RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 DNMT1P26358 1616 aaKnown RBP24.61■■□□□ 1.53
NUP58-208ENST00000466694 DAPK1P53355 1430 aa24.58■■□□□ 1.53
NUP58-208ENST00000466694 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.52
NUP58-208ENST00000466694 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
NUP58-208ENST00000466694 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
NUP58-208ENST00000466694 CHIC2Q9UKJ5 165 aa24.55■■□□□ 1.52
NUP58-208ENST00000466694 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
NUP58-208ENST00000466694 ABCC5O15440 1437 aa24.54■■□□□ 1.52
NUP58-208ENST00000466694 PREX2Q70Z35 1606 aa24.53■■□□□ 1.52
NUP58-208ENST00000466694 NEUROD1Q13562 356 aa24.53■■□□□ 1.52
NUP58-208ENST00000466694 CDC42BPBQ9Y5S2 1711 aa24.53■■□□□ 1.52
NUP58-208ENST00000466694 TTC37Q6PGP7 1564 aa24.52■■□□□ 1.52
NUP58-208ENST00000466694 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.52■■□□□ 1.52
NUP58-208ENST00000466694 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
NUP58-208ENST00000466694 ZNF644Q9H582 1327 aaPredicted RBP24.51■■□□□ 1.51
NUP58-208ENST00000466694 KDM6BO15054 1643 aa24.5■■□□□ 1.51
NUP58-208ENST00000466694 ACIN1Q9UKV3 1341 aaKnown RBP24.49■■□□□ 1.51
NUP58-208ENST00000466694 CROCC2H7BZ55 1655 aa24.47■■□□□ 1.51
NUP58-208ENST00000466694 MYO5CQ9NQX4 1742 aa24.47■■□□□ 1.51
NUP58-208ENST00000466694 ADGBQ8N7X0 1667 aa24.44■■□□□ 1.5
NUP58-208ENST00000466694 SAMD9LQ8IVG5 1584 aa24.41■■□□□ 1.5
NUP58-208ENST00000466694 WDR7Q9Y4E6 1490 aa24.41■■□□□ 1.5
NUP58-208ENST00000466694 PPP1R15AO75807 674 aaPredicted RBP24.41■■□□□ 1.5
NUP58-208ENST00000466694 MIER1Q8N108 512 aa24.41■■□□□ 1.5
NUP58-208ENST00000466694 DENND4BO75064 1496 aaPredicted RBP24.4■■□□□ 1.5
NUP58-208ENST00000466694 TONSLQ96HA7 1378 aa24.4■■□□□ 1.5
NUP58-208ENST00000466694 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
NUP58-208ENST00000466694 ADGRL2O95490 1459 aa24.38■■□□□ 1.49
NUP58-208ENST00000466694 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
NUP58-208ENST00000466694 ARHGEF5Q12774 1597 aa24.38■■□□□ 1.49
NUP58-208ENST00000466694 ARHGAP5Q13017 1502 aa24.35■■□□□ 1.49
NUP58-208ENST00000466694 RIMBP3CA6NJZ7 1639 aa24.35■■□□□ 1.49
NUP58-208ENST00000466694 RIMBP3BA6NNM3 1639 aa24.35■■□□□ 1.49
NUP58-208ENST00000466694 RIMBP3Q9UFD9 1639 aa24.35■■□□□ 1.49
NUP58-208ENST00000466694 KCNH8Q96L42 1107 aa24.34■■□□□ 1.49
NUP58-208ENST00000466694 MBD5Q9P267 1494 aa24.34■■□□□ 1.49
NUP58-208ENST00000466694 SHANK2Q9UPX8 1470 aa24.34■■□□□ 1.49
NUP58-208ENST00000466694 NCOA1Q15788 1441 aa24.34■■□□□ 1.49
NUP58-208ENST00000466694 ASXL2Q76L83 1435 aa24.33■■□□□ 1.49
NUP58-208ENST00000466694 MPHOSPH9Q99550 1183 aa24.33■■□□□ 1.49
NUP58-208ENST00000466694 PLCH2O75038 1416 aa24.32■■□□□ 1.48
NUP58-208ENST00000466694 ABCA9Q8IUA7 1624 aa24.32■■□□□ 1.48
NUP58-208ENST00000466694 ARAP3Q8WWN8 1544 aa24.32■■□□□ 1.48
NUP58-208ENST00000466694 CENPBP07199 599 aaPredicted RBP24.28■■□□□ 1.48
NUP58-208ENST00000466694 SYCP2Q9BX26 1530 aa24.28■■□□□ 1.48
NUP58-208ENST00000466694 ANKRD30AQ9BXX3 1397 aa24.28■■□□□ 1.48
NUP58-208ENST00000466694 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
NUP58-208ENST00000466694 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
NUP58-208ENST00000466694 KIAA1107Q9UPP5 1409 aa24.26■■□□□ 1.47
NUP58-208ENST00000466694 C9orf84Q5VXU9 1444 aa24.25■■□□□ 1.47
NUP58-208ENST00000466694 NPM1P06748 294 aaKnown RBP eCLIP24.23■■□□□ 1.47
NUP58-208ENST00000466694 ABCC1P33527 1531 aa24.22■■□□□ 1.47
NUP58-208ENST00000466694 HNRNPMP52272 730 aaKnown RBP eCLIP24.22■■□□□ 1.47
NUP58-208ENST00000466694 MAST1Q9Y2H9 1570 aa24.22■■□□□ 1.47
NUP58-208ENST00000466694 RSPH4AQ5TD94 716 aa24.21■■□□□ 1.47
NUP58-208ENST00000466694 ARHGEF12Q9NZN5 1544 aa24.21■■□□□ 1.47
NUP58-208ENST00000466694 ANKRD30BQ9BXX2 1392 aa24.2■■□□□ 1.46
NUP58-208ENST00000466694 PZPP20742 1482 aa24.2■■□□□ 1.46
NUP58-208ENST00000466694 EFCAB2Q5VUJ9 269 aa24.18■■□□□ 1.46
NUP58-208ENST00000466694 ANKRD50Q9ULJ7 1429 aa24.17■■□□□ 1.46
NUP58-208ENST00000466694 SLC4A1APQ9BWU0 796 aaKnown RBP24.17■■□□□ 1.46
NUP58-208ENST00000466694 TSPY4P0CV99 314 aa24.15■■□□□ 1.46
NUP58-208ENST00000466694 TSPY10P0CW01 314 aa24.15■■□□□ 1.46
NUP58-208ENST00000466694 RPRD2Q5VT52 1461 aaKnown RBP24.15■■□□□ 1.46
NUP58-208ENST00000466694 FOXD1Q16676 465 aa24.13■■□□□ 1.45
NUP58-208ENST00000466694 CYB5RLQ6IPT4 315 aa24.13■■□□□ 1.45
NUP58-208ENST00000466694 FANCAO15360 1455 aa24.12■■□□□ 1.45
NUP58-208ENST00000466694 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
NUP58-208ENST00000466694 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
NUP58-208ENST00000466694 KDM5DQ9BY66 1539 aa24.09■■□□□ 1.45
NUP58-208ENST00000466694 KIF15Q9NS87 1388 aa24.09■■□□□ 1.45
NUP58-208ENST00000466694 YTHDC1Q96MU7 727 aaKnown RBP24.08■■□□□ 1.45
NUP58-208ENST00000466694 TRAPPC8Q9Y2L5 1435 aa24.08■■□□□ 1.44
NUP58-208ENST00000466694 TEX14Q8IWB6 1497 aa24.06■■□□□ 1.44
NUP58-208ENST00000466694 L3MBTL2Q969R5 705 aa24.06■■□□□ 1.44
NUP58-208ENST00000466694 CFAP74Q9C0B2 1584 aa24.04■■□□□ 1.44
NUP58-208ENST00000466694 CD109Q6YHK3 1445 aa24.03■■□□□ 1.44
NUP58-208ENST00000466694 DDX10Q13206 875 aaKnown RBP24.02■■□□□ 1.44
NUP58-208ENST00000466694 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
NUP58-208ENST00000466694 ADGRL1O94910 1474 aa24.02■■□□□ 1.44
NUP58-208ENST00000466694 MAP3K4Q9Y6R4 1608 aa24.01■■□□□ 1.43
NUP58-208ENST00000466694 ZFYVE16Q7Z3T8 1539 aa24.01■■□□□ 1.43
NUP58-208ENST00000466694 GLI2P10070 1586 aa24■■□□□ 1.43
NUP58-208ENST00000466694 NUP155O75694 1391 aa24■■□□□ 1.43
NUP58-208ENST00000466694 RTEL1-TNFRSF6BF6WH68 1400 aa24■■□□□ 1.43
NUP58-208ENST00000466694 PKD2Q13563 968 aa23.99■■□□□ 1.43
NUP58-208ENST00000466694 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
NUP58-208ENST00000466694 DUOX2Q9NRD8 1548 aa23.98■■□□□ 1.43
NUP58-208ENST00000466694 SCAPERQ9BY12 1400 aa23.97■■□□□ 1.43
NUP58-208ENST00000466694 UNC13BO14795 1591 aa23.96■■□□□ 1.43
NUP58-208ENST00000466694 DIP2BQ9P265 1576 aa23.94■■□□□ 1.42
NUP58-208ENST00000466694 AFAP1Q8N556 730 aa23.94■■□□□ 1.42
NUP58-208ENST00000466694 ATP7AQ04656 1500 aa23.93■■□□□ 1.42
NUP58-208ENST00000466694 ERBINQ96RT1 1412 aa23.93■■□□□ 1.42
NUP58-208ENST00000466694 NEO1Q92859 1461 aa23.92■■□□□ 1.42
NUP58-208ENST00000466694 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
NUP58-208ENST00000466694 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
NUP58-208ENST00000466694 EIF4G2P78344 907 aaKnown RBP eCLIP23.91■■□□□ 1.42
NUP58-208ENST00000466694 KDM5CP41229 1560 aa23.9■■□□□ 1.42
NUP58-208ENST00000466694 FAM135AQ9P2D6 1515 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms