RNA–Protein interactions for RNA: ENST00000457888.2

UBDP1-202, Transcript of ubiquitin D pseudogene 1, humanhuman

BASIC

Gene UBDP1, Length 382 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBDP1-202ENST00000457888 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
UBDP1-202ENST00000457888 GPR153Q6NV75 609 aa11.34□□□□□ -0.59
UBDP1-202ENST00000457888 ZNF687Q8N1G0 1237 aa11.32□□□□□ -0.6
UBDP1-202ENST00000457888 RNF166Q96A37 237 aaPredicted RBP11.32□□□□□ -0.6
UBDP1-202ENST00000457888 NLRP6P59044 892 aa11.29□□□□□ -0.6
UBDP1-202ENST00000457888 MYT1LQ9UL68 1186 aa11.28□□□□□ -0.6
UBDP1-202ENST00000457888 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
UBDP1-202ENST00000457888 BCL11BQ9C0K0 894 aaPredicted RBP11.26□□□□□ -0.61
UBDP1-202ENST00000457888 TAOK2Q9UL54 1235 aa11.26□□□□□ -0.61
UBDP1-202ENST00000457888 FBXO22Q8NEZ5 403 aa11.25□□□□□ -0.61
UBDP1-202ENST00000457888 STK24Q9Y6E0 443 aa11.22□□□□□ -0.61
UBDP1-202ENST00000457888 ZNF316A6NFI3 1004 aaPredicted RBP11.21□□□□□ -0.61
UBDP1-202ENST00000457888 PTGER2P43116 358 aa11.21□□□□□ -0.61
UBDP1-202ENST00000457888 KHSRPQ92945 711 aaKnown RBP eCLIP11.2□□□□□ -0.62
UBDP1-202ENST00000457888 MFRPQ9BY79 579 aa11.19□□□□□ -0.62
UBDP1-202ENST00000457888 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
UBDP1-202ENST00000457888 STK25O00506 426 aa11.16□□□□□ -0.62
UBDP1-202ENST00000457888 C2orf72A6NCS6 295 aa11.15□□□□□ -0.62
UBDP1-202ENST00000457888 KIF3CO14782 793 aa11.15□□□□□ -0.62
UBDP1-202ENST00000457888 LSM11P83369 360 aaKnown RBP eCLIP11.13□□□□□ -0.63
UBDP1-202ENST00000457888 ECM2O94769 699 aaPredicted RBP11.11□□□□□ -0.63
UBDP1-202ENST00000457888 NUDT7P0C024 238 aa11.11□□□□□ -0.63
UBDP1-202ENST00000457888 PBX2P40425 430 aa11.08□□□□□ -0.64
UBDP1-202ENST00000457888 SLC34A2O95436 690 aa11.07□□□□□ -0.64
UBDP1-202ENST00000457888 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
UBDP1-202ENST00000457888 TMC2Q8TDI7 906 aa11.06□□□□□ -0.64
UBDP1-202ENST00000457888 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
UBDP1-202ENST00000457888 RGL2O15211 777 aa11.02□□□□□ -0.65
UBDP1-202ENST00000457888 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
UBDP1-202ENST00000457888 AXIN2Q9Y2T1 843 aa11.02□□□□□ -0.65
UBDP1-202ENST00000457888 PKD2Q13563 968 aa10.99□□□□□ -0.65
UBDP1-202ENST00000457888 PPP1R37O75864 691 aa10.97□□□□□ -0.65
UBDP1-202ENST00000457888 PSDA5PKW4 1024 aaPredicted RBP10.95□□□□□ -0.66
UBDP1-202ENST00000457888 ARHGAP33O14559 1287 aa10.94□□□□□ -0.66
UBDP1-202ENST00000457888 ADGRD1Q6QNK2 874 aa10.93□□□□□ -0.66
UBDP1-202ENST00000457888 HCSTQ9UBK5 93 aa10.92□□□□□ -0.66
UBDP1-202ENST00000457888 KDM4FA0A1W2PPD8 638 aa10.91□□□□□ -0.66
UBDP1-202ENST00000457888 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
UBDP1-202ENST00000457888 PLA2G2EQ9NZK7 142 aa10.9□□□□□ -0.66
UBDP1-202ENST00000457888 FOXK1P85037 733 aa10.88□□□□□ -0.67
UBDP1-202ENST00000457888 TK2O00142 265 aa10.87□□□□□ -0.67
UBDP1-202ENST00000457888 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
UBDP1-202ENST00000457888 PSEN2P49810 448 aa10.85□□□□□ -0.67
UBDP1-202ENST00000457888 DMRTA1Q5VZB9 504 aa10.85□□□□□ -0.67
UBDP1-202ENST00000457888 GPHNQ9NQX3 736 aaPredicted RBP10.85□□□□□ -0.67
UBDP1-202ENST00000457888 PPP4R3BQ5MIZ7 849 aa10.84□□□□□ -0.67
UBDP1-202ENST00000457888 HRO43593 1189 aa10.83□□□□□ -0.68
UBDP1-202ENST00000457888 TBC1D12O60347 775 aa10.83□□□□□ -0.68
UBDP1-202ENST00000457888 DSG2Q14126 1118 aa10.82□□□□□ -0.68
UBDP1-202ENST00000457888 HS6ST3Q8IZP7 471 aa10.81□□□□□ -0.68
UBDP1-202ENST00000457888 KCTD12Q96CX2 325 aaKnown RBP10.77□□□□□ -0.69
UBDP1-202ENST00000457888 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
UBDP1-202ENST00000457888 KCNH8Q96L42 1107 aa10.76□□□□□ -0.69
UBDP1-202ENST00000457888 KCNK17Q96T54 332 aa10.76□□□□□ -0.69
UBDP1-202ENST00000457888 OXER1Q8TDS5 423 aa10.72□□□□□ -0.69
UBDP1-202ENST00000457888 CHGAP10645 457 aaKnown RBP10.7□□□□□ -0.7
UBDP1-202ENST00000457888 UPF1Q92900 1129 aaKnown RBP eCLIP10.7□□□□□ -0.7
UBDP1-202ENST00000457888 VPS9D1Q9Y2B5 631 aa10.7□□□□□ -0.7
UBDP1-202ENST00000457888 ZNF454Q8N9F8 522 aa10.68□□□□□ -0.7
UBDP1-202ENST00000457888 CRISPLD2Q9H0B8 497 aa10.66□□□□□ -0.7
UBDP1-202ENST00000457888 BCL2L12Q9HB09 334 aa10.66□□□□□ -0.7
UBDP1-202ENST00000457888 PTPN5P54829 565 aa10.65□□□□□ -0.7
UBDP1-202ENST00000457888 NKX1-1Q15270 411 aaPredicted RBP10.65□□□□□ -0.7
UBDP1-202ENST00000457888 SLC4A5Q9BY07 1137 aa10.65□□□□□ -0.7
UBDP1-202ENST00000457888 DNAJC5Q9H3Z4 198 aa10.65□□□□□ -0.7
UBDP1-202ENST00000457888 RYDENQ9NUL5 291 aaKnown RBP10.65□□□□□ -0.7
UBDP1-202ENST00000457888 PPP1R15BQ5SWA1 713 aa10.64□□□□□ -0.71
UBDP1-202ENST00000457888 FOSBP53539 338 aa10.63□□□□□ -0.71
UBDP1-202ENST00000457888 PTPREP23469 700 aa10.61□□□□□ -0.71
UBDP1-202ENST00000457888 BHMG1C9JSJ3 638 aaPredicted RBP10.59□□□□□ -0.71
UBDP1-202ENST00000457888 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
UBDP1-202ENST00000457888 GOLGA8CPA6NN73 597 aa10.58□□□□□ -0.72
UBDP1-202ENST00000457888 THSD4Q6ZMP0 1018 aa10.58□□□□□ -0.72
UBDP1-202ENST00000457888 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
UBDP1-202ENST00000457888 NCKAP5LQ9HCH0 1330 aa10.58□□□□□ -0.72
UBDP1-202ENST00000457888 PDE4AP27815 886 aa10.57□□□□□ -0.72
UBDP1-202ENST00000457888 IFFO2Q5TF58 517 aa10.57□□□□□ -0.72
UBDP1-202ENST00000457888 JPH4Q96JJ6 628 aa10.57□□□□□ -0.72
UBDP1-202ENST00000457888 EVI5O60447 810 aa10.56□□□□□ -0.72
UBDP1-202ENST00000457888 MRPL50Q8N5N7 158 aaKnown RBP10.56□□□□□ -0.72
UBDP1-202ENST00000457888 RGS20O76081 388 aa10.55□□□□□ -0.72
UBDP1-202ENST00000457888 WNT2BQ93097 391 aa10.55□□□□□ -0.72
UBDP1-202ENST00000457888 ZDHHC16Q969W1 377 aa10.55□□□□□ -0.72
UBDP1-202ENST00000457888 ADAM33Q9BZ11 813 aa10.54□□□□□ -0.72
UBDP1-202ENST00000457888 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
UBDP1-202ENST00000457888 A0A0G2JS52 829 aa10.5□□□□□ -0.73
UBDP1-202ENST00000457888 DDX27Q96GQ7 796 aaKnown RBP10.5□□□□□ -0.73
UBDP1-202ENST00000457888 LARP6Q9BRS8 491 aaKnown RBP10.5□□□□□ -0.73
UBDP1-202ENST00000457888 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
UBDP1-202ENST00000457888 GTPBP6O43824 516 aaPredicted RBP10.46□□□□□ -0.73
UBDP1-202ENST00000457888 PPP1R3GB7ZBB8 358 aa10.45□□□□□ -0.74
UBDP1-202ENST00000457888 MFSD10Q14728 455 aa10.45□□□□□ -0.74
UBDP1-202ENST00000457888 IRX2Q9BZI1 471 aaPredicted RBP10.45□□□□□ -0.74
UBDP1-202ENST00000457888 RABGEF1Q9UJ41 708 aa10.44□□□□□ -0.74
UBDP1-202ENST00000457888 PCDHGA10Q9Y5H3 936 aa10.44□□□□□ -0.74
UBDP1-202ENST00000457888 EMILIN3Q9NT22 766 aa10.43□□□□□ -0.74
UBDP1-202ENST00000457888 ANKK1Q8NFD2 765 aa10.42□□□□□ -0.74
UBDP1-202ENST00000457888 PROX2Q3B8N5 592 aa10.41□□□□□ -0.74
UBDP1-202ENST00000457888 COL9A1P20849 921 aa10.4□□□□□ -0.74
UBDP1-202ENST00000457888 FBXW7Q969H0 707 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms