RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
CDKN3-205ENST00000458126 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
CDKN3-205ENST00000458126 PCDHB8Q9UN66 801 aa11.1□□□□□ -0.63
CDKN3-205ENST00000458126 FANCD2Q9BXW9 1451 aa11.09□□□□□ -0.63
CDKN3-205ENST00000458126 MAMSTRQ6ZN01 415 aa11.09□□□□□ -0.63
CDKN3-205ENST00000458126 DCAF1Q9Y4B6 1507 aa11.09□□□□□ -0.63
CDKN3-205ENST00000458126 SRCAPQ6ZRS2 3230 aa11.08□□□□□ -0.64
CDKN3-205ENST00000458126 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
CDKN3-205ENST00000458126 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
CDKN3-205ENST00000458126 SEC24BO95487 1268 aa11.06□□□□□ -0.64
CDKN3-205ENST00000458126 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
CDKN3-205ENST00000458126 PCF11O94913 1555 aaKnown RBP11.04□□□□□ -0.64
CDKN3-205ENST00000458126 DIP2BQ9P265 1576 aa11.03□□□□□ -0.64
CDKN3-205ENST00000458126 COLQQ9Y215 455 aaPredicted RBP11.03□□□□□ -0.64
CDKN3-205ENST00000458126 SNAPC4Q5SXM2 1469 aa11.02□□□□□ -0.65
CDKN3-205ENST00000458126 SYNJ1O43426 1573 aa11.02□□□□□ -0.65
CDKN3-205ENST00000458126 MED1Q15648 1581 aaPredicted RBP11□□□□□ -0.65
CDKN3-205ENST00000458126 SCUBE2Q9NQ36 999 aa11□□□□□ -0.65
CDKN3-205ENST00000458126 PSEN1P49768 467 aa10.98□□□□□ -0.65
CDKN3-205ENST00000458126 IRX5P78411 483 aaPredicted RBP10.98□□□□□ -0.65
CDKN3-205ENST00000458126 PLCG2P16885 1265 aa10.97□□□□□ -0.65
CDKN3-205ENST00000458126 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
CDKN3-205ENST00000458126 OCEL1Q9H607 264 aa10.96□□□□□ -0.65
CDKN3-205ENST00000458126 TSPOAP1O95153 1857 aa10.93□□□□□ -0.66
CDKN3-205ENST00000458126 AQRO60306 1485 aaKnown RBP eCLIP10.93□□□□□ -0.66
CDKN3-205ENST00000458126 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
CDKN3-205ENST00000458126 MAPKBP1O60336 1514 aa10.92□□□□□ -0.66
CDKN3-205ENST00000458126 MKRN3Q13064 507 aaKnown RBP10.91□□□□□ -0.66
CDKN3-205ENST00000458126 PTPRMP28827 1452 aa10.87□□□□□ -0.67
CDKN3-205ENST00000458126 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
CDKN3-205ENST00000458126 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
CDKN3-205ENST00000458126 COL17A1Q9UMD9 1497 aaPredicted RBP10.84□□□□□ -0.67
CDKN3-205ENST00000458126 RIOK3O14730 519 aaKnown RBP10.83□□□□□ -0.68
CDKN3-205ENST00000458126 HSPA2P54652 639 aa10.83□□□□□ -0.68
CDKN3-205ENST00000458126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.83□□□□□ -0.68
CDKN3-205ENST00000458126 IQSEC2Q5JU85 1478 aa10.82□□□□□ -0.68
CDKN3-205ENST00000458126 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
CDKN3-205ENST00000458126 ZCCHC6Q5VYS8 1495 aaKnown RBP10.81□□□□□ -0.68
CDKN3-205ENST00000458126 CHMP7Q8WUX9 453 aaPredicted RBP10.81□□□□□ -0.68
CDKN3-205ENST00000458126 L3MBTL3Q96JM7 780 aaPredicted RBP10.81□□□□□ -0.68
CDKN3-205ENST00000458126 VGFO15240 615 aaPredicted RBP10.79□□□□□ -0.68
CDKN3-205ENST00000458126 RNF25Q96BH1 459 aaPredicted RBP10.79□□□□□ -0.68
CDKN3-205ENST00000458126 SLAIN1Q8ND83 568 aa10.78□□□□□ -0.68
CDKN3-205ENST00000458126 TAOK2Q9UL54 1235 aa10.77□□□□□ -0.69
CDKN3-205ENST00000458126 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.76□□□□□ -0.69
CDKN3-205ENST00000458126 LTBP4Q8N2S1 1624 aa10.76□□□□□ -0.69
CDKN3-205ENST00000458126 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
CDKN3-205ENST00000458126 CFTRP13569 1480 aa10.74□□□□□ -0.69
CDKN3-205ENST00000458126 FAM163AQ96GL9 167 aaPredicted RBP10.74□□□□□ -0.69
CDKN3-205ENST00000458126 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.73□□□□□ -0.69
CDKN3-205ENST00000458126 ZFP91Q96JP5 570 aaPredicted RBP10.73□□□□□ -0.69
CDKN3-205ENST00000458126 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
CDKN3-205ENST00000458126 POTEMA6NI47 508 aa10.71□□□□□ -0.69
CDKN3-205ENST00000458126 ECM2O94769 699 aaPredicted RBP10.71□□□□□ -0.69
CDKN3-205ENST00000458126 EFCAB3Q8N7B9 438 aa10.71□□□□□ -0.69
CDKN3-205ENST00000458126 ADAMTSL3P82987 1691 aa10.7□□□□□ -0.7
CDKN3-205ENST00000458126 SOX12O15370 315 aa10.7□□□□□ -0.7
CDKN3-205ENST00000458126 PKD2Q13563 968 aa10.7□□□□□ -0.7
CDKN3-205ENST00000458126 POTEGQ6S5H5 508 aa10.7□□□□□ -0.7
CDKN3-205ENST00000458126 C3orf67Q6ZVT6 689 aa10.7□□□□□ -0.7
CDKN3-205ENST00000458126 MAGI1Q96QZ7 1491 aaPredicted RBP10.69□□□□□ -0.7
CDKN3-205ENST00000458126 LCE2DQ5TA82 110 aaPredicted RBP10.69□□□□□ -0.7
CDKN3-205ENST00000458126 DPY19L2Q6NUT2 758 aa10.68□□□□□ -0.7
CDKN3-205ENST00000458126 BOLA1Q9Y3E2 137 aa10.68□□□□□ -0.7
CDKN3-205ENST00000458126 CEP170Q5SW79 1584 aa10.68□□□□□ -0.7
CDKN3-205ENST00000458126 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
CDKN3-205ENST00000458126 PTPRTO14522 1441 aa10.67□□□□□ -0.7
CDKN3-205ENST00000458126 G3V3G9 751 aa10.66□□□□□ -0.7
CDKN3-205ENST00000458126 SNPHO15079 494 aa10.66□□□□□ -0.7
CDKN3-205ENST00000458126 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
CDKN3-205ENST00000458126 SLC34A2O95436 690 aa10.63□□□□□ -0.71
CDKN3-205ENST00000458126 TMEM121BQ9BXQ6 578 aaPredicted RBP10.63□□□□□ -0.71
CDKN3-205ENST00000458126 RGS17Q9UGC6 210 aaPredicted RBP10.63□□□□□ -0.71
CDKN3-205ENST00000458126 KIF21BO75037 1637 aa10.62□□□□□ -0.71
CDKN3-205ENST00000458126 HSPA1LP34931 641 aa10.62□□□□□ -0.71
CDKN3-205ENST00000458126 BCL11BQ9C0K0 894 aaPredicted RBP10.62□□□□□ -0.71
CDKN3-205ENST00000458126 UBAP1LF5GYI3 381 aa10.61□□□□□ -0.71
CDKN3-205ENST00000458126 YEATS2Q9ULM3 1422 aa10.6□□□□□ -0.71
CDKN3-205ENST00000458126 RGL2O15211 777 aa10.6□□□□□ -0.71
CDKN3-205ENST00000458126 ST18O60284 1047 aa10.59□□□□□ -0.71
CDKN3-205ENST00000458126 STK24Q9Y6E0 443 aa10.59□□□□□ -0.71
CDKN3-205ENST00000458126 MROH2BQ7Z745 1585 aa10.58□□□□□ -0.72
CDKN3-205ENST00000458126 STK25O00506 426 aa10.58□□□□□ -0.72
CDKN3-205ENST00000458126 GLI2P10070 1586 aa10.57□□□□□ -0.72
CDKN3-205ENST00000458126 NLRP6P59044 892 aa10.57□□□□□ -0.72
CDKN3-205ENST00000458126 MS4A4AQ96JQ5 239 aa10.57□□□□□ -0.72
CDKN3-205ENST00000458126 PHF8Q9UPP1 1060 aa10.57□□□□□ -0.72
CDKN3-205ENST00000458126 SHROOM2Q13796 1616 aa10.57□□□□□ -0.72
CDKN3-205ENST00000458126 TDRD9Q8NDG6 1382 aaKnown RBP10.56□□□□□ -0.72
CDKN3-205ENST00000458126 ADCY10Q96PN6 1610 aa10.55□□□□□ -0.72
CDKN3-205ENST00000458126 ABCC8Q09428 1581 aa10.55□□□□□ -0.72
CDKN3-205ENST00000458126 MICALL2Q8IY33 904 aa10.54□□□□□ -0.72
CDKN3-205ENST00000458126 UPF1Q92900 1129 aaKnown RBP eCLIP10.54□□□□□ -0.72
CDKN3-205ENST00000458126 TEX14Q8IWB6 1497 aa10.54□□□□□ -0.72
CDKN3-205ENST00000458126 FBXO22Q8NEZ5 403 aa10.53□□□□□ -0.72
CDKN3-205ENST00000458126 WDR97A6NE52 1622 aa10.53□□□□□ -0.72
CDKN3-205ENST00000458126 MADDQ8WXG6 1647 aa10.53□□□□□ -0.72
CDKN3-205ENST00000458126 STRCQ7RTU9 1775 aa10.52□□□□□ -0.72
CDKN3-205ENST00000458126 SETD1AO15047 1707 aaKnown RBP10.5□□□□□ -0.73
CDKN3-205ENST00000458126 MFRPQ9BY79 579 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms