RNA–Protein interactions for RNA: ENST00000463003.1

CHAMP1-202, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

TSL 3

Gene CHAMP1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-202ENST00000463003 SPNS2Q8IVW8 549 aa11.94□□□□□ -0.5
CHAMP1-202ENST00000463003 ZSWIM6Q9HCJ5 1215 aa11.94□□□□□ -0.5
CHAMP1-202ENST00000463003 POTEB3A0JP26 581 aa11.92□□□□□ -0.5
CHAMP1-202ENST00000463003 RGL2O15211 777 aa11.92□□□□□ -0.5
CHAMP1-202ENST00000463003 POTEBQ6S5H4 581 aa11.92□□□□□ -0.5
CHAMP1-202ENST00000463003 MFRPQ9BY79 579 aa11.92□□□□□ -0.5
CHAMP1-202ENST00000463003 MMRN1Q13201 1228 aa11.9□□□□□ -0.5
CHAMP1-202ENST00000463003 ERBB3P21860 1342 aa11.89□□□□□ -0.51
CHAMP1-202ENST00000463003 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
CHAMP1-202ENST00000463003 KRTAP3-2Q9BYR7 98 aa11.88□□□□□ -0.51
CHAMP1-202ENST00000463003 GPR153Q6NV75 609 aa11.82□□□□□ -0.52
CHAMP1-202ENST00000463003 VARS2Q5ST30 1063 aaKnown RBP11.81□□□□□ -0.52
CHAMP1-202ENST00000463003 KIF3CO14782 793 aa11.78□□□□□ -0.52
CHAMP1-202ENST00000463003 C2orf72A6NCS6 295 aa11.76□□□□□ -0.53
CHAMP1-202ENST00000463003 ARSIQ5FYB1 569 aa11.76□□□□□ -0.53
CHAMP1-202ENST00000463003 ZNF687Q8N1G0 1237 aa11.74□□□□□ -0.53
CHAMP1-202ENST00000463003 TMC2Q8TDI7 906 aa11.74□□□□□ -0.53
CHAMP1-202ENST00000463003 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
CHAMP1-202ENST00000463003 ZNF316A6NFI3 1004 aaPredicted RBP11.69□□□□□ -0.54
CHAMP1-202ENST00000463003 SLC34A2O95436 690 aa11.69□□□□□ -0.54
CHAMP1-202ENST00000463003 PPP1R37O75864 691 aa11.68□□□□□ -0.54
CHAMP1-202ENST00000463003 KHSRPQ92945 711 aaKnown RBP eCLIP11.67□□□□□ -0.54
CHAMP1-202ENST00000463003 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
CHAMP1-202ENST00000463003 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
CHAMP1-202ENST00000463003 NUDT7P0C024 238 aa11.62□□□□□ -0.55
CHAMP1-202ENST00000463003 PTGER2P43116 358 aa11.61□□□□□ -0.55
CHAMP1-202ENST00000463003 RNF166Q96A37 237 aaPredicted RBP11.6□□□□□ -0.55
CHAMP1-202ENST00000463003 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
CHAMP1-202ENST00000463003 DNAJC5Q9H3Z4 198 aa11.59□□□□□ -0.55
CHAMP1-202ENST00000463003 PBX2P40425 430 aa11.58□□□□□ -0.56
CHAMP1-202ENST00000463003 RTN4Q9NQC3 1192 aaKnown RBP11.58□□□□□ -0.56
CHAMP1-202ENST00000463003 MYT1LQ9UL68 1186 aa11.58□□□□□ -0.56
CHAMP1-202ENST00000463003 FOXK1P85037 733 aa11.56□□□□□ -0.56
CHAMP1-202ENST00000463003 GPHNQ9NQX3 736 aaPredicted RBP11.56□□□□□ -0.56
CHAMP1-202ENST00000463003 LHX6Q9UPM6 363 aa11.56□□□□□ -0.56
CHAMP1-202ENST00000463003 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
CHAMP1-202ENST00000463003 ANKRD13DQ6ZTN6 518 aa11.55□□□□□ -0.56
CHAMP1-202ENST00000463003 PSDA5PKW4 1024 aaPredicted RBP11.54□□□□□ -0.56
CHAMP1-202ENST00000463003 AMER1Q5JTC6 1135 aaPredicted RBP11.54□□□□□ -0.56
CHAMP1-202ENST00000463003 PTCD2Q8WV60 388 aaKnown RBP11.54□□□□□ -0.56
CHAMP1-202ENST00000463003 PLPP6Q8IY26 295 aa11.53□□□□□ -0.56
CHAMP1-202ENST00000463003 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
CHAMP1-202ENST00000463003 TBC1D12O60347 775 aa11.49□□□□□ -0.57
CHAMP1-202ENST00000463003 DSG2Q14126 1118 aa11.49□□□□□ -0.57
CHAMP1-202ENST00000463003 KDM4FA0A1W2PPD8 638 aa11.46□□□□□ -0.57
CHAMP1-202ENST00000463003 ARHGAP33O14559 1287 aa11.44□□□□□ -0.58
CHAMP1-202ENST00000463003 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
CHAMP1-202ENST00000463003 AXIN2Q9Y2T1 843 aa11.44□□□□□ -0.58
CHAMP1-202ENST00000463003 PPP4R3BQ5MIZ7 849 aa11.41□□□□□ -0.58
CHAMP1-202ENST00000463003 CRISPLD2Q9H0B8 497 aa11.41□□□□□ -0.58
CHAMP1-202ENST00000463003 PDE4AP27815 886 aa11.38□□□□□ -0.59
CHAMP1-202ENST00000463003 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
CHAMP1-202ENST00000463003 PPP1R15BQ5SWA1 713 aa11.37□□□□□ -0.59
CHAMP1-202ENST00000463003 ADGRD1Q6QNK2 874 aa11.37□□□□□ -0.59
CHAMP1-202ENST00000463003 TK2O00142 265 aa11.36□□□□□ -0.59
CHAMP1-202ENST00000463003 GTPBP6O43824 516 aaPredicted RBP11.35□□□□□ -0.59
CHAMP1-202ENST00000463003 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
CHAMP1-202ENST00000463003 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
CHAMP1-202ENST00000463003 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHAMP1-202ENST00000463003 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
CHAMP1-202ENST00000463003 PSEN2P49810 448 aa11.31□□□□□ -0.6
CHAMP1-202ENST00000463003 DMRTA1Q5VZB9 504 aa11.3□□□□□ -0.6
CHAMP1-202ENST00000463003 DDX27Q96GQ7 796 aaKnown RBP11.28□□□□□ -0.6
CHAMP1-202ENST00000463003 HCSTQ9UBK5 93 aa11.28□□□□□ -0.6
CHAMP1-202ENST00000463003 HRO43593 1189 aa11.27□□□□□ -0.61
CHAMP1-202ENST00000463003 ZNF454Q8N9F8 522 aa11.27□□□□□ -0.61
CHAMP1-202ENST00000463003 KCNK17Q96T54 332 aa11.27□□□□□ -0.61
CHAMP1-202ENST00000463003 LARP6Q9BRS8 491 aaKnown RBP11.27□□□□□ -0.61
CHAMP1-202ENST00000463003 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
CHAMP1-202ENST00000463003 MFSD10Q14728 455 aa11.24□□□□□ -0.61
CHAMP1-202ENST00000463003 BCL2L12Q9HB09 334 aa11.24□□□□□ -0.61
CHAMP1-202ENST00000463003 FOSBP53539 338 aa11.23□□□□□ -0.61
CHAMP1-202ENST00000463003 ANO8Q9HCE9 1232 aaPredicted RBP11.23□□□□□ -0.61
CHAMP1-202ENST00000463003 EVI5O60447 810 aa11.22□□□□□ -0.61
CHAMP1-202ENST00000463003 JPH4Q96JJ6 628 aa11.22□□□□□ -0.61
CHAMP1-202ENST00000463003 PTPREP23469 700 aa11.2□□□□□ -0.62
CHAMP1-202ENST00000463003 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
CHAMP1-202ENST00000463003 SLC4A5Q9BY07 1137 aa11.2□□□□□ -0.62
CHAMP1-202ENST00000463003 VPS9D1Q9Y2B5 631 aa11.19□□□□□ -0.62
CHAMP1-202ENST00000463003 PLA2G2EQ9NZK7 142 aa11.17□□□□□ -0.62
CHAMP1-202ENST00000463003 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
CHAMP1-202ENST00000463003 KCTD12Q96CX2 325 aaKnown RBP11.16□□□□□ -0.62
CHAMP1-202ENST00000463003 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
CHAMP1-202ENST00000463003 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
CHAMP1-202ENST00000463003 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
CHAMP1-202ENST00000463003 ADAM33Q9BZ11 813 aa11.11□□□□□ -0.63
CHAMP1-202ENST00000463003 BHMG1C9JSJ3 638 aaPredicted RBP11.09□□□□□ -0.63
CHAMP1-202ENST00000463003 BBXQ8WY36 941 aaPredicted RBP11.09□□□□□ -0.63
CHAMP1-202ENST00000463003 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
CHAMP1-202ENST00000463003 GOLGA8CPA6NN73 597 aa11.07□□□□□ -0.64
CHAMP1-202ENST00000463003 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
CHAMP1-202ENST00000463003 NBPF3Q9H094 633 aa11.07□□□□□ -0.64
CHAMP1-202ENST00000463003 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
CHAMP1-202ENST00000463003 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
CHAMP1-202ENST00000463003 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
CHAMP1-202ENST00000463003 PHF14O94880 888 aa11.05□□□□□ -0.64
CHAMP1-202ENST00000463003 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
CHAMP1-202ENST00000463003 PTPN5P54829 565 aa11.03□□□□□ -0.64
CHAMP1-202ENST00000463003 THSD4Q6ZMP0 1018 aa11.03□□□□□ -0.64
CHAMP1-202ENST00000463003 WNT2BQ93097 391 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms