RNA–Protein interactions for RNA: ENST00000456062.1

AC004872.1-201, humanhuman

TSL 3 BASIC

Gene AC004872.1, Length 469 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004872.1-201ENST00000456062 FBXO22Q8NEZ5 403 aa13.05□□□□□ -0.32
AC004872.1-201ENST00000456062 NLRP6P59044 892 aa13.04□□□□□ -0.32
AC004872.1-201ENST00000456062 BCL11BQ9C0K0 894 aaPredicted RBP13.04□□□□□ -0.32
AC004872.1-201ENST00000456062 ERBB3P21860 1342 aa13.04□□□□□ -0.32
AC004872.1-201ENST00000456062 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
AC004872.1-201ENST00000456062 VARS2Q5ST30 1063 aaKnown RBP12.97□□□□□ -0.33
AC004872.1-201ENST00000456062 MFRPQ9BY79 579 aa12.97□□□□□ -0.33
AC004872.1-201ENST00000456062 STK24Q9Y6E0 443 aa12.97□□□□□ -0.33
AC004872.1-201ENST00000456062 STK25O00506 426 aa12.93□□□□□ -0.34
AC004872.1-201ENST00000456062 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
AC004872.1-201ENST00000456062 ZNF687Q8N1G0 1237 aa12.93□□□□□ -0.34
AC004872.1-201ENST00000456062 KIF3CO14782 793 aa12.91□□□□□ -0.34
AC004872.1-201ENST00000456062 PKD2Q13563 968 aa12.9□□□□□ -0.34
AC004872.1-201ENST00000456062 ARSIQ5FYB1 569 aa12.87□□□□□ -0.35
AC004872.1-201ENST00000456062 RGL2O15211 777 aa12.86□□□□□ -0.35
AC004872.1-201ENST00000456062 C2orf72A6NCS6 295 aa12.83□□□□□ -0.36
AC004872.1-201ENST00000456062 ZNF316A6NFI3 1004 aaPredicted RBP12.82□□□□□ -0.36
AC004872.1-201ENST00000456062 KHSRPQ92945 711 aaKnown RBP eCLIP12.8□□□□□ -0.36
AC004872.1-201ENST00000456062 RNF166Q96A37 237 aaPredicted RBP12.8□□□□□ -0.36
AC004872.1-201ENST00000456062 SLC34A2O95436 690 aa12.79□□□□□ -0.36
AC004872.1-201ENST00000456062 PTGER2P43116 358 aa12.79□□□□□ -0.36
AC004872.1-201ENST00000456062 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
AC004872.1-201ENST00000456062 TMC2Q8TDI7 906 aa12.72□□□□□ -0.37
AC004872.1-201ENST00000456062 PCDHGA4Q9Y5G9 962 aa12.71□□□□□ -0.37
AC004872.1-201ENST00000456062 PPP1R37O75864 691 aa12.7□□□□□ -0.38
AC004872.1-201ENST00000456062 NUDT7P0C024 238 aa12.7□□□□□ -0.38
AC004872.1-201ENST00000456062 PBX2P40425 430 aa12.7□□□□□ -0.38
AC004872.1-201ENST00000456062 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
AC004872.1-201ENST00000456062 LHX6Q9UPM6 363 aa12.66□□□□□ -0.38
AC004872.1-201ENST00000456062 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
AC004872.1-201ENST00000456062 HS6ST3Q8IZP7 471 aa12.64□□□□□ -0.39
AC004872.1-201ENST00000456062 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
AC004872.1-201ENST00000456062 KDM4FA0A1W2PPD8 638 aa12.62□□□□□ -0.39
AC004872.1-201ENST00000456062 PTCD2Q8WV60 388 aaKnown RBP12.6□□□□□ -0.39
AC004872.1-201ENST00000456062 PSDA5PKW4 1024 aaPredicted RBP12.59□□□□□ -0.39
AC004872.1-201ENST00000456062 FOXK1P85037 733 aa12.59□□□□□ -0.39
AC004872.1-201ENST00000456062 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
AC004872.1-201ENST00000456062 DNAJC5Q9H3Z4 198 aa12.56□□□□□ -0.4
AC004872.1-201ENST00000456062 AXIN2Q9Y2T1 843 aa12.54□□□□□ -0.4
AC004872.1-201ENST00000456062 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
AC004872.1-201ENST00000456062 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
AC004872.1-201ENST00000456062 DSG2Q14126 1118 aa12.49□□□□□ -0.41
AC004872.1-201ENST00000456062 ADGRD1Q6QNK2 874 aa12.48□□□□□ -0.41
AC004872.1-201ENST00000456062 TK2O00142 265 aa12.47□□□□□ -0.41
AC004872.1-201ENST00000456062 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
AC004872.1-201ENST00000456062 TBC1D12O60347 775 aa12.45□□□□□ -0.42
AC004872.1-201ENST00000456062 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
AC004872.1-201ENST00000456062 RYDENQ9NUL5 291 aaKnown RBP12.44□□□□□ -0.42
AC004872.1-201ENST00000456062 HRO43593 1189 aa12.42□□□□□ -0.42
AC004872.1-201ENST00000456062 PPP4R3BQ5MIZ7 849 aa12.42□□□□□ -0.42
AC004872.1-201ENST00000456062 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.42
AC004872.1-201ENST00000456062 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
AC004872.1-201ENST00000456062 CRISPLD2Q9H0B8 497 aa12.4□□□□□ -0.42
AC004872.1-201ENST00000456062 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
AC004872.1-201ENST00000456062 PSEN2P49810 448 aa12.39□□□□□ -0.43
AC004872.1-201ENST00000456062 PPP1R15BQ5SWA1 713 aa12.32□□□□□ -0.44
AC004872.1-201ENST00000456062 PLA2G2EQ9NZK7 142 aa12.31□□□□□ -0.44
AC004872.1-201ENST00000456062 KCNH8Q96L42 1107 aa12.3□□□□□ -0.44
AC004872.1-201ENST00000456062 KCNK17Q96T54 332 aa12.3□□□□□ -0.44
AC004872.1-201ENST00000456062 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
AC004872.1-201ENST00000456062 BCL2L12Q9HB09 334 aa12.29□□□□□ -0.44
AC004872.1-201ENST00000456062 UPF1Q92900 1129 aaKnown RBP eCLIP12.28□□□□□ -0.44
AC004872.1-201ENST00000456062 SLC4A5Q9BY07 1137 aa12.28□□□□□ -0.44
AC004872.1-201ENST00000456062 PDE4AP27815 886 aa12.27□□□□□ -0.45
AC004872.1-201ENST00000456062 FOSBP53539 338 aa12.26□□□□□ -0.45
AC004872.1-201ENST00000456062 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
AC004872.1-201ENST00000456062 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
AC004872.1-201ENST00000456062 GTPBP6O43824 516 aaPredicted RBP12.25□□□□□ -0.45
AC004872.1-201ENST00000456062 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
AC004872.1-201ENST00000456062 KCTD12Q96CX2 325 aaKnown RBP12.23□□□□□ -0.45
AC004872.1-201ENST00000456062 JPH4Q96JJ6 628 aa12.21□□□□□ -0.45
AC004872.1-201ENST00000456062 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
AC004872.1-201ENST00000456062 MFSD10Q14728 455 aa12.2□□□□□ -0.46
AC004872.1-201ENST00000456062 BHMG1C9JSJ3 638 aaPredicted RBP12.19□□□□□ -0.46
AC004872.1-201ENST00000456062 EVI5O60447 810 aa12.18□□□□□ -0.46
AC004872.1-201ENST00000456062 PTPREP23469 700 aa12.18□□□□□ -0.46
AC004872.1-201ENST00000456062 DDX27Q96GQ7 796 aaKnown RBP12.17□□□□□ -0.46
AC004872.1-201ENST00000456062 ZBED2Q9BTP6 218 aa12.17□□□□□ -0.46
AC004872.1-201ENST00000456062 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
AC004872.1-201ENST00000456062 ZDHHC16Q969W1 377 aa12.14□□□□□ -0.47
AC004872.1-201ENST00000456062 ADAM33Q9BZ11 813 aa12.13□□□□□ -0.47
AC004872.1-201ENST00000456062 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
AC004872.1-201ENST00000456062 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
AC004872.1-201ENST00000456062 MAP3K9P80192 1104 aa12.09□□□□□ -0.47
AC004872.1-201ENST00000456062 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
AC004872.1-201ENST00000456062 PTPN5P54829 565 aa12.07□□□□□ -0.48
AC004872.1-201ENST00000456062 MRPL50Q8N5N7 158 aaKnown RBP12.07□□□□□ -0.48
AC004872.1-201ENST00000456062 NBPF3Q9H094 633 aa12.06□□□□□ -0.48
AC004872.1-201ENST00000456062 PPP1R3GB7ZBB8 358 aa12.05□□□□□ -0.48
AC004872.1-201ENST00000456062 PCDHGA10Q9Y5H3 936 aa12.05□□□□□ -0.48
AC004872.1-201ENST00000456062 WNT2BQ93097 391 aa12.04□□□□□ -0.48
AC004872.1-201ENST00000456062 CADPS2Q86UW7 1296 aa12.03□□□□□ -0.48
AC004872.1-201ENST00000456062 GOLGA8CPA6NN73 597 aa12.02□□□□□ -0.49
AC004872.1-201ENST00000456062 RGS20O76081 388 aa12.02□□□□□ -0.49
AC004872.1-201ENST00000456062 PHF14O94880 888 aa12.01□□□□□ -0.49
AC004872.1-201ENST00000456062 FBXW7Q969H0 707 aa12.01□□□□□ -0.49
AC004872.1-201ENST00000456062 CAMK2BQ13554 666 aa12□□□□□ -0.49
AC004872.1-201ENST00000456062 TYW1BQ6NUM6 668 aa12□□□□□ -0.49
AC004872.1-201ENST00000456062 RABGEF1Q9UJ41 708 aa12□□□□□ -0.49
AC004872.1-201ENST00000456062 COL9A1P20849 921 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms