RNA–Protein interactions for RNA: ENST00000467173.1

USP9X-206, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 3

Gene USP9X, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-206ENST00000467173 PKD2Q13563 968 aa13.44□□□□□ -0.26
USP9X-206ENST00000467173 TMEM92Q6UXU6 159 aa13.44□□□□□ -0.26
USP9X-206ENST00000467173 POTEB3A0JP26 581 aa13.41□□□□□ -0.26
USP9X-206ENST00000467173 POTEBQ6S5H4 581 aa13.41□□□□□ -0.26
USP9X-206ENST00000467173 MFRPQ9BY79 579 aa13.41□□□□□ -0.26
USP9X-206ENST00000467173 MMRN1Q13201 1228 aa13.4□□□□□ -0.26
USP9X-206ENST00000467173 ERBB3P21860 1342 aa13.39□□□□□ -0.27
USP9X-206ENST00000467173 RGL2O15211 777 aa13.39□□□□□ -0.27
USP9X-206ENST00000467173 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
USP9X-206ENST00000467173 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
USP9X-206ENST00000467173 GPR153Q6NV75 609 aa13.31□□□□□ -0.28
USP9X-206ENST00000467173 VARS2Q5ST30 1063 aaKnown RBP13.29□□□□□ -0.28
USP9X-206ENST00000467173 KIF3CO14782 793 aa13.25□□□□□ -0.29
USP9X-206ENST00000467173 C2orf72A6NCS6 295 aa13.23□□□□□ -0.29
USP9X-206ENST00000467173 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
USP9X-206ENST00000467173 ZNF687Q8N1G0 1237 aa13.23□□□□□ -0.29
USP9X-206ENST00000467173 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
USP9X-206ENST00000467173 HS6ST3Q8IZP7 471 aa13.19□□□□□ -0.3
USP9X-206ENST00000467173 ZNF316A6NFI3 1004 aaPredicted RBP13.16□□□□□ -0.3
USP9X-206ENST00000467173 SLC34A2O95436 690 aa13.16□□□□□ -0.3
USP9X-206ENST00000467173 PPP1R37O75864 691 aa13.13□□□□□ -0.31
USP9X-206ENST00000467173 KHSRPQ92945 711 aaKnown RBP eCLIP13.12□□□□□ -0.31
USP9X-206ENST00000467173 PTGER2P43116 358 aa13.09□□□□□ -0.31
USP9X-206ENST00000467173 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
USP9X-206ENST00000467173 CHGAP10645 457 aaKnown RBP13.08□□□□□ -0.32
USP9X-206ENST00000467173 NUDT7P0C024 238 aa13.07□□□□□ -0.32
USP9X-206ENST00000467173 RNF166Q96A37 237 aaPredicted RBP13.06□□□□□ -0.32
USP9X-206ENST00000467173 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
USP9X-206ENST00000467173 MYT1LQ9UL68 1186 aa13.05□□□□□ -0.32
USP9X-206ENST00000467173 PBX2P40425 430 aa13.04□□□□□ -0.32
USP9X-206ENST00000467173 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
USP9X-206ENST00000467173 FOXK1P85037 733 aa13.02□□□□□ -0.33
USP9X-206ENST00000467173 GPHNQ9NQX3 736 aaPredicted RBP13.02□□□□□ -0.33
USP9X-206ENST00000467173 LHX6Q9UPM6 363 aa13.02□□□□□ -0.33
USP9X-206ENST00000467173 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
USP9X-206ENST00000467173 PSDA5PKW4 1024 aaPredicted RBP13□□□□□ -0.33
USP9X-206ENST00000467173 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
USP9X-206ENST00000467173 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
USP9X-206ENST00000467173 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
USP9X-206ENST00000467173 TBC1D12O60347 775 aa12.95□□□□□ -0.34
USP9X-206ENST00000467173 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
USP9X-206ENST00000467173 DSG2Q14126 1118 aa12.92□□□□□ -0.34
USP9X-206ENST00000467173 KDM4FA0A1W2PPD8 638 aa12.91□□□□□ -0.34
USP9X-206ENST00000467173 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
USP9X-206ENST00000467173 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
USP9X-206ENST00000467173 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
USP9X-206ENST00000467173 PPP4R3BQ5MIZ7 849 aa12.85□□□□□ -0.35
USP9X-206ENST00000467173 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
USP9X-206ENST00000467173 PDE4AP27815 886 aa12.81□□□□□ -0.36
USP9X-206ENST00000467173 ADGRD1Q6QNK2 874 aa12.8□□□□□ -0.36
USP9X-206ENST00000467173 OXER1Q8TDS5 423 aa12.8□□□□□ -0.36
USP9X-206ENST00000467173 TK2O00142 265 aa12.79□□□□□ -0.36
USP9X-206ENST00000467173 PPP1R15BQ5SWA1 713 aa12.79□□□□□ -0.36
USP9X-206ENST00000467173 KCNH8Q96L42 1107 aa12.79□□□□□ -0.36
USP9X-206ENST00000467173 GTPBP6O43824 516 aaPredicted RBP12.76□□□□□ -0.37
USP9X-206ENST00000467173 DCAF8L2P0C7V8 631 aa12.75□□□□□ -0.37
USP9X-206ENST00000467173 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
USP9X-206ENST00000467173 NCKAP5LQ9HCH0 1330 aa12.73□□□□□ -0.37
USP9X-206ENST00000467173 PSEN2P49810 448 aa12.72□□□□□ -0.37
USP9X-206ENST00000467173 HCSTQ9UBK5 93 aa12.72□□□□□ -0.37
USP9X-206ENST00000467173 DMRTA1Q5VZB9 504 aa12.71□□□□□ -0.37
USP9X-206ENST00000467173 HRO43593 1189 aa12.69□□□□□ -0.38
USP9X-206ENST00000467173 DDX27Q96GQ7 796 aaKnown RBP12.69□□□□□ -0.38
USP9X-206ENST00000467173 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
USP9X-206ENST00000467173 KCNK17Q96T54 332 aa12.69□□□□□ -0.38
USP9X-206ENST00000467173 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
USP9X-206ENST00000467173 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
USP9X-206ENST00000467173 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
USP9X-206ENST00000467173 ANO8Q9HCE9 1232 aaPredicted RBP12.65□□□□□ -0.38
USP9X-206ENST00000467173 FOSBP53539 338 aa12.64□□□□□ -0.39
USP9X-206ENST00000467173 MFSD10Q14728 455 aa12.64□□□□□ -0.39
USP9X-206ENST00000467173 EVI5O60447 810 aa12.62□□□□□ -0.39
USP9X-206ENST00000467173 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
USP9X-206ENST00000467173 PTPREP23469 700 aa12.61□□□□□ -0.39
USP9X-206ENST00000467173 MAP3K9P80192 1104 aa12.61□□□□□ -0.39
USP9X-206ENST00000467173 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
USP9X-206ENST00000467173 VPS9D1Q9Y2B5 631 aa12.61□□□□□ -0.39
USP9X-206ENST00000467173 PLA2G2EQ9NZK7 142 aa12.58□□□□□ -0.4
USP9X-206ENST00000467173 ZDHHC16Q969W1 377 aa12.57□□□□□ -0.4
USP9X-206ENST00000467173 KCTD12Q96CX2 325 aaKnown RBP12.56□□□□□ -0.4
USP9X-206ENST00000467173 EMILIN3Q9NT22 766 aa12.52□□□□□ -0.41
USP9X-206ENST00000467173 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
USP9X-206ENST00000467173 CADPS2Q86UW7 1296 aa12.5□□□□□ -0.41
USP9X-206ENST00000467173 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
USP9X-206ENST00000467173 GOLGA8CPA6NN73 597 aa12.48□□□□□ -0.41
USP9X-206ENST00000467173 BHMG1C9JSJ3 638 aaPredicted RBP12.48□□□□□ -0.41
USP9X-206ENST00000467173 BBXQ8WY36 941 aaPredicted RBP12.48□□□□□ -0.41
USP9X-206ENST00000467173 FBXW7Q969H0 707 aa12.48□□□□□ -0.41
USP9X-206ENST00000467173 MRPL50Q8N5N7 158 aaKnown RBP12.47□□□□□ -0.41
USP9X-206ENST00000467173 NBPF3Q9H094 633 aa12.47□□□□□ -0.41
USP9X-206ENST00000467173 PPP1R3GB7ZBB8 358 aa12.45□□□□□ -0.42
USP9X-206ENST00000467173 CAMK2BQ13554 666 aa12.45□□□□□ -0.42
USP9X-206ENST00000467173 PCDHGA10Q9Y5H3 936 aa12.45□□□□□ -0.42
USP9X-206ENST00000467173 PHF14O94880 888 aa12.44□□□□□ -0.42
USP9X-206ENST00000467173 TYW1BQ6NUM6 668 aa12.44□□□□□ -0.42
USP9X-206ENST00000467173 PTPN5P54829 565 aa12.42□□□□□ -0.42
USP9X-206ENST00000467173 THSD4Q6ZMP0 1018 aa12.41□□□□□ -0.42
USP9X-206ENST00000467173 WNT2BQ93097 391 aa12.41□□□□□ -0.42
USP9X-206ENST00000467173 EPAS1Q99814 870 aa12.4□□□□□ -0.42
USP9X-206ENST00000467173 RABGEF1Q9UJ41 708 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms