RNA–Protein interactions for RNA: ENST00000468822.5

SRRM1-207, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 768 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-207ENST00000468822 PLCH2O75038 1416 aa25.92■■□□□ 1.74
SRRM1-207ENST00000468822 SCAPERQ9BY12 1400 aa25.92■■□□□ 1.74
SRRM1-207ENST00000468822 EHMT2Q96KQ7 1210 aa25.86■■□□□ 1.73
SRRM1-207ENST00000468822 FER1L4A9Z1Z3 1794 aa25.85■■□□□ 1.73
SRRM1-207ENST00000468822 ATP10AO60312 1499 aa25.83■■□□□ 1.73
SRRM1-207ENST00000468822 ARHGEF12Q9NZN5 1544 aa25.83■■□□□ 1.72
SRRM1-207ENST00000468822 KIF14Q15058 1648 aa25.81■■□□□ 1.72
SRRM1-207ENST00000468822 ATP1B4Q9UN42 357 aaPredicted RBP25.81■■□□□ 1.72
SRRM1-207ENST00000468822 ARHGAP35Q9NRY4 1499 aa25.8■■□□□ 1.72
SRRM1-207ENST00000468822 EFCAB2Q5VUJ9 269 aa25.79■■□□□ 1.72
SRRM1-207ENST00000468822 C9orf84Q5VXU9 1444 aa25.79■■□□□ 1.72
SRRM1-207ENST00000468822 MYO5CQ9NQX4 1742 aa25.78■■□□□ 1.72
SRRM1-207ENST00000468822 CEBPAP49715 358 aaPredicted RBP25.78■■□□□ 1.72
SRRM1-207ENST00000468822 CERKQ8TCT0 537 aa25.77■■□□□ 1.72
SRRM1-207ENST00000468822 FMN1Q68DA7 1419 aa25.77■■□□□ 1.72
SRRM1-207ENST00000468822 UBTFP17480 764 aaKnown RBP25.76■■□□□ 1.71
SRRM1-207ENST00000468822 AFAP1Q8N556 730 aa25.74■■□□□ 1.71
SRRM1-207ENST00000468822 TROQ12816 1431 aaPredicted RBP25.71■■□□□ 1.71
SRRM1-207ENST00000468822 KDM5CP41229 1560 aa25.71■■□□□ 1.71
SRRM1-207ENST00000468822 ZNF518AQ6AHZ1 1483 aa25.71■■□□□ 1.71
SRRM1-207ENST00000468822 LRRIQ1Q96JM4 1722 aa25.7■■□□□ 1.7
SRRM1-207ENST00000468822 PREX1Q8TCU6 1659 aa25.7■■□□□ 1.7
SRRM1-207ENST00000468822 ARHGAP5Q13017 1502 aa25.69■■□□□ 1.7
SRRM1-207ENST00000468822 CDK11AQ9UQ88 783 aaPredicted RBP25.69■■□□□ 1.7
SRRM1-207ENST00000468822 DIP2CQ9Y2E4 1556 aa25.66■■□□□ 1.7
SRRM1-207ENST00000468822 STRCQ7RTU9 1775 aa25.64■■□□□ 1.7
SRRM1-207ENST00000468822 CDC42BPBQ9Y5S2 1711 aa25.62■■□□□ 1.69
SRRM1-207ENST00000468822 ABCA6Q8N139 1617 aa25.62■■□□□ 1.69
SRRM1-207ENST00000468822 CLIP1P30622 1438 aa25.61■■□□□ 1.69
SRRM1-207ENST00000468822 TRAPPC8Q9Y2L5 1435 aa25.6■■□□□ 1.69
SRRM1-207ENST00000468822 REREQ9P2R6 1566 aa25.6■■□□□ 1.69
SRRM1-207ENST00000468822 MLH3Q9UHC1 1453 aa25.59■■□□□ 1.69
SRRM1-207ENST00000468822 MYT1LQ9UL68 1186 aa25.58■■□□□ 1.69
SRRM1-207ENST00000468822 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
SRRM1-207ENST00000468822 ABCC1P33527 1531 aa25.56■■□□□ 1.68
SRRM1-207ENST00000468822 PREX2Q70Z35 1606 aa25.55■■□□□ 1.68
SRRM1-207ENST00000468822 C3P01024 1663 aa25.55■■□□□ 1.68
SRRM1-207ENST00000468822 SETD1BQ9UPS6 1966 aaKnown RBP25.53■■□□□ 1.68
SRRM1-207ENST00000468822 AGLP35573 1532 aa25.52■■□□□ 1.68
SRRM1-207ENST00000468822 DMRT2Q9Y5R5 561 aa25.51■■□□□ 1.67
SRRM1-207ENST00000468822 ITSN2Q9NZM3 1697 aa25.51■■□□□ 1.67
SRRM1-207ENST00000468822 CASKIN1Q8WXD9 1431 aa25.5■■□□□ 1.67
SRRM1-207ENST00000468822 KIDINS220Q9ULH0 1771 aa25.49■■□□□ 1.67
SRRM1-207ENST00000468822 CCDC18Q5T9S5 1454 aa25.46■■□□□ 1.67
SRRM1-207ENST00000468822 CDC42BPAQ5VT25 1732 aa25.46■■□□□ 1.67
SRRM1-207ENST00000468822 PTPRTO14522 1441 aa25.46■■□□□ 1.67
SRRM1-207ENST00000468822 ILDR2Q71H61 639 aa25.43■■□□□ 1.66
SRRM1-207ENST00000468822 SAMD9LQ8IVG5 1584 aa25.41■■□□□ 1.66
SRRM1-207ENST00000468822 SENP3Q9H4L4 574 aaPredicted RBP25.41■■□□□ 1.66
SRRM1-207ENST00000468822 ESF1Q9H501 851 aaKnown RBP25.41■■□□□ 1.66
SRRM1-207ENST00000468822 LTBP4Q8N2S1 1624 aa25.41■■□□□ 1.66
SRRM1-207ENST00000468822 NCOA1Q15788 1441 aa25.39■■□□□ 1.66
SRRM1-207ENST00000468822 DISP3Q9P2K9 1392 aa25.39■■□□□ 1.65
SRRM1-207ENST00000468822 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
SRRM1-207ENST00000468822 CNTLNQ9NXG0 1405 aa25.37■■□□□ 1.65
SRRM1-207ENST00000468822 SYCP2Q9BX26 1530 aa25.37■■□□□ 1.65
SRRM1-207ENST00000468822 GPATCH8Q9UKJ3 1502 aaKnown RBP25.37■■□□□ 1.65
SRRM1-207ENST00000468822 FYCO1Q9BQS8 1478 aa25.36■■□□□ 1.65
SRRM1-207ENST00000468822 HNRNPMP52272 730 aaKnown RBP eCLIP25.35■■□□□ 1.65
SRRM1-207ENST00000468822 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
SRRM1-207ENST00000468822 SPAG9O60271 1321 aaKnown RBP25.32■■□□□ 1.64
SRRM1-207ENST00000468822 NPATQ14207 1427 aa25.31■■□□□ 1.64
SRRM1-207ENST00000468822 CAMSAP1Q5T5Y3 1602 aa25.31■■□□□ 1.64
SRRM1-207ENST00000468822 MROH2AA6NES4 1674 aa25.3■■□□□ 1.64
SRRM1-207ENST00000468822 SUPT6HQ7KZ85 1726 aaKnown RBP25.29■■□□□ 1.64
SRRM1-207ENST00000468822 ATP7AQ04656 1500 aa25.27■■□□□ 1.64
SRRM1-207ENST00000468822 PLXNC1O60486 1568 aa25.27■■□□□ 1.64
SRRM1-207ENST00000468822 NCKAP5LQ9HCH0 1330 aa25.27■■□□□ 1.64
SRRM1-207ENST00000468822 INO80Q9ULG1 1556 aaPredicted RBP25.27■■□□□ 1.64
SRRM1-207ENST00000468822 KIAA1107Q9UPP5 1409 aa25.25■■□□□ 1.63
SRRM1-207ENST00000468822 CLTCQ00610 1675 aaKnown RBP25.25■■□□□ 1.63
SRRM1-207ENST00000468822 IQSEC2Q5JU85 1478 aa25.24■■□□□ 1.63
SRRM1-207ENST00000468822 A2MP01023 1474 aa25.23■■□□□ 1.63
SRRM1-207ENST00000468822 SOCS7O14512 581 aa25.23■■□□□ 1.63
SRRM1-207ENST00000468822 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
SRRM1-207ENST00000468822 CFDP1Q9UEE9 299 aaPredicted RBP25.23■■□□□ 1.63
SRRM1-207ENST00000468822 SPATA31D1Q6ZQQ2 1576 aa25.22■■□□□ 1.63
SRRM1-207ENST00000468822 PTPRKQ15262 1439 aa25.22■■□□□ 1.63
SRRM1-207ENST00000468822 ZNF335Q9H4Z2 1342 aaPredicted RBP25.22■■□□□ 1.63
SRRM1-207ENST00000468822 MYO3AQ8NEV4 1616 aa25.2■■□□□ 1.62
SRRM1-207ENST00000468822 CCNB3Q8WWL7 1395 aa25.19■■□□□ 1.62
SRRM1-207ENST00000468822 ZNF644Q9H582 1327 aaPredicted RBP25.19■■□□□ 1.62
SRRM1-207ENST00000468822 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
SRRM1-207ENST00000468822 ZNF142P52746 1687 aaPredicted RBP25.18■■□□□ 1.62
SRRM1-207ENST00000468822 GGT6Q6P531 493 aa25.18■■□□□ 1.62
SRRM1-207ENST00000468822 CEP170BQ9Y4F5 1589 aaPredicted RBP25.17■■□□□ 1.62
SRRM1-207ENST00000468822 TCOF1Q13428 1488 aaKnown RBP25.16■■□□□ 1.62
SRRM1-207ENST00000468822 PLA2R1Q13018 1463 aa25.15■■□□□ 1.62
SRRM1-207ENST00000468822 MBD5Q9P267 1494 aa25.13■■□□□ 1.61
SRRM1-207ENST00000468822 MTUS2Q5JR59 1369 aa25.12■■□□□ 1.61
SRRM1-207ENST00000468822 TIAM1Q13009 1591 aa25.12■■□□□ 1.61
SRRM1-207ENST00000468822 PKD2Q13563 968 aa25.11■■□□□ 1.61
SRRM1-207ENST00000468822 ADGBQ8N7X0 1667 aa25.1■■□□□ 1.61
SRRM1-207ENST00000468822 UBAP1LF5GYI3 381 aa25.09■■□□□ 1.61
SRRM1-207ENST00000468822 PPP6R1Q9UPN7 881 aa25.06■■□□□ 1.6
SRRM1-207ENST00000468822 A2ML1A8K2U0 1454 aa25.05■■□□□ 1.6
SRRM1-207ENST00000468822 DNMT1P26358 1616 aaKnown RBP25.04■■□□□ 1.6
SRRM1-207ENST00000468822 FBXO31Q5XUX0 539 aaPredicted RBP25.03■■□□□ 1.6
SRRM1-207ENST00000468822 DHX29Q7Z478 1369 aaKnown RBP25.03■■□□□ 1.6
SRRM1-207ENST00000468822 RTEL1-TNFRSF6BF6WH68 1400 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms