□□□ 1.56
C1orf43-207ENST00000470180 SHANK2Q9UPX8 1470 aa24.79■■□□□ 1.56
C1orf43-207ENST00000470180 PLCH2O75038 1416 aa24.79■■□□□ 1.56
C1orf43-207ENST00000470180 WDR7Q9Y4E6 1490 aa24.78■■□□□ 1.56
C1orf43-207ENST00000470180 ANKRD30AQ9BXX3 1397 aa24.77■■□□□ 1.56
C1orf43-207ENST00000470180 TRIM52Q96A61 297 aa24.77■■□□□ 1.56
C1orf43-207ENST00000470180 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
C1orf43-207ENST00000470180 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
C1orf43-207ENST00000470180 TSPY4P0CV99 314 aa24.75■■□□□ 1.55
C1orf43-207ENST00000470180 TSPY10P0CW01 314 aa24.75■■□□□ 1.55
C1orf43-207ENST00000470180 NEUROD1Q13562 356 aa24.74■■□□□ 1.55
C1orf43-207ENST00000470180 RSPH4AQ5TD94 716 aa24.74■■□□□ 1.55
C1orf43-207ENST00000470180 CCDC141Q6ZP82 1450 aa24.73■■□□□ 1.55
C1orf43-207ENST00000470180 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
C1orf43-207ENST00000470180 ASXL2Q76L83 1435 aa24.73■■□□□ 1.55
C1orf43-207ENST00000470180 SYCP2Q9BX26 1530 aa24.73■■□□□ 1.55
C1orf43-207ENST00000470180 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
C1orf43-207ENST00000470180 ZNF316A6NFI3 1004 aaPredicted RBP24.71■■□□□ 1.55
C1orf43-207ENST00000470180 MPHOSPH9Q99550 1183 aa24.71■■□□□ 1.55
C1orf43-207ENST00000470180 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.54
C1orf43-207ENST00000470180 PLEKHH2Q8IVE3 1493 aa24.69■■□□□ 1.54
C1orf43-207ENST00000470180 ARHGEF12Q9NZN5 1544 aa24.69■■□□□ 1.54
C1orf43-207ENST00000470180 TIMELESSQ9UNS1 1208 aa24.68■■□□□ 1.54
C1orf43-207ENST00000470180 ABCA9Q8IUA7 1624 aa24.67■■□□□ 1.54
C1orf43-207ENST00000470180 NPM1P06748 294 aaKnown RBP eCLIP24.67■■□□□ 1.54
C1orf43-207ENST00000470180 ARAP3Q8WWN8 1544 aa24.67■■□□□ 1.54
C1orf43-207ENST00000470180 ANKRD50Q9ULJ7 1429 aa24.66■■□□□ 1.54
C1orf43-207ENST00000470180 MAST1Q9Y2H9 1570 aa24.64■■□□□ 1.54
C1orf43-207ENST00000470180 ABCC1P33527 1531 aa24.62■■□□□ 1.53
C1orf43-207ENST00000470180 KIF15Q9NS87 1388 aa24.62■■□□□ 1.53
C1orf43-207ENST00000470180 PZPP20742 1482 aa24.61■■□□□ 1.53
C1orf43-207ENST00000470180 FOXD1Q16676 465 aa24.58■■□□□ 1.52
C1orf43-207ENST00000470180 RIMBP3CA6NJZ7 1639 aa24.57■■□□□ 1.52
C1orf43-207ENST00000470180 RIMBP3BA6NNM3 1639 aa24.57■■□□□ 1.52
C1orf43-207ENST00000470180 RIMBP3Q9UFD9 1639 aa24.57■■□□□ 1.52
C1orf43-207ENST00000470180 SLC4A1APQ9BWU0 796 aaKnown RBP24.57■■□□□ 1.52
C1orf43-207ENST00000470180 TRAPPC8Q9Y2L5 1435 aa24.56■■□□□ 1.52
C1orf43-207ENST00000470180 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
C1orf43-207ENST00000470180 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
C1orf43-207ENST00000470180 FANCAO15360 1455 aa24.54■■□□□ 1.52
C1orf43-207ENST00000470180 CYB5RLQ6IPT4 315 aa24.53■■□□□ 1.52
C1orf43-207ENST00000470180 PLXNC1O60486 1568 aa24.53■■□□□ 1.52
C1orf43-207ENST00000470180 TONSLQ96HA7 1378 aa24.52■■□□□ 1.52
C1orf43-207ENST00000470180 DIEXFQ68CQ4 756 aaKnown RBP24.51■■□□□ 1.51
C1orf43-207ENST00000470180 AFAP1Q8N556 730 aa24.49■■□□□ 1.51
C1orf43-207ENST00000470180 KDM5DQ9BY66 1539 aa24.49■■□□□ 1.51
C1orf43-207ENST00000470180 NUP155O75694 1391 aa24.48■■□□□ 1.51
C1orf43-207ENST00000470180 CD109Q6YHK3 1445 aa24.45■■□□□ 1.5
C1orf43-207ENST00000470180 PKD2Q13563 968 aa24.45■■□□□ 1.5
C1orf43-207ENST00000470180 DUOX2Q9NRD8 1548 aa24.44■■□□□ 1.5
C1orf43-207ENST00000470180 RTEL1-TNFRSF6BF6WH68 1400 aa24.44■■□□□ 1.5
C1orf43-207ENST00000470180 SCAPERQ9BY12 1400 aa24.43■■□□□ 1.5
C1orf43-207ENST00000470180 SPAG9O60271 1321 aaKnown RBP24.43■■□□□ 1.5
C1orf43-207ENST00000470180 ADGRL1O94910 1474 aa24.43■■□□□ 1.5
C1orf43-207ENST00000470180 RPRD2Q5VT52 1461 aaKnown RBP24.42■■□□□ 1.5
C1orf43-207ENST00000470180 ZFYVE16Q7Z3T8 1539 aa24.4■■□□□ 1.5
C1orf43-207ENST00000470180 UNC13BO14795 1591 aa24.39■■□□□ 1.5
C1orf43-207ENST00000470180 ERBINQ96RT1 1412 aa24.38■■□□□ 1.49
C1orf43-207ENST00000470180 INO80Q9ULG1 1556 aaPredicted RBP24.36■■□□□ 1.49
C1orf43-207ENST00000470180 FAM135AQ9P2D6 1515 aa24.36■■□□□ 1.49
C1orf43-207ENST00000470180 L3MBTL2Q969R5 705 aa24.35■■□□□ 1.49
C1orf43-207ENST00000470180 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
C1orf43-207ENST00000470180 CFAP74Q9C0B2 1584 aa24.34■■□□□ 1.49
C1orf43-207ENST00000470180 MAGI2Q86UL8 1455 aa24.31■■□□□ 1.48
C1orf43-207ENST00000470180 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
C1orf43-207ENST00000470180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.3■■□□□ 1.48
C1orf43-207ENST00000470180 IQGAP3Q86VI3 1631 aa24.3■■□□□ 1.48
C1orf43-207ENST00000470180 GLI2P10070 1586 aa24.29■■□□□ 1.48
C1orf43-207ENST00000470180 MAP3K4Q9Y6R4 1608 aa24.29■■□□□ 1.48
C1orf43-207ENST00000470180 ZNF518AQ6AHZ1 1483 aa24.28■■□□□ 1.48
C1orf43-207ENST00000470180 KIDINS220Q9ULH0 1771 aa24.28■■□□□ 1.48
C1orf43-207ENST00000470180 NEO1Q92859 1461 aa24.26■■□□□ 1.47
C1orf43-207ENST00000470180 POGZQ7Z3K3 1410 aa24.24■■□□□ 1.47
C1orf43-207ENST00000470180 KDM5CP41229 1560 aa24.23■■□□□ 1.47
C1orf43-207ENST00000470180 DHX29Q7Z478 1369 aaKnown RBP24.23■■□□□ 1.47
C1orf43-207ENST00000470180 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
C1orf43-207ENST00000470180 NBPF8Q3BBV2 869 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms