RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
PCYT1A-213ENST00000460827 TTC37Q6PGP7 1564 aa19.82■□□□□ 0.76
PCYT1A-213ENST00000460827 EFCAB5A4FU69 1503 aa19.8■□□□□ 0.76
PCYT1A-213ENST00000460827 FER1L4A9Z1Z3 1794 aa19.79■□□□□ 0.76
PCYT1A-213ENST00000460827 MAGI2Q86UL8 1455 aa19.79■□□□□ 0.76
PCYT1A-213ENST00000460827 HECW1Q76N89 1606 aa19.77■□□□□ 0.76
PCYT1A-213ENST00000460827 RANGAP1P46060 587 aaPredicted RBP19.75■□□□□ 0.75
PCYT1A-213ENST00000460827 MLECQ14165 292 aa19.74■□□□□ 0.75
PCYT1A-213ENST00000460827 ARHGEF12Q9NZN5 1544 aa19.72■□□□□ 0.75
PCYT1A-213ENST00000460827 SCAPERQ9BY12 1400 aa19.71■□□□□ 0.75
PCYT1A-213ENST00000460827 PREX1Q8TCU6 1659 aa19.7■□□□□ 0.74
PCYT1A-213ENST00000460827 PLCH2O75038 1416 aa19.69■□□□□ 0.74
PCYT1A-213ENST00000460827 CDK13Q14004 1512 aaKnown RBP19.69■□□□□ 0.74
PCYT1A-213ENST00000460827 ATP10AO60312 1499 aa19.68■□□□□ 0.74
PCYT1A-213ENST00000460827 STRCQ7RTU9 1775 aa19.68■□□□□ 0.74
PCYT1A-213ENST00000460827 ILDR2Q71H61 639 aa19.66■□□□□ 0.74
PCYT1A-213ENST00000460827 SETD1BQ9UPS6 1966 aaKnown RBP19.66■□□□□ 0.74
PCYT1A-213ENST00000460827 C9orf84Q5VXU9 1444 aa19.66■□□□□ 0.74
PCYT1A-213ENST00000460827 CEBPAP49715 358 aaPredicted RBP19.65■□□□□ 0.74
PCYT1A-213ENST00000460827 EEA1Q15075 1411 aa19.64■□□□□ 0.73
PCYT1A-213ENST00000460827 DISP3Q9P2K9 1392 aa19.62■□□□□ 0.73
PCYT1A-213ENST00000460827 MYO5CQ9NQX4 1742 aa19.62■□□□□ 0.73
PCYT1A-213ENST00000460827 SOCS7O14512 581 aa19.59■□□□□ 0.73
PCYT1A-213ENST00000460827 EFCAB2Q5VUJ9 269 aa19.59■□□□□ 0.73
PCYT1A-213ENST00000460827 DMRT2Q9Y5R5 561 aa19.59■□□□□ 0.73
PCYT1A-213ENST00000460827 KDM5CP41229 1560 aa19.57■□□□□ 0.72
PCYT1A-213ENST00000460827 ZNF518AQ6AHZ1 1483 aa19.57■□□□□ 0.72
PCYT1A-213ENST00000460827 UHRF1BP1Q6BDS2 1440 aa19.57■□□□□ 0.72
PCYT1A-213ENST00000460827 KIF14Q15058 1648 aa19.56■□□□□ 0.72
PCYT1A-213ENST00000460827 AFAP1Q8N556 730 aa19.54■□□□□ 0.72
PCYT1A-213ENST00000460827 DIP2CQ9Y2E4 1556 aa19.53■□□□□ 0.72
PCYT1A-213ENST00000460827 C3P01024 1663 aa19.52■□□□□ 0.72
PCYT1A-213ENST00000460827 PTPRTO14522 1441 aa19.52■□□□□ 0.72
PCYT1A-213ENST00000460827 REREQ9P2R6 1566 aa19.52■□□□□ 0.71
PCYT1A-213ENST00000460827 ABCA6Q8N139 1617 aa19.5■□□□□ 0.71
PCYT1A-213ENST00000460827 ARHGAP5Q13017 1502 aa19.5■□□□□ 0.71
PCYT1A-213ENST00000460827 SPATA31D1Q6ZQQ2 1576 aa19.49■□□□□ 0.71
PCYT1A-213ENST00000460827 LTBP4Q8N2S1 1624 aa19.49■□□□□ 0.71
PCYT1A-213ENST00000460827 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
PCYT1A-213ENST00000460827 ATP1B4Q9UN42 357 aaPredicted RBP19.48■□□□□ 0.71
PCYT1A-213ENST00000460827 TROQ12816 1431 aaPredicted RBP19.48■□□□□ 0.71
PCYT1A-213ENST00000460827 CDK11AQ9UQ88 783 aaPredicted RBP19.47■□□□□ 0.71
PCYT1A-213ENST00000460827 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
PCYT1A-213ENST00000460827 MLH3Q9UHC1 1453 aa19.47■□□□□ 0.71
PCYT1A-213ENST00000460827 ARHGAP35Q9NRY4 1499 aa19.46■□□□□ 0.71
PCYT1A-213ENST00000460827 AGLP35573 1532 aa19.46■□□□□ 0.71
PCYT1A-213ENST00000460827 LRRIQ1Q96JM4 1722 aa19.45■□□□□ 0.7
PCYT1A-213ENST00000460827 TRAPPC8Q9Y2L5 1435 aa19.44■□□□□ 0.7
PCYT1A-213ENST00000460827 MYT1LQ9UL68 1186 aa19.43■□□□□ 0.7
PCYT1A-213ENST00000460827 NCOA1Q15788 1441 aa19.42■□□□□ 0.7
PCYT1A-213ENST00000460827 IQSEC2Q5JU85 1478 aa19.42■□□□□ 0.7
PCYT1A-213ENST00000460827 CLIP1P30622 1438 aa19.41■□□□□ 0.7
PCYT1A-213ENST00000460827 ABCC1P33527 1531 aa19.41■□□□□ 0.7
PCYT1A-213ENST00000460827 KIDINS220Q9ULH0 1771 aa19.4■□□□□ 0.7
PCYT1A-213ENST00000460827 PREX2Q70Z35 1606 aa19.4■□□□□ 0.7
PCYT1A-213ENST00000460827 ITSN2Q9NZM3 1697 aa19.39■□□□□ 0.69
PCYT1A-213ENST00000460827 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
PCYT1A-213ENST00000460827 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
PCYT1A-213ENST00000460827 ESF1Q9H501 851 aaKnown RBP19.37■□□□□ 0.69
PCYT1A-213ENST00000460827 EHMT2Q96KQ7 1210 aa19.36■□□□□ 0.69
PCYT1A-213ENST00000460827 CAMSAP1Q5T5Y3 1602 aa19.35■□□□□ 0.69
PCYT1A-213ENST00000460827 NPATQ14207 1427 aa19.34■□□□□ 0.69
PCYT1A-213ENST00000460827 MROH2AA6NES4 1674 aa19.33■□□□□ 0.69
PCYT1A-213ENST00000460827 CDC42BPAQ5VT25 1732 aa19.32■□□□□ 0.68
PCYT1A-213ENST00000460827 SAMD9LQ8IVG5 1584 aa19.3■□□□□ 0.68
PCYT1A-213ENST00000460827 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
PCYT1A-213ENST00000460827 ZMYM3Q14202 1370 aa19.29■□□□□ 0.68
PCYT1A-213ENST00000460827 NCKAP5LQ9HCH0 1330 aa19.28■□□□□ 0.68
PCYT1A-213ENST00000460827 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.67
PCYT1A-213ENST00000460827 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
PCYT1A-213ENST00000460827 CASKIN1Q8WXD9 1431 aa19.25■□□□□ 0.67
PCYT1A-213ENST00000460827 SUPT6HQ7KZ85 1726 aaKnown RBP19.25■□□□□ 0.67
PCYT1A-213ENST00000460827 UBAP1LF5GYI3 381 aa19.25■□□□□ 0.67
PCYT1A-213ENST00000460827 PLA2R1Q13018 1463 aa19.24■□□□□ 0.67
PCYT1A-213ENST00000460827 MYO3AQ8NEV4 1616 aa19.24■□□□□ 0.67
PCYT1A-213ENST00000460827 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
PCYT1A-213ENST00000460827 TCOF1Q13428 1488 aaKnown RBP19.23■□□□□ 0.67
PCYT1A-213ENST00000460827 SYCP2Q9BX26 1530 aa19.23■□□□□ 0.67
PCYT1A-213ENST00000460827 PLXNC1O60486 1568 aa19.22■□□□□ 0.67
PCYT1A-213ENST00000460827 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
PCYT1A-213ENST00000460827 PKD2Q13563 968 aa19.21■□□□□ 0.67
PCYT1A-213ENST00000460827 PTPRKQ15262 1439 aa19.21■□□□□ 0.67
PCYT1A-213ENST00000460827 CEP170BQ9Y4F5 1589 aaPredicted RBP19.21■□□□□ 0.67
PCYT1A-213ENST00000460827 ZNF777Q9ULD5 760 aaPredicted RBP19.2■□□□□ 0.66
PCYT1A-213ENST00000460827 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
PCYT1A-213ENST00000460827 GPATCH8Q9UKJ3 1502 aaKnown RBP19.2■□□□□ 0.66
PCYT1A-213ENST00000460827 HNRNPMP52272 730 aaKnown RBP eCLIP19.19■□□□□ 0.66
PCYT1A-213ENST00000460827 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
PCYT1A-213ENST00000460827 A2MP01023 1474 aa19.16■□□□□ 0.66
PCYT1A-213ENST00000460827 KIAA1107Q9UPP5 1409 aa19.16■□□□□ 0.66
PCYT1A-213ENST00000460827 FYCO1Q9BQS8 1478 aa19.15■□□□□ 0.66
PCYT1A-213ENST00000460827 GGT6Q6P531 493 aa19.12■□□□□ 0.65
PCYT1A-213ENST00000460827 DNMT1P26358 1616 aaKnown RBP19.11■□□□□ 0.65
PCYT1A-213ENST00000460827 PLEKHH2Q8IVE3 1493 aa19.11■□□□□ 0.65
PCYT1A-213ENST00000460827 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
PCYT1A-213ENST00000460827 HSPA1LP34931 641 aa19.1■□□□□ 0.65
PCYT1A-213ENST00000460827 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
PCYT1A-213ENST00000460827 MED1Q15648 1581 aaPredicted RBP19.1■□□□□ 0.65
PCYT1A-213ENST00000460827 CFDP1Q9UEE9 299 aaPredicted RBP19.09■□□□□ 0.65
PCYT1A-213ENST00000460827 NEURL4Q96JN8 1562 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms