RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 ATP10AO60312 1499 aa20.52■□□□□ 0.88
UBR4-211ENST00000467272 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
UBR4-211ENST00000467272 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
UBR4-211ENST00000467272 ARHGAP35Q9NRY4 1499 aa20.47■□□□□ 0.87
UBR4-211ENST00000467272 EFCAB2Q5VUJ9 269 aa20.46■□□□□ 0.87
UBR4-211ENST00000467272 KDM5CP41229 1560 aa20.46■□□□□ 0.87
UBR4-211ENST00000467272 FER1L4A9Z1Z3 1794 aa20.45■□□□□ 0.86
UBR4-211ENST00000467272 CERKQ8TCT0 537 aa20.44■□□□□ 0.86
UBR4-211ENST00000467272 KIF14Q15058 1648 aa20.43■□□□□ 0.86
UBR4-211ENST00000467272 ZNF518AQ6AHZ1 1483 aa20.43■□□□□ 0.86
UBR4-211ENST00000467272 MLECQ14165 292 aa20.42■□□□□ 0.86
UBR4-211ENST00000467272 TROQ12816 1431 aaPredicted RBP20.42■□□□□ 0.86
UBR4-211ENST00000467272 MYO5CQ9NQX4 1742 aa20.41■□□□□ 0.86
UBR4-211ENST00000467272 REREQ9P2R6 1566 aa20.4■□□□□ 0.86
UBR4-211ENST00000467272 AFAP1Q8N556 730 aa20.39■□□□□ 0.85
UBR4-211ENST00000467272 PREX1Q8TCU6 1659 aa20.38■□□□□ 0.85
UBR4-211ENST00000467272 CEBPAP49715 358 aaPredicted RBP20.38■□□□□ 0.85
UBR4-211ENST00000467272 CDK11AQ9UQ88 783 aaPredicted RBP20.38■□□□□ 0.85
UBR4-211ENST00000467272 MLH3Q9UHC1 1453 aa20.37■□□□□ 0.85
UBR4-211ENST00000467272 PLPPR3Q6T4P5 718 aa20.37■□□□□ 0.85
UBR4-211ENST00000467272 DIP2CQ9Y2E4 1556 aa20.37■□□□□ 0.85
UBR4-211ENST00000467272 STRCQ7RTU9 1775 aa20.35■□□□□ 0.85
UBR4-211ENST00000467272 LRRIQ1Q96JM4 1722 aa20.33■□□□□ 0.85
UBR4-211ENST00000467272 AGLP35573 1532 aa20.33■□□□□ 0.85
UBR4-211ENST00000467272 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.85
UBR4-211ENST00000467272 UBTFP17480 764 aaKnown RBP20.32■□□□□ 0.84
UBR4-211ENST00000467272 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
UBR4-211ENST00000467272 CLIP1P30622 1438 aa20.3■□□□□ 0.84
UBR4-211ENST00000467272 TRAPPC8Q9Y2L5 1435 aa20.3■□□□□ 0.84
UBR4-211ENST00000467272 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
UBR4-211ENST00000467272 ABCC1P33527 1531 aa20.29■□□□□ 0.84
UBR4-211ENST00000467272 UHRF1BP1Q6BDS2 1440 aa20.28■□□□□ 0.84
UBR4-211ENST00000467272 ATP1B4Q9UN42 357 aaPredicted RBP20.28■□□□□ 0.84
UBR4-211ENST00000467272 DMRT2Q9Y5R5 561 aa20.28■□□□□ 0.84
UBR4-211ENST00000467272 PTPRTO14522 1441 aa20.27■□□□□ 0.83
UBR4-211ENST00000467272 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.83
UBR4-211ENST00000467272 PREX2Q70Z35 1606 aa20.26■□□□□ 0.83
UBR4-211ENST00000467272 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
UBR4-211ENST00000467272 C3P01024 1663 aa20.24■□□□□ 0.83
UBR4-211ENST00000467272 KIDINS220Q9ULH0 1771 aa20.22■□□□□ 0.83
UBR4-211ENST00000467272 CHIC1Q5VXU3 224 aa20.22■□□□□ 0.83
UBR4-211ENST00000467272 CCDC18Q5T9S5 1454 aa20.22■□□□□ 0.83
UBR4-211ENST00000467272 LTBP4Q8N2S1 1624 aa20.21■□□□□ 0.83
UBR4-211ENST00000467272 EHMT2Q96KQ7 1210 aa20.21■□□□□ 0.83
UBR4-211ENST00000467272 ITSN2Q9NZM3 1697 aa20.21■□□□□ 0.83
UBR4-211ENST00000467272 NCOA1Q15788 1441 aa20.19■□□□□ 0.82
UBR4-211ENST00000467272 CNTLNQ9NXG0 1405 aa20.19■□□□□ 0.82
UBR4-211ENST00000467272 SAMD9LQ8IVG5 1584 aa20.17■□□□□ 0.82
UBR4-211ENST00000467272 NPATQ14207 1427 aa20.16■□□□□ 0.82
UBR4-211ENST00000467272 CDC42BPAQ5VT25 1732 aa20.16■□□□□ 0.82
UBR4-211ENST00000467272 IQSEC2Q5JU85 1478 aa20.15■□□□□ 0.82
UBR4-211ENST00000467272 GPATCH8Q9UKJ3 1502 aaKnown RBP20.14■□□□□ 0.81
UBR4-211ENST00000467272 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.81
UBR4-211ENST00000467272 ILDR2Q71H61 639 aa20.14■□□□□ 0.81
UBR4-211ENST00000467272 KIAA1107Q9UPP5 1409 aa20.11■□□□□ 0.81
UBR4-211ENST00000467272 MROH2AA6NES4 1674 aa20.11■□□□□ 0.81
UBR4-211ENST00000467272 MYT1LQ9UL68 1186 aa20.11■□□□□ 0.81
UBR4-211ENST00000467272 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
UBR4-211ENST00000467272 ZMYM3Q14202 1370 aa20.09■□□□□ 0.81
UBR4-211ENST00000467272 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
UBR4-211ENST00000467272 DISP3Q9P2K9 1392 aa20.08■□□□□ 0.8
UBR4-211ENST00000467272 ESF1Q9H501 851 aaKnown RBP20.07■□□□□ 0.8
UBR4-211ENST00000467272 INO80Q9ULG1 1556 aaPredicted RBP20.07■□□□□ 0.8
UBR4-211ENST00000467272 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
UBR4-211ENST00000467272 SPAG9O60271 1321 aaKnown RBP20.05■□□□□ 0.8
UBR4-211ENST00000467272 SOCS7O14512 581 aa20.05■□□□□ 0.8
UBR4-211ENST00000467272 HNRNPMP52272 730 aaKnown RBP eCLIP20.05■□□□□ 0.8
UBR4-211ENST00000467272 ATP7AQ04656 1500 aa20.05■□□□□ 0.8
UBR4-211ENST00000467272 PTPRKQ15262 1439 aa20.04■□□□□ 0.8
UBR4-211ENST00000467272 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
UBR4-211ENST00000467272 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
UBR4-211ENST00000467272 PLEKHH2Q8IVE3 1493 aa20.03■□□□□ 0.8
UBR4-211ENST00000467272 A2MP01023 1474 aa20.02■□□□□ 0.8
UBR4-211ENST00000467272 ZNF142P52746 1687 aaPredicted RBP20.01■□□□□ 0.79
UBR4-211ENST00000467272 ZNF777Q9ULD5 760 aaPredicted RBP20■□□□□ 0.79
UBR4-211ENST00000467272 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
UBR4-211ENST00000467272 PPP6R1Q9UPN7 881 aa19.99■□□□□ 0.79
UBR4-211ENST00000467272 NCKAP5LQ9HCH0 1330 aa19.99■□□□□ 0.79
UBR4-211ENST00000467272 CFDP1Q9UEE9 299 aaPredicted RBP19.98■□□□□ 0.79
UBR4-211ENST00000467272 SPATA31D1Q6ZQQ2 1576 aa19.98■□□□□ 0.79
UBR4-211ENST00000467272 MYO3AQ8NEV4 1616 aa19.98■□□□□ 0.79
UBR4-211ENST00000467272 SUPT6HQ7KZ85 1726 aaKnown RBP19.97■□□□□ 0.79
UBR4-211ENST00000467272 PKD2Q13563 968 aa19.97■□□□□ 0.79
UBR4-211ENST00000467272 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
UBR4-211ENST00000467272 CLTCQ00610 1675 aaKnown RBP19.97■□□□□ 0.79
UBR4-211ENST00000467272 CEP170BQ9Y4F5 1589 aaPredicted RBP19.96■□□□□ 0.79
UBR4-211ENST00000467272 CCNB3Q8WWL7 1395 aa19.95■□□□□ 0.79
UBR4-211ENST00000467272 ZNF644Q9H582 1327 aaPredicted RBP19.93■□□□□ 0.78
UBR4-211ENST00000467272 RTEL1-TNFRSF6BF6WH68 1400 aa19.93■□□□□ 0.78
UBR4-211ENST00000467272 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
UBR4-211ENST00000467272 ADGBQ8N7X0 1667 aa19.91■□□□□ 0.78
UBR4-211ENST00000467272 A2ML1A8K2U0 1454 aa19.9■□□□□ 0.78
UBR4-211ENST00000467272 GGT6Q6P531 493 aa19.89■□□□□ 0.77
UBR4-211ENST00000467272 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
UBR4-211ENST00000467272 MTUS2Q5JR59 1369 aa19.88■□□□□ 0.77
UBR4-211ENST00000467272 DNMT1P26358 1616 aaKnown RBP19.87■□□□□ 0.77
UBR4-211ENST00000467272 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
UBR4-211ENST00000467272 FAM135AQ9P2D6 1515 aa19.85■□□□□ 0.77
UBR4-211ENST00000467272 NEURL4Q96JN8 1562 aa19.84■□□□□ 0.77
UBR4-211ENST00000467272 UBAP1LF5GYI3 381 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms