RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 PLCH2O75038 1416 aa20.1■□□□□ 0.81
HCFC1-204ENST00000461098 SCAPERQ9BY12 1400 aa20.1■□□□□ 0.81
HCFC1-204ENST00000461098 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
HCFC1-204ENST00000461098 ATP10AO60312 1499 aa20.07■□□□□ 0.8
HCFC1-204ENST00000461098 EEA1Q15075 1411 aa20.05■□□□□ 0.8
HCFC1-204ENST00000461098 PREX1Q8TCU6 1659 aa20.05■□□□□ 0.8
HCFC1-204ENST00000461098 STRCQ7RTU9 1775 aa20.05■□□□□ 0.8
HCFC1-204ENST00000461098 CEBPAP49715 358 aaPredicted RBP20.04■□□□□ 0.8
HCFC1-204ENST00000461098 C9orf84Q5VXU9 1444 aa20.03■□□□□ 0.8
HCFC1-204ENST00000461098 ILDR2Q71H61 639 aa20.01■□□□□ 0.79
HCFC1-204ENST00000461098 MYO5CQ9NQX4 1742 aa19.99■□□□□ 0.79
HCFC1-204ENST00000461098 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
HCFC1-204ENST00000461098 KDM5CP41229 1560 aa19.96■□□□□ 0.79
HCFC1-204ENST00000461098 KIF14Q15058 1648 aa19.96■□□□□ 0.79
HCFC1-204ENST00000461098 AFAP1Q8N556 730 aa19.95■□□□□ 0.78
HCFC1-204ENST00000461098 ZNF518AQ6AHZ1 1483 aa19.94■□□□□ 0.78
HCFC1-204ENST00000461098 DMRT2Q9Y5R5 561 aa19.93■□□□□ 0.78
HCFC1-204ENST00000461098 SETD1BQ9UPS6 1966 aaKnown RBP19.93■□□□□ 0.78
HCFC1-204ENST00000461098 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
HCFC1-204ENST00000461098 DIP2CQ9Y2E4 1556 aa19.92■□□□□ 0.78
HCFC1-204ENST00000461098 UHRF1BP1Q6BDS2 1440 aa19.92■□□□□ 0.78
HCFC1-204ENST00000461098 REREQ9P2R6 1566 aa19.91■□□□□ 0.78
HCFC1-204ENST00000461098 SOCS7O14512 581 aa19.9■□□□□ 0.78
HCFC1-204ENST00000461098 C3P01024 1663 aa19.89■□□□□ 0.77
HCFC1-204ENST00000461098 FMN1Q68DA7 1419 aa19.89■□□□□ 0.77
HCFC1-204ENST00000461098 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
HCFC1-204ENST00000461098 ARHGAP5Q13017 1502 aa19.88■□□□□ 0.77
HCFC1-204ENST00000461098 PTPRTO14522 1441 aa19.88■□□□□ 0.77
HCFC1-204ENST00000461098 TROQ12816 1431 aaPredicted RBP19.88■□□□□ 0.77
HCFC1-204ENST00000461098 LRRIQ1Q96JM4 1722 aa19.88■□□□□ 0.77
HCFC1-204ENST00000461098 ABCA6Q8N139 1617 aa19.87■□□□□ 0.77
HCFC1-204ENST00000461098 ATP1B4Q9UN42 357 aaPredicted RBP19.87■□□□□ 0.77
HCFC1-204ENST00000461098 MLH3Q9UHC1 1453 aa19.86■□□□□ 0.77
HCFC1-204ENST00000461098 CDC42BPBQ9Y5S2 1711 aa19.86■□□□□ 0.77
HCFC1-204ENST00000461098 CDK11AQ9UQ88 783 aaPredicted RBP19.86■□□□□ 0.77
HCFC1-204ENST00000461098 LTBP4Q8N2S1 1624 aa19.86■□□□□ 0.77
HCFC1-204ENST00000461098 AGLP35573 1532 aa19.84■□□□□ 0.77
HCFC1-204ENST00000461098 TRAPPC8Q9Y2L5 1435 aa19.83■□□□□ 0.76
HCFC1-204ENST00000461098 SPATA31D1Q6ZQQ2 1576 aa19.8■□□□□ 0.76
HCFC1-204ENST00000461098 ABCC1P33527 1531 aa19.8■□□□□ 0.76
HCFC1-204ENST00000461098 CLIP1P30622 1438 aa19.79■□□□□ 0.76
HCFC1-204ENST00000461098 NCOA1Q15788 1441 aa19.79■□□□□ 0.76
HCFC1-204ENST00000461098 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
HCFC1-204ENST00000461098 MYT1LQ9UL68 1186 aa19.79■□□□□ 0.76
HCFC1-204ENST00000461098 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
HCFC1-204ENST00000461098 PREX2Q70Z35 1606 aa19.78■□□□□ 0.76
HCFC1-204ENST00000461098 UBTFP17480 764 aaKnown RBP19.78■□□□□ 0.76
HCFC1-204ENST00000461098 IQSEC2Q5JU85 1478 aa19.77■□□□□ 0.76
HCFC1-204ENST00000461098 ITSN2Q9NZM3 1697 aa19.77■□□□□ 0.76
HCFC1-204ENST00000461098 CNTLNQ9NXG0 1405 aa19.73■□□□□ 0.75
HCFC1-204ENST00000461098 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
HCFC1-204ENST00000461098 CAMSAP1Q5T5Y3 1602 aa19.71■□□□□ 0.75
HCFC1-204ENST00000461098 CDC42BPAQ5VT25 1732 aa19.71■□□□□ 0.75
HCFC1-204ENST00000461098 NPATQ14207 1427 aa19.7■□□□□ 0.74
HCFC1-204ENST00000461098 MROH2AA6NES4 1674 aa19.7■□□□□ 0.74
HCFC1-204ENST00000461098 SAMD9LQ8IVG5 1584 aa19.69■□□□□ 0.74
HCFC1-204ENST00000461098 ZMYM3Q14202 1370 aa19.69■□□□□ 0.74
HCFC1-204ENST00000461098 CASKIN1Q8WXD9 1431 aa19.67■□□□□ 0.74
HCFC1-204ENST00000461098 ZNF335Q9H4Z2 1342 aaPredicted RBP19.66■□□□□ 0.74
HCFC1-204ENST00000461098 NCKAP5LQ9HCH0 1330 aa19.66■□□□□ 0.74
HCFC1-204ENST00000461098 CCDC18Q5T9S5 1454 aa19.66■□□□□ 0.74
HCFC1-204ENST00000461098 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
HCFC1-204ENST00000461098 SYCP2Q9BX26 1530 aa19.62■□□□□ 0.73
HCFC1-204ENST00000461098 ZNF142P52746 1687 aaPredicted RBP19.62■□□□□ 0.73
HCFC1-204ENST00000461098 PLXNC1O60486 1568 aa19.61■□□□□ 0.73
HCFC1-204ENST00000461098 CLTCQ00610 1675 aaKnown RBP19.61■□□□□ 0.73
HCFC1-204ENST00000461098 MYO3AQ8NEV4 1616 aa19.61■□□□□ 0.73
HCFC1-204ENST00000461098 GPATCH8Q9UKJ3 1502 aaKnown RBP19.61■□□□□ 0.73
HCFC1-204ENST00000461098 PLA2R1Q13018 1463 aa19.6■□□□□ 0.73
HCFC1-204ENST00000461098 TCOF1Q13428 1488 aaKnown RBP19.6■□□□□ 0.73
HCFC1-204ENST00000461098 HNRNPMP52272 730 aaKnown RBP eCLIP19.6■□□□□ 0.73
HCFC1-204ENST00000461098 PTPRKQ15262 1439 aa19.59■□□□□ 0.73
HCFC1-204ENST00000461098 SPAG9O60271 1321 aaKnown RBP19.59■□□□□ 0.73
HCFC1-204ENST00000461098 ZNF777Q9ULD5 760 aaPredicted RBP19.59■□□□□ 0.73
HCFC1-204ENST00000461098 UBAP1LF5GYI3 381 aa19.58■□□□□ 0.72
HCFC1-204ENST00000461098 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
HCFC1-204ENST00000461098 CEP170BQ9Y4F5 1589 aaPredicted RBP19.57■□□□□ 0.72
HCFC1-204ENST00000461098 ATP7AQ04656 1500 aa19.57■□□□□ 0.72
HCFC1-204ENST00000461098 PKD2Q13563 968 aa19.57■□□□□ 0.72
HCFC1-204ENST00000461098 A2MP01023 1474 aa19.55■□□□□ 0.72
HCFC1-204ENST00000461098 KIAA1107Q9UPP5 1409 aa19.55■□□□□ 0.72
HCFC1-204ENST00000461098 FYCO1Q9BQS8 1478 aa19.54■□□□□ 0.72
HCFC1-204ENST00000461098 CHIC1Q5VXU3 224 aa19.51■□□□□ 0.71
HCFC1-204ENST00000461098 GGT6Q6P531 493 aa19.51■□□□□ 0.71
HCFC1-204ENST00000461098 DNMT1P26358 1616 aaKnown RBP19.49■□□□□ 0.71
HCFC1-204ENST00000461098 PLEKHH2Q8IVE3 1493 aa19.48■□□□□ 0.71
HCFC1-204ENST00000461098 CFDP1Q9UEE9 299 aaPredicted RBP19.48■□□□□ 0.71
HCFC1-204ENST00000461098 PPP6R1Q9UPN7 881 aa19.48■□□□□ 0.71
HCFC1-204ENST00000461098 A2ML1A8K2U0 1454 aa19.47■□□□□ 0.71
HCFC1-204ENST00000461098 ADGBQ8N7X0 1667 aa19.46■□□□□ 0.71
HCFC1-204ENST00000461098 NEURL4Q96JN8 1562 aa19.44■□□□□ 0.7
HCFC1-204ENST00000461098 MBD5Q9P267 1494 aa19.44■□□□□ 0.7
HCFC1-204ENST00000461098 HSPA1LP34931 641 aa19.44■□□□□ 0.7
HCFC1-204ENST00000461098 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
HCFC1-204ENST00000461098 CCNB3Q8WWL7 1395 aa19.44■□□□□ 0.7
HCFC1-204ENST00000461098 MED1Q15648 1581 aaPredicted RBP19.43■□□□□ 0.7
HCFC1-204ENST00000461098 POLR1AO95602 1720 aaPredicted RBP19.4■□□□□ 0.7
HCFC1-204ENST00000461098 FBXO31Q5XUX0 539 aaPredicted RBP19.4■□□□□ 0.7
HCFC1-204ENST00000461098 SHANK2Q9UPX8 1470 aa19.4■□□□□ 0.7
HCFC1-204ENST00000461098 CPS1P31327 1500 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms