RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 NLRP6P59044 892 aa9.68□□□□□ -0.86
RFC4-211ENST00000460408 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
RFC4-211ENST00000460408 TAOK2Q9UL54 1235 aa9.68□□□□□ -0.86
RFC4-211ENST00000460408 VARS2Q5ST30 1063 aaKnown RBP9.67□□□□□ -0.86
RFC4-211ENST00000460408 FBXO22Q8NEZ5 403 aa9.67□□□□□ -0.86
RFC4-211ENST00000460408 BCL11BQ9C0K0 894 aaPredicted RBP9.66□□□□□ -0.86
RFC4-211ENST00000460408 ZNF687Q8N1G0 1237 aa9.63□□□□□ -0.87
RFC4-211ENST00000460408 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
RFC4-211ENST00000460408 STK24Q9Y6E0 443 aa9.62□□□□□ -0.87
RFC4-211ENST00000460408 ARSIQ5FYB1 569 aa9.59□□□□□ -0.87
RFC4-211ENST00000460408 STK25O00506 426 aa9.58□□□□□ -0.88
RFC4-211ENST00000460408 KIF3CO14782 793 aa9.57□□□□□ -0.88
RFC4-211ENST00000460408 ECM2O94769 699 aaPredicted RBP9.57□□□□□ -0.88
RFC4-211ENST00000460408 RNF166Q96A37 237 aaPredicted RBP9.56□□□□□ -0.88
RFC4-211ENST00000460408 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
RFC4-211ENST00000460408 KHSRPQ92945 711 aaKnown RBP eCLIP9.54□□□□□ -0.882e-6■■■□□ 14.6
RFC4-211ENST00000460408 MYT1LQ9UL68 1186 aa9.54□□□□□ -0.88
RFC4-211ENST00000460408 C2orf72A6NCS6 295 aa9.53□□□□□ -0.88
RFC4-211ENST00000460408 PKD2Q13563 968 aa9.53□□□□□ -0.88
RFC4-211ENST00000460408 RGL2O15211 777 aa9.51□□□□□ -0.89
RFC4-211ENST00000460408 PTGER2P43116 358 aa9.51□□□□□ -0.89
RFC4-211ENST00000460408 SLC34A2O95436 690 aa9.49□□□□□ -0.89
RFC4-211ENST00000460408 NUDT7P0C024 238 aa9.46□□□□□ -0.9
RFC4-211ENST00000460408 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
RFC4-211ENST00000460408 LSM11P83369 360 aaKnown RBP eCLIP9.45□□□□□ -0.9
RFC4-211ENST00000460408 TMC2Q8TDI7 906 aa9.45□□□□□ -0.9
RFC4-211ENST00000460408 PCDHGA4Q9Y5G9 962 aa9.45□□□□□ -0.9
RFC4-211ENST00000460408 PBX2P40425 430 aa9.44□□□□□ -0.9
RFC4-211ENST00000460408 LHX6Q9UPM6 363 aa9.43□□□□□ -0.9
RFC4-211ENST00000460408 PPP1R37O75864 691 aa9.42□□□□□ -0.9
RFC4-211ENST00000460408 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
RFC4-211ENST00000460408 KDM4FA0A1W2PPD8 638 aa9.36□□□□□ -0.91
RFC4-211ENST00000460408 PTCD2Q8WV60 388 aaKnown RBP9.36□□□□□ -0.91
RFC4-211ENST00000460408 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
RFC4-211ENST00000460408 PSDA5PKW4 1024 aaPredicted RBP9.35□□□□□ -0.91
RFC4-211ENST00000460408 FOXK1P85037 733 aa9.34□□□□□ -0.91
RFC4-211ENST00000460408 HS6ST3Q8IZP7 471 aa9.34□□□□□ -0.91
RFC4-211ENST00000460408 ARHGAP33O14559 1287 aa9.32□□□□□ -0.92
RFC4-211ENST00000460408 RTN4Q9NQC3 1192 aaKnown RBP9.32□□□□□ -0.92
RFC4-211ENST00000460408 AMER1Q5JTC6 1135 aaPredicted RBP9.31□□□□□ -0.92
RFC4-211ENST00000460408 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
RFC4-211ENST00000460408 GPHNQ9NQX3 736 aaPredicted RBP9.31□□□□□ -0.92
RFC4-211ENST00000460408 ADGRD1Q6QNK2 874 aa9.29□□□□□ -0.92
RFC4-211ENST00000460408 TK2O00142 265 aa9.27□□□□□ -0.93
RFC4-211ENST00000460408 DSG2Q14126 1118 aa9.27□□□□□ -0.93
RFC4-211ENST00000460408 DNAJC5Q9H3Z4 198 aa9.26□□□□□ -0.93
RFC4-211ENST00000460408 TBC1D12O60347 775 aa9.25□□□□□ -0.93
RFC4-211ENST00000460408 HCSTQ9UBK5 93 aa9.25□□□□□ -0.93
RFC4-211ENST00000460408 HRO43593 1189 aa9.24□□□□□ -0.93
RFC4-211ENST00000460408 PPP4R3BQ5MIZ7 849 aa9.24□□□□□ -0.93
RFC4-211ENST00000460408 DMRTA1Q5VZB9 504 aa9.24□□□□□ -0.93
RFC4-211ENST00000460408 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
RFC4-211ENST00000460408 PSEN2P49810 448 aa9.23□□□□□ -0.93
RFC4-211ENST00000460408 PLA2G2EQ9NZK7 142 aa9.21□□□□□ -0.94
RFC4-211ENST00000460408 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
RFC4-211ENST00000460408 OXER1Q8TDS5 423 aa9.19□□□□□ -0.94
RFC4-211ENST00000460408 RYDENQ9NUL5 291 aaKnown RBP9.19□□□□□ -0.94
RFC4-211ENST00000460408 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
RFC4-211ENST00000460408 KCNK17Q96T54 332 aa9.15□□□□□ -0.94
RFC4-211ENST00000460408 KCNH8Q96L42 1107 aa9.14□□□□□ -0.95
RFC4-211ENST00000460408 PPP1R15BQ5SWA1 713 aa9.13□□□□□ -0.95
RFC4-211ENST00000460408 UPF1Q92900 1129 aaKnown RBP eCLIP9.13□□□□□ -0.95
RFC4-211ENST00000460408 KCTD12Q96CX2 325 aaKnown RBP9.12□□□□□ -0.95
RFC4-211ENST00000460408 STAC3Q96MF2 364 aa9.12□□□□□ -0.95
RFC4-211ENST00000460408 SLC4A5Q9BY07 1137 aa9.12□□□□□ -0.95
RFC4-211ENST00000460408 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
RFC4-211ENST00000460408 VPS9D1Q9Y2B5 631 aa9.12□□□□□ -0.95
RFC4-211ENST00000460408 ZNF454Q8N9F8 522 aa9.11□□□□□ -0.95
RFC4-211ENST00000460408 NCKAP5LQ9HCH0 1330 aa9.1□□□□□ -0.95
RFC4-211ENST00000460408 PDE4AP27815 886 aa9.1□□□□□ -0.95
RFC4-211ENST00000460408 FOSBP53539 338 aa9.1□□□□□ -0.95
RFC4-211ENST00000460408 ANO8Q9HCE9 1232 aaPredicted RBP9.1□□□□□ -0.95
RFC4-211ENST00000460408 BHMG1C9JSJ3 638 aaPredicted RBP9.06□□□□□ -0.96
RFC4-211ENST00000460408 JPH4Q96JJ6 628 aa9.06□□□□□ -0.96
RFC4-211ENST00000460408 GTPBP6O43824 516 aaPredicted RBP9.05□□□□□ -0.96
RFC4-211ENST00000460408 PTPREP23469 700 aa9.05□□□□□ -0.96
RFC4-211ENST00000460408 EVI5O60447 810 aa9.04□□□□□ -0.96
RFC4-211ENST00000460408 ZBED2Q9BTP6 218 aa9.04□□□□□ -0.96
RFC4-211ENST00000460408 PTPN5P54829 565 aa9.02□□□□□ -0.97
RFC4-211ENST00000460408 MFSD10Q14728 455 aa9.02□□□□□ -0.97
RFC4-211ENST00000460408 ZDHHC16Q969W1 377 aa9.02□□□□□ -0.97
RFC4-211ENST00000460408 DDX27Q96GQ7 796 aaKnown RBP9.02□□□□□ -0.97
RFC4-211ENST00000460408 LARP6Q9BRS8 491 aaKnown RBP9.02□□□□□ -0.97
RFC4-211ENST00000460408 IFFO2Q5TF58 517 aa9.01□□□□□ -0.97
RFC4-211ENST00000460408 THSD4Q6ZMP0 1018 aa9.01□□□□□ -0.97
RFC4-211ENST00000460408 ADAM33Q9BZ11 813 aa9.01□□□□□ -0.97
RFC4-211ENST00000460408 MAP3K9P80192 1104 aa8.99□□□□□ -0.97
RFC4-211ENST00000460408 MRPL50Q8N5N7 158 aaKnown RBP8.98□□□□□ -0.97
RFC4-211ENST00000460408 GOLGA8CPA6NN73 597 aa8.97□□□□□ -0.97
RFC4-211ENST00000460408 WNT2BQ93097 391 aa8.97□□□□□ -0.97
RFC4-211ENST00000460408 EMILIN3Q9NT22 766 aa8.97□□□□□ -0.97
RFC4-211ENST00000460408 NBPF3Q9H094 633 aa8.96□□□□□ -0.98
RFC4-211ENST00000460408 RGS20O76081 388 aa8.95□□□□□ -0.98
RFC4-211ENST00000460408 PCDHGA10Q9Y5H3 936 aa8.95□□□□□ -0.98
RFC4-211ENST00000460408 PPP1R3GB7ZBB8 358 aa8.94□□□□□ -0.98
RFC4-211ENST00000460408 RABGEF1Q9UJ41 708 aa8.92□□□□□ -0.98
RFC4-211ENST00000460408 FBXW7Q969H0 707 aa8.91□□□□□ -0.98
RFC4-211ENST00000460408 A0A0G2JS52 829 aa8.9□□□□□ -0.98
RFC4-211ENST00000460408 PHF14O94880 888 aa8.9□□□□□ -0.98
RFC4-211ENST00000460408 COL9A1P20849 921 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms