RNA–Protein interactions for RNA: ENST00000456459.1

PCDH9-AS4-201, PCDH9 antisense RNA 4, humanhuman

TSL 3 BASIC

Gene PCDH9-AS4, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS4-201ENST00000456459 KIF3CO14782 793 aa13.63□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 ZNF710Q8N1W2 664 aa13.63□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 C2orf72A6NCS6 295 aa13.62□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 AMER1Q5JTC6 1135 aaPredicted RBP13.61□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 EMP3P54852 163 aa13.6□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 CDAN1Q8IWY9 1227 aa13.59□□□□□ -0.23
PCDH9-AS4-201ENST00000456459 HOXB1P14653 301 aaPredicted RBP13.58□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 RIMBP2O15034 1052 aa13.57□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 RYDENQ9NUL5 291 aaKnown RBP13.57□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 TMC2Q8TDI7 906 aa13.56□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 GTPBP6O43824 516 aaPredicted RBP13.55□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 POTEB3A0JP26 581 aa13.53□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 POTEBQ6S5H4 581 aa13.53□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
PCDH9-AS4-201ENST00000456459 PLSCR2Q9NRY7 297 aa13.52□□□□□ -0.25
PCDH9-AS4-201ENST00000456459 GPR153Q6NV75 609 aa13.51□□□□□ -0.25
PCDH9-AS4-201ENST00000456459 HS3ST6Q96QI5 342 aa13.5□□□□□ -0.25
PCDH9-AS4-201ENST00000456459 ARSIQ5FYB1 569 aa13.47□□□□□ -0.25
PCDH9-AS4-201ENST00000456459 GPHNQ9NQX3 736 aaPredicted RBP13.46□□□□□ -0.25
PCDH9-AS4-201ENST00000456459 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
PCDH9-AS4-201ENST00000456459 ERBB3P21860 1342 aa13.43□□□□□ -0.26
PCDH9-AS4-201ENST00000456459 FOXK1P85037 733 aa13.43□□□□□ -0.26
PCDH9-AS4-201ENST00000456459 SLC34A2O95436 690 aa13.42□□□□□ -0.26
PCDH9-AS4-201ENST00000456459 DSG2Q14126 1118 aa13.41□□□□□ -0.26
PCDH9-AS4-201ENST00000456459 PLPP6Q8IY26 295 aa13.4□□□□□ -0.26
PCDH9-AS4-201ENST00000456459 BBXQ8WY36 941 aaPredicted RBP13.39□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 CRISPLD2Q9H0B8 497 aa13.39□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 VARS2Q5ST30 1063 aaKnown RBP13.38□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 PCDHGA4Q9Y5G9 962 aa13.38□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 KRTAP3-3Q9BYR6 98 aa13.36□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 KRTAP3-2Q9BYR7 98 aa13.36□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 NUDT7P0C024 238 aa13.35□□□□□ -0.27
PCDH9-AS4-201ENST00000456459 ZNF316A6NFI3 1004 aaPredicted RBP13.32□□□□□ -0.28
PCDH9-AS4-201ENST00000456459 PTCD2Q8WV60 388 aaKnown RBP13.32□□□□□ -0.28
PCDH9-AS4-201ENST00000456459 PDE4AP27815 886 aa13.31□□□□□ -0.28
PCDH9-AS4-201ENST00000456459 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
PCDH9-AS4-201ENST00000456459 CADPS2Q86UW7 1296 aa13.29□□□□□ -0.28
PCDH9-AS4-201ENST00000456459 ZNF687Q8N1G0 1237 aa13.28□□□□□ -0.28
PCDH9-AS4-201ENST00000456459 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 LHX6Q9UPM6 363 aa13.27□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 SPNS2Q8IVW8 549 aa13.26□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 SPRYD3Q8NCJ5 442 aa13.23□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 OXER1Q8TDS5 423 aa13.22□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 TBC1D12O60347 775 aa13.21□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 MFSD10Q14728 455 aa13.21□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
PCDH9-AS4-201ENST00000456459 MMRN1Q13201 1228 aa13.17□□□□□ -0.3
PCDH9-AS4-201ENST00000456459 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
PCDH9-AS4-201ENST00000456459 CFAP44Q96MT7 982 aa13.16□□□□□ -0.3
PCDH9-AS4-201ENST00000456459 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
PCDH9-AS4-201ENST00000456459 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
PCDH9-AS4-201ENST00000456459 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
PCDH9-AS4-201ENST00000456459 AXIN2Q9Y2T1 843 aa13.1□□□□□ -0.31
PCDH9-AS4-201ENST00000456459 PBX2P40425 430 aa13.07□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 LSM11P83369 360 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 EVI5O60447 810 aa13.05□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 MAP3K9P80192 1104 aa13.05□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 PPP4R3BQ5MIZ7 849 aa13.05□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 CAMK2BQ13554 666 aa13.03□□□□□ -0.32
PCDH9-AS4-201ENST00000456459 ARHGAP33O14559 1287 aa13.02□□□□□ -0.33
PCDH9-AS4-201ENST00000456459 ZNF454Q8N9F8 522 aa13.01□□□□□ -0.33
PCDH9-AS4-201ENST00000456459 PSEN2P49810 448 aa12.99□□□□□ -0.33
PCDH9-AS4-201ENST00000456459 FOSBP53539 338 aa12.98□□□□□ -0.33
PCDH9-AS4-201ENST00000456459 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
PCDH9-AS4-201ENST00000456459 DPYSL4O14531 572 aa12.95□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 JPH4Q96JJ6 628 aa12.95□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 PTGER2P43116 358 aa12.93□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 KCNK17Q96T54 332 aa12.93□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 ADGRD1Q6QNK2 874 aa12.92□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 ZDHHC16Q969W1 377 aa12.9□□□□□ -0.34
PCDH9-AS4-201ENST00000456459 ADAM33Q9BZ11 813 aa12.89□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 WDR70Q9NW82 654 aa12.89□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 PCDHGA10Q9Y5H3 936 aa12.89□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 TK2O00142 265 aa12.88□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 E2F4Q16254 413 aa12.88□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 KCNH8Q96L42 1107 aa12.87□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 PTPREP23469 700 aa12.85□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 HRO43593 1189 aa12.84□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 PHF14O94880 888 aa12.84□□□□□ -0.35
PCDH9-AS4-201ENST00000456459 PDIA6Q15084 440 aa12.81□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 TYW1BQ6NUM6 668 aa12.81□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 VPS9D1Q9Y2B5 631 aa12.81□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 DDX12PQ92771 950 aa12.8□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 ARIH1Q9Y4X5 557 aaPredicted RBP12.8□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 SLC4A5Q9BY07 1137 aa12.78□□□□□ -0.36
PCDH9-AS4-201ENST00000456459 EPAS1Q99814 870 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms