RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
PTPN7-204ENST00000462815 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
PTPN7-204ENST00000462815 ARHGEF12Q9NZN5 1544 aa18.63■□□□□ 0.57
PTPN7-204ENST00000462815 TROQ12816 1431 aaPredicted RBP18.62■□□□□ 0.57
PTPN7-204ENST00000462815 KDM5CP41229 1560 aa18.62■□□□□ 0.57
PTPN7-204ENST00000462815 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
PTPN7-204ENST00000462815 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
PTPN7-204ENST00000462815 ATP10AO60312 1499 aa18.58■□□□□ 0.57
PTPN7-204ENST00000462815 C9orf84Q5VXU9 1444 aa18.58■□□□□ 0.57
PTPN7-204ENST00000462815 UBTFP17480 764 aaKnown RBP18.58■□□□□ 0.56
PTPN7-204ENST00000462815 FBXO41Q8TF61 875 aa18.58■□□□□ 0.56
PTPN7-204ENST00000462815 EHMT2Q96KQ7 1210 aa18.57■□□□□ 0.56
PTPN7-204ENST00000462815 CDC42BPBQ9Y5S2 1711 aa18.56■□□□□ 0.56
PTPN7-204ENST00000462815 ZNF518AQ6AHZ1 1483 aa18.56■□□□□ 0.56
PTPN7-204ENST00000462815 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
PTPN7-204ENST00000462815 DIP2CQ9Y2E4 1556 aa18.55■□□□□ 0.56
PTPN7-204ENST00000462815 REREQ9P2R6 1566 aa18.54■□□□□ 0.56
PTPN7-204ENST00000462815 ARHGAP5Q13017 1502 aa18.54■□□□□ 0.56
PTPN7-204ENST00000462815 PREX2Q70Z35 1606 aa18.53■□□□□ 0.56
PTPN7-204ENST00000462815 HSPA2P54652 639 aa18.53■□□□□ 0.56
PTPN7-204ENST00000462815 CDK11AQ9UQ88 783 aaPredicted RBP18.52■□□□□ 0.56
PTPN7-204ENST00000462815 ABCA6Q8N139 1617 aa18.52■□□□□ 0.55
PTPN7-204ENST00000462815 CASKIN1Q8WXD9 1431 aa18.51■□□□□ 0.55
PTPN7-204ENST00000462815 ABCC1P33527 1531 aa18.51■□□□□ 0.55
PTPN7-204ENST00000462815 CLIP1P30622 1438 aa18.5■□□□□ 0.55
PTPN7-204ENST00000462815 MLECQ14165 292 aa18.5■□□□□ 0.55
PTPN7-204ENST00000462815 ATP1B4Q9UN42 357 aaPredicted RBP18.5■□□□□ 0.55
PTPN7-204ENST00000462815 AFAP1Q8N556 730 aa18.49■□□□□ 0.55
PTPN7-204ENST00000462815 MLH3Q9UHC1 1453 aa18.49■□□□□ 0.55
PTPN7-204ENST00000462815 PREX1Q8TCU6 1659 aa18.49■□□□□ 0.55
PTPN7-204ENST00000462815 ITSN2Q9NZM3 1697 aa18.48■□□□□ 0.55
PTPN7-204ENST00000462815 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
PTPN7-204ENST00000462815 TRAPPC8Q9Y2L5 1435 aa18.47■□□□□ 0.55
PTPN7-204ENST00000462815 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
PTPN7-204ENST00000462815 AGLP35573 1532 aa18.45■□□□□ 0.54
PTPN7-204ENST00000462815 PLPPR3Q6T4P5 718 aa18.45■□□□□ 0.54
PTPN7-204ENST00000462815 KIDINS220Q9ULH0 1771 aa18.44■□□□□ 0.54
PTPN7-204ENST00000462815 FYCO1Q9BQS8 1478 aa18.44■□□□□ 0.54
PTPN7-204ENST00000462815 STRCQ7RTU9 1775 aa18.42■□□□□ 0.54
PTPN7-204ENST00000462815 CEBPAP49715 358 aaPredicted RBP18.42■□□□□ 0.54
PTPN7-204ENST00000462815 C3P01024 1663 aa18.41■□□□□ 0.54
PTPN7-204ENST00000462815 SAMD9LQ8IVG5 1584 aa18.4■□□□□ 0.54
PTPN7-204ENST00000462815 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
PTPN7-204ENST00000462815 SYCP2Q9BX26 1530 aa18.35■□□□□ 0.53
PTPN7-204ENST00000462815 UHRF1BP1Q6BDS2 1440 aa18.35■□□□□ 0.53
PTPN7-204ENST00000462815 CERKQ8TCT0 537 aa18.34■□□□□ 0.53
PTPN7-204ENST00000462815 PLXNC1O60486 1568 aa18.32■□□□□ 0.52
PTPN7-204ENST00000462815 INO80Q9ULG1 1556 aaPredicted RBP18.32■□□□□ 0.52
PTPN7-204ENST00000462815 SETD1BQ9UPS6 1966 aaKnown RBP18.31■□□□□ 0.52
PTPN7-204ENST00000462815 MROH2AA6NES4 1674 aa18.3■□□□□ 0.52
PTPN7-204ENST00000462815 KIAA1107Q9UPP5 1409 aa18.29■□□□□ 0.52
PTPN7-204ENST00000462815 CNTLNQ9NXG0 1405 aa18.28■□□□□ 0.52
PTPN7-204ENST00000462815 ATP7AQ04656 1500 aa18.28■□□□□ 0.52
PTPN7-204ENST00000462815 PTPRTO14522 1441 aa18.27■□□□□ 0.52
PTPN7-204ENST00000462815 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
PTPN7-204ENST00000462815 TIAM1Q13009 1591 aa18.25■□□□□ 0.51
PTPN7-204ENST00000462815 NPATQ14207 1427 aa18.24■□□□□ 0.51
PTPN7-204ENST00000462815 NCOA1Q15788 1441 aa18.24■□□□□ 0.51
PTPN7-204ENST00000462815 LTBP4Q8N2S1 1624 aa18.24■□□□□ 0.51
PTPN7-204ENST00000462815 SUPT6HQ7KZ85 1726 aaKnown RBP18.24■□□□□ 0.51
PTPN7-204ENST00000462815 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
PTPN7-204ENST00000462815 HNRNPMP52272 730 aaKnown RBP eCLIP18.23■□□□□ 0.51
PTPN7-204ENST00000462815 DMRT2Q9Y5R5 561 aa18.22■□□□□ 0.51
PTPN7-204ENST00000462815 SPAG9O60271 1321 aaKnown RBP18.22■□□□□ 0.51
PTPN7-204ENST00000462815 A2MP01023 1474 aa18.21■□□□□ 0.51
PTPN7-204ENST00000462815 MBD5Q9P267 1494 aa18.21■□□□□ 0.51
PTPN7-204ENST00000462815 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
PTPN7-204ENST00000462815 CLTCQ00610 1675 aaKnown RBP18.21■□□□□ 0.51
PTPN7-204ENST00000462815 ZNF142P52746 1687 aaPredicted RBP18.2■□□□□ 0.5
PTPN7-204ENST00000462815 ZMYM3Q14202 1370 aa18.19■□□□□ 0.5
PTPN7-204ENST00000462815 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
PTPN7-204ENST00000462815 EHBP1L1Q8N3D4 1523 aa18.19■□□□□ 0.5
PTPN7-204ENST00000462815 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
PTPN7-204ENST00000462815 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
PTPN7-204ENST00000462815 CAMSAP1Q5T5Y3 1602 aa18.18■□□□□ 0.5
PTPN7-204ENST00000462815 ADGBQ8N7X0 1667 aa18.18■□□□□ 0.5
PTPN7-204ENST00000462815 PTPRKQ15262 1439 aa18.17■□□□□ 0.5
PTPN7-204ENST00000462815 MTUS2Q5JR59 1369 aa18.17■□□□□ 0.5
PTPN7-204ENST00000462815 CEP162Q5TB80 1403 aa18.16■□□□□ 0.5
PTPN7-204ENST00000462815 ESF1Q9H501 851 aaKnown RBP18.16■□□□□ 0.5
PTPN7-204ENST00000462815 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
PTPN7-204ENST00000462815 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.5
PTPN7-204ENST00000462815 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
PTPN7-204ENST00000462815 RTEL1-TNFRSF6BF6WH68 1400 aa18.13■□□□□ 0.49
PTPN7-204ENST00000462815 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
PTPN7-204ENST00000462815 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
PTPN7-204ENST00000462815 NCOA2Q15596 1464 aa18.07■□□□□ 0.48
PTPN7-204ENST00000462815 DHX29Q7Z478 1369 aaKnown RBP18.07■□□□□ 0.48
PTPN7-204ENST00000462815 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
PTPN7-204ENST00000462815 CCDC141Q6ZP82 1450 aa18.07■□□□□ 0.48
PTPN7-204ENST00000462815 NCKAP5LQ9HCH0 1330 aa18.06■□□□□ 0.48
PTPN7-204ENST00000462815 GGT6Q6P531 493 aa18.06■□□□□ 0.48
PTPN7-204ENST00000462815 PPP6R1Q9UPN7 881 aa18.06■□□□□ 0.48
PTPN7-204ENST00000462815 DNMT1P26358 1616 aaKnown RBP18.05■□□□□ 0.48
PTPN7-204ENST00000462815 FAM135AQ9P2D6 1515 aa18.04■□□□□ 0.48
PTPN7-204ENST00000462815 A2ML1A8K2U0 1454 aa18.04■□□□□ 0.48
PTPN7-204ENST00000462815 ARHGEF5Q12774 1597 aa18.03■□□□□ 0.48
PTPN7-204ENST00000462815 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
PTPN7-204ENST00000462815 ZNF335Q9H4Z2 1342 aaPredicted RBP18.02■□□□□ 0.48
PTPN7-204ENST00000462815 PZPP20742 1482 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms