RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ANKRD13DQ6ZTN6 518 aa13.57□□□□□ -0.24
VPS8-219ENST00000469479 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
VPS8-219ENST00000469479 ZFP91Q96JP5 570 aaPredicted RBP13.54□□□□□ -0.24
VPS8-219ENST00000469479 RNF25Q96BH1 459 aaPredicted RBP13.53□□□□□ -0.24
VPS8-219ENST00000469479 TMEM92Q6UXU6 159 aa13.52□□□□□ -0.25
VPS8-219ENST00000469479 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
VPS8-219ENST00000469479 TAOK2Q9UL54 1235 aa13.49□□□□□ -0.25
VPS8-219ENST00000469479 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
VPS8-219ENST00000469479 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
VPS8-219ENST00000469479 NLRP6P59044 892 aa13.45□□□□□ -0.26
VPS8-219ENST00000469479 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS8-219ENST00000469479 ZNF316A6NFI3 1004 aaPredicted RBP13.43□□□□□ -0.26
VPS8-219ENST00000469479 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
VPS8-219ENST00000469479 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
VPS8-219ENST00000469479 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
VPS8-219ENST00000469479 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.276e-7■■□□□ 13
VPS8-219ENST00000469479 HCSTQ9UBK5 93 aa13.33□□□□□ -0.28
VPS8-219ENST00000469479 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
VPS8-219ENST00000469479 PBX2P40425 430 aa13.32□□□□□ -0.28
VPS8-219ENST00000469479 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
VPS8-219ENST00000469479 STK25O00506 426 aa13.27□□□□□ -0.29
VPS8-219ENST00000469479 KIF3CO14782 793 aa13.23□□□□□ -0.29
VPS8-219ENST00000469479 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
VPS8-219ENST00000469479 ECM2O94769 699 aaPredicted RBP13.22□□□□□ -0.29
VPS8-219ENST00000469479 NUDT7P0C024 238 aa13.22□□□□□ -0.29
VPS8-219ENST00000469479 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
VPS8-219ENST00000469479 LHX6Q9UPM6 363 aa13.19□□□□□ -0.3
VPS8-219ENST00000469479 SLC34A2O95436 690 aa13.18□□□□□ -0.3
VPS8-219ENST00000469479 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
VPS8-219ENST00000469479 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
VPS8-219ENST00000469479 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
VPS8-219ENST00000469479 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
VPS8-219ENST00000469479 ARHGAP33O14559 1287 aa13.11□□□□□ -0.31
VPS8-219ENST00000469479 RGL2O15211 777 aa13.08□□□□□ -0.32
VPS8-219ENST00000469479 PKD2Q13563 968 aa13.07□□□□□ -0.32
VPS8-219ENST00000469479 PSDA5PKW4 1024 aaPredicted RBP13.06□□□□□ -0.32
VPS8-219ENST00000469479 TK2O00142 265 aa13.03□□□□□ -0.32
VPS8-219ENST00000469479 STAC3Q96MF2 364 aa13.02□□□□□ -0.33
VPS8-219ENST00000469479 KCTD12Q96CX2 325 aaKnown RBP13.01□□□□□ -0.33
VPS8-219ENST00000469479 PPP1R37O75864 691 aa13□□□□□ -0.33
VPS8-219ENST00000469479 HRO43593 1189 aa12.99□□□□□ -0.33
VPS8-219ENST00000469479 PTCD2Q8WV60 388 aaKnown RBP12.97□□□□□ -0.33
VPS8-219ENST00000469479 RGS20O76081 388 aa12.95□□□□□ -0.34
VPS8-219ENST00000469479 DMRTA1Q5VZB9 504 aa12.95□□□□□ -0.34
VPS8-219ENST00000469479 KDM4FA0A1W2PPD8 638 aa12.94□□□□□ -0.34
VPS8-219ENST00000469479 PSEN2P49810 448 aa12.94□□□□□ -0.34
VPS8-219ENST00000469479 FOXK1P85037 733 aa12.94□□□□□ -0.34
VPS8-219ENST00000469479 IRX2Q9BZI1 471 aaPredicted RBP12.94□□□□□ -0.34
VPS8-219ENST00000469479 TBC1D12O60347 775 aa12.91□□□□□ -0.34
VPS8-219ENST00000469479 PLPP6Q8IY26 295 aa12.9□□□□□ -0.34
VPS8-219ENST00000469479 GPHNQ9NQX3 736 aaPredicted RBP12.9□□□□□ -0.34
VPS8-219ENST00000469479 PTPN5P54829 565 aa12.88□□□□□ -0.35
VPS8-219ENST00000469479 PPP4R3BQ5MIZ7 849 aa12.87□□□□□ -0.35
VPS8-219ENST00000469479 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
VPS8-219ENST00000469479 KCNH8Q96L42 1107 aa12.85□□□□□ -0.35
VPS8-219ENST00000469479 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
VPS8-219ENST00000469479 DSG2Q14126 1118 aa12.83□□□□□ -0.36
VPS8-219ENST00000469479 KCNK17Q96T54 332 aa12.79□□□□□ -0.36
VPS8-219ENST00000469479 RYDENQ9NUL5 291 aaKnown RBP12.78□□□□□ -0.36
VPS8-219ENST00000469479 A0A0G2JS52 829 aa12.76□□□□□ -0.37
VPS8-219ENST00000469479 VPS9D1Q9Y2B5 631 aa12.76□□□□□ -0.37
VPS8-219ENST00000469479 CHGAP10645 457 aaKnown RBP12.75□□□□□ -0.37
VPS8-219ENST00000469479 OXER1Q8TDS5 423 aa12.73□□□□□ -0.37
VPS8-219ENST00000469479 DNAJC5Q9H3Z4 198 aa12.73□□□□□ -0.37
VPS8-219ENST00000469479 GOLGA8CPA6NN73 597 aa12.7□□□□□ -0.38
VPS8-219ENST00000469479 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
VPS8-219ENST00000469479 SLC4A5Q9BY07 1137 aa12.68□□□□□ -0.38
VPS8-219ENST00000469479 CRISPLD2Q9H0B8 497 aa12.68□□□□□ -0.38
VPS8-219ENST00000469479 ZNF454Q8N9F8 522 aa12.67□□□□□ -0.38
VPS8-219ENST00000469479 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
VPS8-219ENST00000469479 BCL2L12Q9HB09 334 aa12.67□□□□□ -0.38
VPS8-219ENST00000469479 WNT2BQ93097 391 aa12.65□□□□□ -0.38
VPS8-219ENST00000469479 NKX1-1Q15270 411 aaPredicted RBP12.64□□□□□ -0.39
VPS8-219ENST00000469479 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
VPS8-219ENST00000469479 Q6ZNB5 142 aa12.63□□□□□ -0.39
VPS8-219ENST00000469479 BHMG1C9JSJ3 638 aaPredicted RBP12.62□□□□□ -0.39
VPS8-219ENST00000469479 PDE4AP27815 886 aa12.62□□□□□ -0.39
VPS8-219ENST00000469479 PTPREP23469 700 aa12.61□□□□□ -0.39
VPS8-219ENST00000469479 FOSBP53539 338 aa12.61□□□□□ -0.39
VPS8-219ENST00000469479 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
VPS8-219ENST00000469479 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
VPS8-219ENST00000469479 JPH4Q96JJ6 628 aa12.56□□□□□ -0.4
VPS8-219ENST00000469479 ZBED2Q9BTP6 218 aa12.55□□□□□ -0.4
VPS8-219ENST00000469479 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
VPS8-219ENST00000469479 EVI5O60447 810 aa12.54□□□□□ -0.4
VPS8-219ENST00000469479 ZDHHC16Q969W1 377 aa12.54□□□□□ -0.4
VPS8-219ENST00000469479 NBPF3Q9H094 633 aa12.53□□□□□ -0.4
VPS8-219ENST00000469479 MAP3K9P80192 1104 aa12.49□□□□□ -0.41
VPS8-219ENST00000469479 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
VPS8-219ENST00000469479 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
VPS8-219ENST00000469479 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
VPS8-219ENST00000469479 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
VPS8-219ENST00000469479 GTPBP6O43824 516 aaPredicted RBP12.46□□□□□ -0.41
VPS8-219ENST00000469479 MFSD10Q14728 455 aa12.44□□□□□ -0.42
VPS8-219ENST00000469479 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
VPS8-219ENST00000469479 ANKK1Q8NFD2 765 aa12.43□□□□□ -0.42
VPS8-219ENST00000469479 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
VPS8-219ENST00000469479 RABGEF1Q9UJ41 708 aa12.41□□□□□ -0.42
VPS8-219ENST00000469479 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
VPS8-219ENST00000469479 PCDHGA10Q9Y5H3 936 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms