RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PDCD7Q8N8D1 485 aaKnown RBP9.52□□□□□ -0.89
CDC42BPA-211ENST00000466538 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
CDC42BPA-211ENST00000466538 PPP1R15BQ5SWA1 713 aa9.5□□□□□ -0.89
CDC42BPA-211ENST00000466538 TMEM121BQ9BXQ6 578 aaPredicted RBP9.5□□□□□ -0.89
CDC42BPA-211ENST00000466538 G3V3G9 751 aa9.49□□□□□ -0.89
CDC42BPA-211ENST00000466538 SEMA3EO15041 775 aa9.49□□□□□ -0.89
CDC42BPA-211ENST00000466538 GABBR2O75899 941 aa9.48□□□□□ -0.89
CDC42BPA-211ENST00000466538 TMC2Q8TDI7 906 aa9.48□□□□□ -0.89
CDC42BPA-211ENST00000466538 L3MBTL3Q96JM7 780 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-211ENST00000466538 BOLA1Q9Y3E2 137 aa9.48□□□□□ -0.89
CDC42BPA-211ENST00000466538 PLCG2P16885 1265 aa9.47□□□□□ -0.89
CDC42BPA-211ENST00000466538 FOXK1P85037 733 aa9.46□□□□□ -0.9
CDC42BPA-211ENST00000466538 DCBLD2Q96PD2 775 aa9.45□□□□□ -0.9
CDC42BPA-211ENST00000466538 DSG2Q14126 1118 aa9.44□□□□□ -0.9
CDC42BPA-211ENST00000466538 SPDYE16A6NNV3 312 aaPredicted RBP9.43□□□□□ -0.9
CDC42BPA-211ENST00000466538 KIF3CO14782 793 aa9.41□□□□□ -0.9
CDC42BPA-211ENST00000466538 SEC24BO95487 1268 aa9.41□□□□□ -0.9
CDC42BPA-211ENST00000466538 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
CDC42BPA-211ENST00000466538 SLC39A7Q92504 469 aa9.41□□□□□ -0.9
CDC42BPA-211ENST00000466538 C7P10643 843 aa9.4□□□□□ -0.9
CDC42BPA-211ENST00000466538 POTEHQ6S545 545 aa9.4□□□□□ -0.9
CDC42BPA-211ENST00000466538 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
CDC42BPA-211ENST00000466538 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
CDC42BPA-211ENST00000466538 EMILIN3Q9NT22 766 aa9.39□□□□□ -0.91
CDC42BPA-211ENST00000466538 PDIA6Q15084 440 aa9.37□□□□□ -0.91
CDC42BPA-211ENST00000466538 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
CDC42BPA-211ENST00000466538 DPYSL4O14531 572 aa9.36□□□□□ -0.91
CDC42BPA-211ENST00000466538 COLQQ9Y215 455 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPA-211ENST00000466538 ZMYND10O75800 440 aa9.33□□□□□ -0.92
CDC42BPA-211ENST00000466538 MAP3K9P80192 1104 aa9.33□□□□□ -0.92
CDC42BPA-211ENST00000466538 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
CDC42BPA-211ENST00000466538 TMEM92Q6UXU6 159 aa9.3□□□□□ -0.92
CDC42BPA-211ENST00000466538 METRNQ9UJH8 293 aa9.3□□□□□ -0.92
CDC42BPA-211ENST00000466538 POTEFA5A3E0 1075 aa9.29□□□□□ -0.92
CDC42BPA-211ENST00000466538 TBC1D12O60347 775 aa9.29□□□□□ -0.92
CDC42BPA-211ENST00000466538 TMEM132AQ24JP5 1023 aa9.29□□□□□ -0.92
CDC42BPA-211ENST00000466538 BARGINQ6ZT62 677 aa9.29□□□□□ -0.92
CDC42BPA-211ENST00000466538 OXER1Q8TDS5 423 aa9.29□□□□□ -0.92
CDC42BPA-211ENST00000466538 RBM26Q5T8P6 1007 aaKnown RBP9.28□□□□□ -0.92
CDC42BPA-211ENST00000466538 GPIHBP1Q8IV16 184 aa9.27□□□□□ -0.93
CDC42BPA-211ENST00000466538 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
CDC42BPA-211ENST00000466538 POTEIP0CG38 1075 aa9.26□□□□□ -0.93
CDC42BPA-211ENST00000466538 PTGER2P43116 358 aa9.26□□□□□ -0.93
CDC42BPA-211ENST00000466538 C3orf67Q6ZVT6 689 aa9.26□□□□□ -0.93
CDC42BPA-211ENST00000466538 SP7Q8TDD2 431 aaPredicted RBP9.25□□□□□ -0.93
CDC42BPA-211ENST00000466538 SLC34A2O95436 690 aa9.23□□□□□ -0.93
CDC42BPA-211ENST00000466538 PTCD2Q8WV60 388 aaKnown RBP9.23□□□□□ -0.93
CDC42BPA-211ENST00000466538 BRPF1P55201 1214 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPA-211ENST00000466538 UPF1Q92900 1129 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDC42BPA-211ENST00000466538 AK7Q96M32 723 aa9.22□□□□□ -0.93
CDC42BPA-211ENST00000466538 GRXCR2A6NFK2 248 aa9.21□□□□□ -0.94
CDC42BPA-211ENST00000466538 KRI1Q8N9T8 703 aaKnown RBP9.21□□□□□ -0.94
CDC42BPA-211ENST00000466538 ZNF316A6NFI3 1004 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPA-211ENST00000466538 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.2□□□□□ -0.94
CDC42BPA-211ENST00000466538 EVI5O60447 810 aa9.19□□□□□ -0.94
CDC42BPA-211ENST00000466538 OSBPP22059 807 aa9.19□□□□□ -0.94
CDC42BPA-211ENST00000466538 ANO8Q9HCE9 1232 aaPredicted RBP9.19□□□□□ -0.94
CDC42BPA-211ENST00000466538 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
CDC42BPA-211ENST00000466538 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
CDC42BPA-211ENST00000466538 GTF3C3Q9Y5Q9 886 aa9.16□□□□□ -0.94
CDC42BPA-211ENST00000466538 NUTM2FA1L443 756 aa9.15□□□□□ -0.94
CDC42BPA-211ENST00000466538 MINK1Q8N4C8 1332 aaPredicted RBP9.14□□□□□ -0.95
CDC42BPA-211ENST00000466538 GPR37O15354 613 aa9.14□□□□□ -0.95
CDC42BPA-211ENST00000466538 DDX12PQ92771 950 aa9.14□□□□□ -0.95
CDC42BPA-211ENST00000466538 FCHSD2O94868 740 aa9.13□□□□□ -0.95
CDC42BPA-211ENST00000466538 ERICH6Q7L0X2 663 aa9.13□□□□□ -0.95
CDC42BPA-211ENST00000466538 HIC1Q14526 733 aa9.12□□□□□ -0.95
CDC42BPA-211ENST00000466538 EPAS1Q99814 870 aa9.12□□□□□ -0.95
CDC42BPA-211ENST00000466538 TRIM66O15016 1216 aa9.11□□□□□ -0.95
CDC42BPA-211ENST00000466538 GNPATO15228 680 aa9.11□□□□□ -0.95
CDC42BPA-211ENST00000466538 PHF14O94880 888 aa9.11□□□□□ -0.95
CDC42BPA-211ENST00000466538 MAP2K5Q13163 448 aa9.1□□□□□ -0.95
CDC42BPA-211ENST00000466538 PCDHGA4Q9Y5G9 962 aa9.09□□□□□ -0.95
CDC42BPA-211ENST00000466538 IRF6O14896 467 aa9.08□□□□□ -0.96
CDC42BPA-211ENST00000466538 PDE4DQ08499 809 aa9.07□□□□□ -0.96
CDC42BPA-211ENST00000466538 PTGDRQ13258 359 aa9.06□□□□□ -0.96
CDC42BPA-211ENST00000466538 EN1Q05925 392 aaPredicted RBP9.05□□□□□ -0.96
CDC42BPA-211ENST00000466538 KDM4FA0A1W2PPD8 638 aa9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 PRIM1P49642 420 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 DOK7Q18PE1 504 aa9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 TYW1BQ6NUM6 668 aa9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 MAMSTRQ6ZN01 415 aa9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 SLAIN1Q8ND83 568 aa9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 FBXW7Q969H0 707 aa9.04□□□□□ -0.96
CDC42BPA-211ENST00000466538 ZSWIM6Q9HCJ5 1215 aa9.03□□□□□ -0.96
CDC42BPA-211ENST00000466538 PCDHGA10Q9Y5H3 936 aa9.03□□□□□ -0.96
CDC42BPA-211ENST00000466538 RIMBP2O15034 1052 aa9.02□□□□□ -0.97
CDC42BPA-211ENST00000466538 AMHR2Q16671 573 aa9.02□□□□□ -0.97
CDC42BPA-211ENST00000466538 CCDC102AQ96A19 550 aa9.02□□□□□ -0.97
CDC42BPA-211ENST00000466538 JPH4Q96JJ6 628 aa9.02□□□□□ -0.97
CDC42BPA-211ENST00000466538 KDM4CQ9H3R0 1056 aa9.02□□□□□ -0.97
CDC42BPA-211ENST00000466538 MAP3K7O43318 606 aa9.01□□□□□ -0.97
CDC42BPA-211ENST00000466538 GPBP1L1Q9HC44 474 aaPredicted RBP9.01□□□□□ -0.97
CDC42BPA-211ENST00000466538 POTEJP0CG39 1038 aa9□□□□□ -0.97
CDC42BPA-211ENST00000466538 SCUBE2Q9NQ36 999 aa9□□□□□ -0.97
CDC42BPA-211ENST00000466538 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
CDC42BPA-211ENST00000466538 FECHP22830 423 aa8.99□□□□□ -0.97
CDC42BPA-211ENST00000466538 FOSBP53539 338 aa8.99□□□□□ -0.97
CDC42BPA-211ENST00000466538 CERKQ8TCT0 537 aa8.99□□□□□ -0.97
CDC42BPA-211ENST00000466538 POTEB2H3BUK9 544 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms