RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 CCDC7Q96M83 1385 aa16.2■□□□□ 0.18
PDZRN3-203ENST00000462146 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
PDZRN3-203ENST00000462146 NBPF8Q3BBV2 869 aa16.18■□□□□ 0.18
PDZRN3-203ENST00000462146 B4GALNT3Q6L9W6 998 aa16.18■□□□□ 0.18
PDZRN3-203ENST00000462146 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
PDZRN3-203ENST00000462146 PPP4R2Q9NY27 417 aa16.17■□□□□ 0.18
PDZRN3-203ENST00000462146 EPRSP07814 1512 aaKnown RBP16.17■□□□□ 0.18
PDZRN3-203ENST00000462146 AKNAQ7Z591 1439 aa16.15■□□□□ 0.18
PDZRN3-203ENST00000462146 POLR1AO95602 1720 aaPredicted RBP16.14■□□□□ 0.17
PDZRN3-203ENST00000462146 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
PDZRN3-203ENST00000462146 TEX14Q8IWB6 1497 aa16.13■□□□□ 0.17
PDZRN3-203ENST00000462146 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
PDZRN3-203ENST00000462146 KIF7Q2M1P5 1343 aa16.12■□□□□ 0.17
PDZRN3-203ENST00000462146 ZBED9Q6R2W3 1325 aa16.12■□□□□ 0.17
PDZRN3-203ENST00000462146 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
PDZRN3-203ENST00000462146 RPRD2Q5VT52 1461 aaKnown RBP16.11■□□□□ 0.17
PDZRN3-203ENST00000462146 ANKRD30BQ9BXX2 1392 aa16.11■□□□□ 0.17
PDZRN3-203ENST00000462146 TARBP1Q13395 1621 aaKnown RBP16.1■□□□□ 0.17
PDZRN3-203ENST00000462146 IQGAP2Q13576 1575 aa16.1■□□□□ 0.17
PDZRN3-203ENST00000462146 ERICH6BQ5W0A0 696 aa16.1■□□□□ 0.17
PDZRN3-203ENST00000462146 MIA2Q96PC5 1412 aa16.09■□□□□ 0.17
PDZRN3-203ENST00000462146 SENP3-EIF4A1A0A087X0R7 540 aa16.09■□□□□ 0.17
PDZRN3-203ENST00000462146 ZNF644Q9H582 1327 aaPredicted RBP16.09■□□□□ 0.17
PDZRN3-203ENST00000462146 DAPK1P53355 1430 aa16.08■□□□□ 0.16
PDZRN3-203ENST00000462146 SPATA31E1Q6ZUB1 1445 aa16.08■□□□□ 0.16
PDZRN3-203ENST00000462146 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
PDZRN3-203ENST00000462146 ABCC5O15440 1437 aa16.05■□□□□ 0.16
PDZRN3-203ENST00000462146 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
PDZRN3-203ENST00000462146 BCORL1Q5H9F3 1711 aa16.04■□□□□ 0.16
PDZRN3-203ENST00000462146 POLR3GLQ9BT43 218 aa16.03■□□□□ 0.16
PDZRN3-203ENST00000462146 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
PDZRN3-203ENST00000462146 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
PDZRN3-203ENST00000462146 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
PDZRN3-203ENST00000462146 ROCK1Q13464 1354 aa16■□□□□ 0.15
PDZRN3-203ENST00000462146 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
PDZRN3-203ENST00000462146 PZPP20742 1482 aa15.99■□□□□ 0.15
PDZRN3-203ENST00000462146 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
PDZRN3-203ENST00000462146 PAK3O75914 559 aaPredicted RBP15.96■□□□□ 0.15
PDZRN3-203ENST00000462146 MBD5Q9P267 1494 aa15.96■□□□□ 0.15
PDZRN3-203ENST00000462146 NUP153P49790 1475 aaKnown RBP15.95■□□□□ 0.14
PDZRN3-203ENST00000462146 USP47Q96K76 1375 aa15.95■□□□□ 0.14
PDZRN3-203ENST00000462146 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
PDZRN3-203ENST00000462146 KIAA0556O60303 1618 aa15.94■□□□□ 0.14
PDZRN3-203ENST00000462146 KDM5CP41229 1560 aa15.94■□□□□ 0.14
PDZRN3-203ENST00000462146 KIF14Q15058 1648 aa15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 DISP1Q96F81 1524 aa15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 RAPGEF6Q8TEU7 1601 aa15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 NOP58Q9Y2X3 529 aaKnown RBP15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 CAMSAP2Q08AD1 1489 aa15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 ZNF608Q9ULD9 1512 aaPredicted RBP15.92■□□□□ 0.14
PDZRN3-203ENST00000462146 NBR1Q14596 966 aa15.91■□□□□ 0.14
PDZRN3-203ENST00000462146 DEKP35659 375 aaKnown RBP15.91■□□□□ 0.14
PDZRN3-203ENST00000462146 CCDC136Q96JN2 1154 aa15.9■□□□□ 0.14
PDZRN3-203ENST00000462146 PRG4Q92954 1404 aaPredicted RBP15.9■□□□□ 0.14
PDZRN3-203ENST00000462146 EIF4G3O43432 1585 aaKnown RBP15.9■□□□□ 0.14
PDZRN3-203ENST00000462146 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
PDZRN3-203ENST00000462146 ZNF777Q9ULD5 760 aaPredicted RBP15.89■□□□□ 0.13
PDZRN3-203ENST00000462146 KIAA1107Q9UPP5 1409 aa15.88■□□□□ 0.13
PDZRN3-203ENST00000462146 PKD2Q13563 968 aa15.88■□□□□ 0.13
PDZRN3-203ENST00000462146 CROCC2H7BZ55 1655 aa15.88■□□□□ 0.13
PDZRN3-203ENST00000462146 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
PDZRN3-203ENST00000462146 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
PDZRN3-203ENST00000462146 ITSN2Q9NZM3 1697 aa15.85■□□□□ 0.13
PDZRN3-203ENST00000462146 TMC1Q8TDI8 760 aa15.84■□□□□ 0.13
PDZRN3-203ENST00000462146 GPATCH8Q9UKJ3 1502 aaKnown RBP15.83■□□□□ 0.12
PDZRN3-203ENST00000462146 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
PDZRN3-203ENST00000462146 TROQ12816 1431 aaPredicted RBP15.82■□□□□ 0.12
PDZRN3-203ENST00000462146 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
PDZRN3-203ENST00000462146 RALGAPBQ86X10 1494 aa15.81■□□□□ 0.12
PDZRN3-203ENST00000462146 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
PDZRN3-203ENST00000462146 ADGRL2O95490 1459 aa15.8■□□□□ 0.12
PDZRN3-203ENST00000462146 KDM2AQ9Y2K7 1162 aa15.8■□□□□ 0.12
PDZRN3-203ENST00000462146 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
PDZRN3-203ENST00000462146 ST20-MTHFSA0A0A6YYL1 179 aa15.79■□□□□ 0.12
PDZRN3-203ENST00000462146 IPO9Q96P70 1041 aaKnown RBP15.79■□□□□ 0.12
PDZRN3-203ENST00000462146 MYT1LQ9UL68 1186 aa15.79■□□□□ 0.12
PDZRN3-203ENST00000462146 ANP32AP39687 249 aaKnown RBP15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 ANKRD50Q9ULJ7 1429 aa15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 CDC42BPAQ5VT25 1732 aa15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 E9PCH4 1651 aa15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 UHRF1BP1Q6BDS2 1440 aa15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 KIF15Q9NS87 1388 aa15.78■□□□□ 0.12
PDZRN3-203ENST00000462146 ADCY10Q96PN6 1610 aa15.77■□□□□ 0.12
PDZRN3-203ENST00000462146 ANKRD30AQ9BXX3 1397 aa15.77■□□□□ 0.11
PDZRN3-203ENST00000462146 ARID4BQ4LE39 1312 aaPredicted RBP15.77■□□□□ 0.11
PDZRN3-203ENST00000462146 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
PDZRN3-203ENST00000462146 NUP155O75694 1391 aa15.76■□□□□ 0.11
PDZRN3-203ENST00000462146 EXOC6Q8TAG9 804 aa15.76■□□□□ 0.11
PDZRN3-203ENST00000462146 ROCK2O75116 1388 aaKnown RBP15.76■□□□□ 0.11
PDZRN3-203ENST00000462146 RRP1P56182 461 aaKnown RBP15.74■□□□□ 0.11
PDZRN3-203ENST00000462146 MYBBP1AQ9BQG0 1328 aaKnown RBP15.74■□□□□ 0.11
PDZRN3-203ENST00000462146 NPM2Q86SE8 214 aaKnown RBP15.74■□□□□ 0.11
PDZRN3-203ENST00000462146 MAGI1Q96QZ7 1491 aaPredicted RBP15.73■□□□□ 0.11
PDZRN3-203ENST00000462146 DCAF11Q8TEB1 546 aa15.73■□□□□ 0.11
PDZRN3-203ENST00000462146 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
PDZRN3-203ENST00000462146 BRD4O60885 1362 aaPredicted RBP15.72■□□□□ 0.11
PDZRN3-203ENST00000462146 CEP170Q5SW79 1584 aa15.72■□□□□ 0.11
PDZRN3-203ENST00000462146 ARHGEF12Q9NZN5 1544 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms