RNA–Protein interactions for RNA: ENST00000464148.2

MRPL55-224, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-224ENST00000464148 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
MRPL55-224ENST00000464148 ATP1B4Q9UN42 357 aaPredicted RBP22.21■■□□□ 1.15
MRPL55-224ENST00000464148 PLCH2O75038 1416 aa22.21■■□□□ 1.15
MRPL55-224ENST00000464148 CERKQ8TCT0 537 aa22.19■■□□□ 1.14
MRPL55-224ENST00000464148 ATP10AO60312 1499 aa22.16■■□□□ 1.14
MRPL55-224ENST00000464148 EFCAB2Q5VUJ9 269 aa22.16■■□□□ 1.14
MRPL55-224ENST00000464148 MYO5CQ9NQX4 1742 aa22.15■■□□□ 1.14
MRPL55-224ENST00000464148 C9orf84Q5VXU9 1444 aa22.14■■□□□ 1.14
MRPL55-224ENST00000464148 ARHGEF12Q9NZN5 1544 aa22.14■■□□□ 1.13
MRPL55-224ENST00000464148 EHMT2Q96KQ7 1210 aa22.13■■□□□ 1.13
MRPL55-224ENST00000464148 CDK11AQ9UQ88 783 aaPredicted RBP22.13■■□□□ 1.13
MRPL55-224ENST00000464148 PREX1Q8TCU6 1659 aa22.12■■□□□ 1.13
MRPL55-224ENST00000464148 UBTFP17480 764 aaKnown RBP22.11■■□□□ 1.13
MRPL55-224ENST00000464148 FMN1Q68DA7 1419 aa22.11■■□□□ 1.13
MRPL55-224ENST00000464148 CEBPAP49715 358 aaPredicted RBP22.1■■□□□ 1.13
MRPL55-224ENST00000464148 MYT1LQ9UL68 1186 aa22.1■■□□□ 1.13
MRPL55-224ENST00000464148 ZNF518AQ6AHZ1 1483 aa22.09■■□□□ 1.13
MRPL55-224ENST00000464148 ARHGAP5Q13017 1502 aa22.07■■□□□ 1.12
MRPL55-224ENST00000464148 KIF14Q15058 1648 aa22.07■■□□□ 1.12
MRPL55-224ENST00000464148 AFAP1Q8N556 730 aa22.05■■□□□ 1.12
MRPL55-224ENST00000464148 DMRT2Q9Y5R5 561 aa22.05■■□□□ 1.12
MRPL55-224ENST00000464148 CLIP1P30622 1438 aa22.03■■□□□ 1.12
MRPL55-224ENST00000464148 UHRF1BP1Q6BDS2 1440 aa22.03■■□□□ 1.12
MRPL55-224ENST00000464148 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
MRPL55-224ENST00000464148 TROQ12816 1431 aaPredicted RBP22.02■■□□□ 1.12
MRPL55-224ENST00000464148 KDM5CP41229 1560 aa22.01■■□□□ 1.11
MRPL55-224ENST00000464148 STRCQ7RTU9 1775 aa21.99■■□□□ 1.11
MRPL55-224ENST00000464148 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
MRPL55-224ENST00000464148 DIP2CQ9Y2E4 1556 aa21.98■■□□□ 1.11
MRPL55-224ENST00000464148 REREQ9P2R6 1566 aa21.95■■□□□ 1.1
MRPL55-224ENST00000464148 ABCA6Q8N139 1617 aa21.95■■□□□ 1.1
MRPL55-224ENST00000464148 LRRIQ1Q96JM4 1722 aa21.94■■□□□ 1.1
MRPL55-224ENST00000464148 CDC42BPBQ9Y5S2 1711 aa21.94■■□□□ 1.1
MRPL55-224ENST00000464148 SETD1BQ9UPS6 1966 aaKnown RBP21.94■■□□□ 1.1
MRPL55-224ENST00000464148 DISP3Q9P2K9 1392 aa21.94■■□□□ 1.1
MRPL55-224ENST00000464148 C3P01024 1663 aa21.93■■□□□ 1.1
MRPL55-224ENST00000464148 MLH3Q9UHC1 1453 aa21.93■■□□□ 1.1
MRPL55-224ENST00000464148 PREX2Q70Z35 1606 aa21.9■■□□□ 1.1
MRPL55-224ENST00000464148 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.1
MRPL55-224ENST00000464148 PTPRTO14522 1441 aa21.89■■□□□ 1.09
MRPL55-224ENST00000464148 ABCC1P33527 1531 aa21.88■■□□□ 1.09
MRPL55-224ENST00000464148 AGLP35573 1532 aa21.88■■□□□ 1.09
MRPL55-224ENST00000464148 ITSN2Q9NZM3 1697 aa21.88■■□□□ 1.09
MRPL55-224ENST00000464148 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
MRPL55-224ENST00000464148 ILDR2Q71H61 639 aa21.84■■□□□ 1.09
MRPL55-224ENST00000464148 CNTLNQ9NXG0 1405 aa21.83■■□□□ 1.09
MRPL55-224ENST00000464148 KIDINS220Q9ULH0 1771 aa21.83■■□□□ 1.09
MRPL55-224ENST00000464148 CASKIN1Q8WXD9 1431 aa21.81■■□□□ 1.08
MRPL55-224ENST00000464148 CDC42BPAQ5VT25 1732 aa21.8■■□□□ 1.08
MRPL55-224ENST00000464148 ZNF777Q9ULD5 760 aaPredicted RBP21.8■■□□□ 1.08
MRPL55-224ENST00000464148 SOCS7O14512 581 aa21.79■■□□□ 1.08
MRPL55-224ENST00000464148 NCOA1Q15788 1441 aa21.79■■□□□ 1.08
MRPL55-224ENST00000464148 LTBP4Q8N2S1 1624 aa21.78■■□□□ 1.08
MRPL55-224ENST00000464148 SPATA31D1Q6ZQQ2 1576 aa21.77■■□□□ 1.08
MRPL55-224ENST00000464148 SAMD9LQ8IVG5 1584 aa21.76■■□□□ 1.07
MRPL55-224ENST00000464148 CHIC1Q5VXU3 224 aa21.75■■□□□ 1.07
MRPL55-224ENST00000464148 CAMSAP1Q5T5Y3 1602 aa21.75■■□□□ 1.07
MRPL55-224ENST00000464148 MROH2AA6NES4 1674 aa21.75■■□□□ 1.07
MRPL55-224ENST00000464148 SPAG9O60271 1321 aaKnown RBP21.75■■□□□ 1.07
MRPL55-224ENST00000464148 NPATQ14207 1427 aa21.74■■□□□ 1.07
MRPL55-224ENST00000464148 IQSEC2Q5JU85 1478 aa21.74■■□□□ 1.07
MRPL55-224ENST00000464148 SUPT6HQ7KZ85 1726 aaKnown RBP21.73■■□□□ 1.07
MRPL55-224ENST00000464148 SYCP2Q9BX26 1530 aa21.73■■□□□ 1.07
MRPL55-224ENST00000464148 ZMYM3Q14202 1370 aa21.73■■□□□ 1.07
MRPL55-224ENST00000464148 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.07
MRPL55-224ENST00000464148 FYCO1Q9BQS8 1478 aa21.71■■□□□ 1.07
MRPL55-224ENST00000464148 NCKAP5LQ9HCH0 1330 aa21.69■■□□□ 1.06
MRPL55-224ENST00000464148 GPATCH8Q9UKJ3 1502 aaKnown RBP21.69■■□□□ 1.06
MRPL55-224ENST00000464148 CLTCQ00610 1675 aaKnown RBP21.69■■□□□ 1.06
MRPL55-224ENST00000464148 ATP7AQ04656 1500 aa21.68■■□□□ 1.06
MRPL55-224ENST00000464148 ZNF335Q9H4Z2 1342 aaPredicted RBP21.65■■□□□ 1.06
MRPL55-224ENST00000464148 CFDP1Q9UEE9 299 aaPredicted RBP21.65■■□□□ 1.06
MRPL55-224ENST00000464148 A2MP01023 1474 aa21.64■■□□□ 1.06
MRPL55-224ENST00000464148 PLEKHH2Q8IVE3 1493 aa21.64■■□□□ 1.06
MRPL55-224ENST00000464148 GGT6Q6P531 493 aa21.64■■□□□ 1.05
MRPL55-224ENST00000464148 MYO3AQ8NEV4 1616 aa21.64■■□□□ 1.05
MRPL55-224ENST00000464148 KIAA1107Q9UPP5 1409 aa21.63■■□□□ 1.05
MRPL55-224ENST00000464148 INO80Q9ULG1 1556 aaPredicted RBP21.63■■□□□ 1.05
MRPL55-224ENST00000464148 UBAP1LF5GYI3 381 aa21.63■■□□□ 1.05
MRPL55-224ENST00000464148 ZNF142P52746 1687 aaPredicted RBP21.63■■□□□ 1.05
MRPL55-224ENST00000464148 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
MRPL55-224ENST00000464148 PLXNC1O60486 1568 aa21.62■■□□□ 1.05
MRPL55-224ENST00000464148 PKD2Q13563 968 aa21.62■■□□□ 1.05
MRPL55-224ENST00000464148 CEP170BQ9Y4F5 1589 aaPredicted RBP21.61■■□□□ 1.05
MRPL55-224ENST00000464148 PLA2R1Q13018 1463 aa21.6■■□□□ 1.05
MRPL55-224ENST00000464148 PTPRKQ15262 1439 aa21.6■■□□□ 1.05
MRPL55-224ENST00000464148 MTUS2Q5JR59 1369 aa21.57■■□□□ 1.04
MRPL55-224ENST00000464148 TCOF1Q13428 1488 aaKnown RBP21.57■■□□□ 1.04
MRPL55-224ENST00000464148 ADGBQ8N7X0 1667 aa21.56■■□□□ 1.04
MRPL55-224ENST00000464148 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
MRPL55-224ENST00000464148 ZNF644Q9H582 1327 aaPredicted RBP21.51■■□□□ 1.03
MRPL55-224ENST00000464148 A2ML1A8K2U0 1454 aa21.5■■□□□ 1.03
MRPL55-224ENST00000464148 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
MRPL55-224ENST00000464148 DNMT1P26358 1616 aaKnown RBP21.48■■□□□ 1.03
MRPL55-224ENST00000464148 TIAM1Q13009 1591 aa21.48■■□□□ 1.03
MRPL55-224ENST00000464148 DHX29Q7Z478 1369 aaKnown RBP21.46■■□□□ 1.03
MRPL55-224ENST00000464148 RTEL1-TNFRSF6BF6WH68 1400 aa21.46■■□□□ 1.03
MRPL55-224ENST00000464148 MBD5Q9P267 1494 aa21.45■■□□□ 1.03
MRPL55-224ENST00000464148 POLR1AO95602 1720 aaPredicted RBP21.44■■□□□ 1.02
MRPL55-224ENST00000464148 KIF3BO15066 747 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms