RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.89
RRP1-201ENST00000467112 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
RRP1-201ENST00000467112 NCOA1Q15788 1441 aa20.58■□□□□ 0.88
RRP1-201ENST00000467112 NBPF8Q3BBV2 869 aa20.57■□□□□ 0.88
RRP1-201ENST00000467112 MRS2Q9HD23 443 aa20.57■□□□□ 0.88
RRP1-201ENST00000467112 FANCIQ9NVI1 1328 aa20.56■□□□□ 0.88
RRP1-201ENST00000467112 BCL11AQ9H165 835 aa20.56■□□□□ 0.88
RRP1-201ENST00000467112 PPP4R2Q9NY27 417 aa20.55■□□□□ 0.88
RRP1-201ENST00000467112 MIA2Q96PC5 1412 aa20.55■□□□□ 0.88
RRP1-201ENST00000467112 IFT140Q96RY7 1462 aa20.54■□□□□ 0.88
RRP1-201ENST00000467112 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
RRP1-201ENST00000467112 ANKRD30BQ9BXX2 1392 aa20.52■□□□□ 0.88
RRP1-201ENST00000467112 KIF7Q2M1P5 1343 aa20.5■□□□□ 0.87
RRP1-201ENST00000467112 B4GALNT3Q6L9W6 998 aa20.5■□□□□ 0.87
RRP1-201ENST00000467112 ZBED9Q6R2W3 1325 aa20.49■□□□□ 0.87
RRP1-201ENST00000467112 RPRD2Q5VT52 1461 aaKnown RBP20.49■□□□□ 0.87
RRP1-201ENST00000467112 IQGAP2Q13576 1575 aa20.49■□□□□ 0.87
RRP1-201ENST00000467112 ZNF644Q9H582 1327 aaPredicted RBP20.48■□□□□ 0.87
RRP1-201ENST00000467112 SLC4A1APQ9BWU0 796 aaKnown RBP20.48■□□□□ 0.87
RRP1-201ENST00000467112 TEX14Q8IWB6 1497 aa20.47■□□□□ 0.87
RRP1-201ENST00000467112 DAPK1P53355 1430 aa20.47■□□□□ 0.87
RRP1-201ENST00000467112 SPATA31E1Q6ZUB1 1445 aa20.45■□□□□ 0.86
RRP1-201ENST00000467112 ERICH6Q7L0X2 663 aa20.45■□□□□ 0.86
RRP1-201ENST00000467112 PBRM1Q86U86 1689 aa20.45■□□□□ 0.86
RRP1-201ENST00000467112 CNGB1Q14028 1251 aaPredicted RBP20.45■□□□□ 0.86
RRP1-201ENST00000467112 ABCC5O15440 1437 aa20.44■□□□□ 0.86
RRP1-201ENST00000467112 ROCK1Q13464 1354 aa20.43■□□□□ 0.86
RRP1-201ENST00000467112 POLR3GLQ9BT43 218 aa20.38■□□□□ 0.85
RRP1-201ENST00000467112 ADAMTS12P58397 1594 aa20.37■□□□□ 0.85
RRP1-201ENST00000467112 DNMT1P26358 1616 aaKnown RBP20.37■□□□□ 0.85
RRP1-201ENST00000467112 ZNF326Q5BKZ1 582 aaKnown RBP20.35■□□□□ 0.85
RRP1-201ENST00000467112 SENP3-EIF4A1A0A087X0R7 540 aa20.33■□□□□ 0.84
RRP1-201ENST00000467112 DHX29Q7Z478 1369 aaKnown RBP20.33■□□□□ 0.84
RRP1-201ENST00000467112 EIF4G3O43432 1585 aaKnown RBP20.33■□□□□ 0.84
RRP1-201ENST00000467112 PZPP20742 1482 aa20.32■□□□□ 0.84
RRP1-201ENST00000467112 POLR1AO95602 1720 aaPredicted RBP20.32■□□□□ 0.84
RRP1-201ENST00000467112 NUP153P49790 1475 aaKnown RBP20.32■□□□□ 0.84
RRP1-201ENST00000467112 USP47Q96K76 1375 aa20.3■□□□□ 0.84
RRP1-201ENST00000467112 SMG6Q86US8 1419 aaKnown RBP20.29■□□□□ 0.84
RRP1-201ENST00000467112 DISP1Q96F81 1524 aa20.28■□□□□ 0.84
RRP1-201ENST00000467112 CFDP1Q9UEE9 299 aaPredicted RBP20.27■□□□□ 0.84
RRP1-201ENST00000467112 NUDCQ9Y266 331 aa20.27■□□□□ 0.84
RRP1-201ENST00000467112 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.83
RRP1-201ENST00000467112 BCORL1Q5H9F3 1711 aa20.26■□□□□ 0.83
RRP1-201ENST00000467112 PRG4Q92954 1404 aaPredicted RBP20.26■□□□□ 0.83
RRP1-201ENST00000467112 PKD2Q13563 968 aa20.26■□□□□ 0.83
RRP1-201ENST00000467112 KIAA0556O60303 1618 aa20.26■□□□□ 0.83
RRP1-201ENST00000467112 MBD5Q9P267 1494 aa20.25■□□□□ 0.83
RRP1-201ENST00000467112 KIAA1107Q9UPP5 1409 aa20.24■□□□□ 0.83
RRP1-201ENST00000467112 CAMSAP2Q08AD1 1489 aa20.24■□□□□ 0.83
RRP1-201ENST00000467112 ZNF608Q9ULD9 1512 aaPredicted RBP20.23■□□□□ 0.83
RRP1-201ENST00000467112 MAGI1Q96QZ7 1491 aaPredicted RBP20.23■□□□□ 0.83
RRP1-201ENST00000467112 KIAA0586Q9BVV6 1533 aa20.23■□□□□ 0.83
RRP1-201ENST00000467112 RAPGEF6Q8TEU7 1601 aa20.22■□□□□ 0.83
RRP1-201ENST00000467112 CCDC136Q96JN2 1154 aa20.21■□□□□ 0.83
RRP1-201ENST00000467112 RNF123Q5XPI4 1314 aa20.2■□□□□ 0.82
RRP1-201ENST00000467112 TROQ12816 1431 aaPredicted RBP20.19■□□□□ 0.82
RRP1-201ENST00000467112 PNISRQ8TF01 805 aaKnown RBP20.19■□□□□ 0.82
RRP1-201ENST00000467112 TMC1Q8TDI8 760 aa20.19■□□□□ 0.82
RRP1-201ENST00000467112 GPATCH8Q9UKJ3 1502 aaKnown RBP20.18■□□□□ 0.82
RRP1-201ENST00000467112 NOP58Q9Y2X3 529 aaKnown RBP20.17■□□□□ 0.82
RRP1-201ENST00000467112 KDM5CP41229 1560 aa20.17■□□□□ 0.82
RRP1-201ENST00000467112 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
RRP1-201ENST00000467112 KIF14Q15058 1648 aa20.16■□□□□ 0.82
RRP1-201ENST00000467112 ARID4BQ4LE39 1312 aaPredicted RBP20.15■□□□□ 0.82
RRP1-201ENST00000467112 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
RRP1-201ENST00000467112 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.82
RRP1-201ENST00000467112 PLB1Q6P1J6 1458 aa20.14■□□□□ 0.81
RRP1-201ENST00000467112 ADGBQ8N7X0 1667 aa20.14■□□□□ 0.81
RRP1-201ENST00000467112 ANKRD50Q9ULJ7 1429 aa20.13■□□□□ 0.81
RRP1-201ENST00000467112 ADGRL2O95490 1459 aa20.13■□□□□ 0.81
RRP1-201ENST00000467112 KDM2AQ9Y2K7 1162 aa20.13■□□□□ 0.81
RRP1-201ENST00000467112 NBR1Q14596 966 aa20.11■□□□□ 0.81
RRP1-201ENST00000467112 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
RRP1-201ENST00000467112 ST20-MTHFSA0A0A6YYL1 179 aa20.11■□□□□ 0.81
RRP1-201ENST00000467112 NUP155O75694 1391 aa20.11■□□□□ 0.81
RRP1-201ENST00000467112 ROCK2O75116 1388 aaKnown RBP20.1■□□□□ 0.81
RRP1-201ENST00000467112 ITSN2Q9NZM3 1697 aa20.1■□□□□ 0.81
RRP1-201ENST00000467112 DEKP35659 375 aaKnown RBP20.1■□□□□ 0.81
RRP1-201ENST00000467112 RALGAPBQ86X10 1494 aa20.1■□□□□ 0.81
RRP1-201ENST00000467112 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
RRP1-201ENST00000467112 UHRF1BP1Q6BDS2 1440 aa20.09■□□□□ 0.81
RRP1-201ENST00000467112 SYNJ2O15056 1496 aa20.09■□□□□ 0.81
RRP1-201ENST00000467112 KIF15Q9NS87 1388 aa20.09■□□□□ 0.81
RRP1-201ENST00000467112 CROCC2H7BZ55 1655 aa20.07■□□□□ 0.8
RRP1-201ENST00000467112 ANP32AP39687 249 aaKnown RBP20.05■□□□□ 0.8
RRP1-201ENST00000467112 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
RRP1-201ENST00000467112 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
RRP1-201ENST00000467112 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
RRP1-201ENST00000467112 SALL2Q9Y467 1007 aaPredicted RBP20.04■□□□□ 0.8
RRP1-201ENST00000467112 IPO9Q96P70 1041 aaKnown RBP20.04■□□□□ 0.8
RRP1-201ENST00000467112 BRD4O60885 1362 aaPredicted RBP20.03■□□□□ 0.8
RRP1-201ENST00000467112 CHMP7Q8WUX9 453 aaPredicted RBP20.02■□□□□ 0.8
RRP1-201ENST00000467112 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
RRP1-201ENST00000467112 C9orf84Q5VXU9 1444 aa20.02■□□□□ 0.8
RRP1-201ENST00000467112 FBLN2P98095 1184 aa20.02■□□□□ 0.79
RRP1-201ENST00000467112 RALBP1Q15311 655 aa20.01■□□□□ 0.79
RRP1-201ENST00000467112 RRP1P56182 461 aaKnown RBP20■□□□□ 0.79
RRP1-201ENST00000467112 ARHGEF12Q9NZN5 1544 aa20■□□□□ 0.79
RRP1-201ENST00000467112 EXOC6Q8TAG9 804 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms