RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SCAPERQ9BY12 1400 aa39.01■■■■□ 3.84
PTPRA-208ENST00000455631 PLCH2O75038 1416 aa38.97■■■■□ 3.83
PTPRA-208ENST00000455631 CERKQ8TCT0 537 aa38.95■■■■□ 3.83
PTPRA-208ENST00000455631 ARHGEF12Q9NZN5 1544 aa38.92■■■■□ 3.82
PTPRA-208ENST00000455631 MYO5CQ9NQX4 1742 aa38.92■■■■□ 3.82
PTPRA-208ENST00000455631 C9orf84Q5VXU9 1444 aa38.91■■■■□ 3.82
PTPRA-208ENST00000455631 ATP10AO60312 1499 aa38.91■■■■□ 3.82
PTPRA-208ENST00000455631 PREX1Q8TCU6 1659 aa38.9■■■■□ 3.82
PTPRA-208ENST00000455631 ATP1B4Q9UN42 357 aaPredicted RBP38.83■■■■□ 3.81
PTPRA-208ENST00000455631 EFCAB2Q5VUJ9 269 aa38.81■■■■□ 3.8
PTPRA-208ENST00000455631 KIF14Q15058 1648 aa38.79■■■■□ 3.8
PTPRA-208ENST00000455631 CEBPAP49715 358 aaPredicted RBP38.77■■■■□ 3.8
PTPRA-208ENST00000455631 FMN1Q68DA7 1419 aa38.77■■■■□ 3.8
PTPRA-208ENST00000455631 ZNF518AQ6AHZ1 1483 aa38.76■■■■□ 3.8
PTPRA-208ENST00000455631 ARHGAP5Q13017 1502 aa38.73■■■■□ 3.79
PTPRA-208ENST00000455631 CDK11AQ9UQ88 783 aaPredicted RBP38.72■■■■□ 3.79
PTPRA-208ENST00000455631 KDM5CP41229 1560 aa38.71■■■■□ 3.79
PTPRA-208ENST00000455631 EHMT2Q96KQ7 1210 aa38.7■■■■□ 3.79
PTPRA-208ENST00000455631 STRCQ7RTU9 1775 aa38.7■■■■□ 3.79
PTPRA-208ENST00000455631 UHRF1BP1Q6BDS2 1440 aa38.68■■■■□ 3.78
PTPRA-208ENST00000455631 UBTFP17480 764 aaKnown RBP38.66■■■■□ 3.78
PTPRA-208ENST00000455631 MYT1LQ9UL68 1186 aa38.66■■■■□ 3.78
PTPRA-208ENST00000455631 ARHGAP35Q9NRY4 1499 aa38.66■■■■□ 3.78
PTPRA-208ENST00000455631 TROQ12816 1431 aaPredicted RBP38.65■■■■□ 3.78
PTPRA-208ENST00000455631 AFAP1Q8N556 730 aa38.65■■■■□ 3.78
PTPRA-208ENST00000455631 DIP2CQ9Y2E4 1556 aa38.65■■■■□ 3.78
PTPRA-208ENST00000455631 DMRT2Q9Y5R5 561 aa38.63■■■■□ 3.77
PTPRA-208ENST00000455631 CLIP1P30622 1438 aa38.63■■■■□ 3.77
PTPRA-208ENST00000455631 REREQ9P2R6 1566 aa38.59■■■■□ 3.77
PTPRA-208ENST00000455631 ABCA6Q8N139 1617 aa38.58■■■■□ 3.77
PTPRA-208ENST00000455631 SETD1BQ9UPS6 1966 aaKnown RBP38.58■■■■□ 3.77
PTPRA-208ENST00000455631 LRRIQ1Q96JM4 1722 aa38.57■■■■□ 3.76
PTPRA-208ENST00000455631 C3P01024 1663 aa38.56■■■■□ 3.76
PTPRA-208ENST00000455631 CDC42BPBQ9Y5S2 1711 aa38.55■■■■□ 3.76
PTPRA-208ENST00000455631 DISP3Q9P2K9 1392 aa38.54■■■■□ 3.76
PTPRA-208ENST00000455631 MLH3Q9UHC1 1453 aa38.5■■■■□ 3.75
PTPRA-208ENST00000455631 PREX2Q70Z35 1606 aa38.49■■■■□ 3.75
PTPRA-208ENST00000455631 ABCC1P33527 1531 aa38.47■■■■□ 3.75
PTPRA-208ENST00000455631 ESF1Q9H501 851 aaKnown RBP38.46■■■■□ 3.75
PTPRA-208ENST00000455631 AGLP35573 1532 aa38.45■■■■□ 3.75
PTPRA-208ENST00000455631 ITSN2Q9NZM3 1697 aa38.45■■■■□ 3.75
PTPRA-208ENST00000455631 PTPRTO14522 1441 aa38.45■■■■□ 3.75
PTPRA-208ENST00000455631 TRAPPC8Q9Y2L5 1435 aa38.44■■■■□ 3.74
PTPRA-208ENST00000455631 ILDR2Q71H61 639 aa38.42■■■■□ 3.74
PTPRA-208ENST00000455631 KIDINS220Q9ULH0 1771 aa38.36■■■■□ 3.73
PTPRA-208ENST00000455631 SPATA31D1Q6ZQQ2 1576 aa38.34■■■■□ 3.73
PTPRA-208ENST00000455631 CCDC18Q5T9S5 1454 aa38.34■■■■□ 3.73
PTPRA-208ENST00000455631 CNTLNQ9NXG0 1405 aa38.32■■■■□ 3.73
PTPRA-208ENST00000455631 LTBP4Q8N2S1 1624 aa38.32■■■■□ 3.73
PTPRA-208ENST00000455631 CDC42BPAQ5VT25 1732 aa38.31■■■■□ 3.72
PTPRA-208ENST00000455631 NCOA1Q15788 1441 aa38.29■■■■□ 3.72
PTPRA-208ENST00000455631 SOCS7O14512 581 aa38.29■■■■□ 3.72
PTPRA-208ENST00000455631 CASKIN1Q8WXD9 1431 aa38.27■■■■□ 3.72
PTPRA-208ENST00000455631 MROH2AA6NES4 1674 aa38.23■■■■□ 3.71
PTPRA-208ENST00000455631 IQSEC2Q5JU85 1478 aa38.23■■■■□ 3.71
PTPRA-208ENST00000455631 SAMD9LQ8IVG5 1584 aa38.23■■■■□ 3.71
PTPRA-208ENST00000455631 CAMSAP1Q5T5Y3 1602 aa38.22■■■■□ 3.71
PTPRA-208ENST00000455631 NPATQ14207 1427 aa38.19■■■■□ 3.7
PTPRA-208ENST00000455631 SYCP2Q9BX26 1530 aa38.17■■■■□ 3.7
PTPRA-208ENST00000455631 ZNF777Q9ULD5 760 aaPredicted RBP38.17■■■■□ 3.7
PTPRA-208ENST00000455631 SUPT6HQ7KZ85 1726 aaKnown RBP38.16■■■■□ 3.7
PTPRA-208ENST00000455631 ZMYM3Q14202 1370 aa38.12■■■■□ 3.69
PTPRA-208ENST00000455631 FYCO1Q9BQS8 1478 aa38.1■■■■□ 3.69
PTPRA-208ENST00000455631 SPAG9O60271 1321 aaKnown RBP38.1■■■■□ 3.69
PTPRA-208ENST00000455631 CLTCQ00610 1675 aaKnown RBP38.09■■■■□ 3.69
PTPRA-208ENST00000455631 ATP7AQ04656 1500 aa38.07■■■■□ 3.69
PTPRA-208ENST00000455631 MYO3AQ8NEV4 1616 aa38.07■■■■□ 3.68
PTPRA-208ENST00000455631 GPATCH8Q9UKJ3 1502 aaKnown RBP38.06■■■■□ 3.68
PTPRA-208ENST00000455631 ZNF142P52746 1687 aaPredicted RBP38.05■■■■□ 3.68
PTPRA-208ENST00000455631 NCKAP5LQ9HCH0 1330 aa38.05■■■■□ 3.68
PTPRA-208ENST00000455631 CHIC1Q5VXU3 224 aa38.04■■■■□ 3.68
PTPRA-208ENST00000455631 HNRNPMP52272 730 aaKnown RBP eCLIP38.03■■■■□ 3.684e-7■■■■■ 28.7
PTPRA-208ENST00000455631 PLXNC1O60486 1568 aa38.02■■■■□ 3.68
PTPRA-208ENST00000455631 INO80Q9ULG1 1556 aaPredicted RBP38.02■■■■□ 3.68
PTPRA-208ENST00000455631 ZNF335Q9H4Z2 1342 aaPredicted RBP38.02■■■■□ 3.68
PTPRA-208ENST00000455631 CEP170BQ9Y4F5 1589 aaPredicted RBP37.99■■■■□ 3.67
PTPRA-208ENST00000455631 A2MP01023 1474 aa37.99■■■■□ 3.67
PTPRA-208ENST00000455631 PLA2R1Q13018 1463 aa37.97■■■■□ 3.67
PTPRA-208ENST00000455631 PLEKHH2Q8IVE3 1493 aa37.96■■■■□ 3.67
PTPRA-208ENST00000455631 KIAA1107Q9UPP5 1409 aa37.95■■■■□ 3.67
PTPRA-208ENST00000455631 PTPRKQ15262 1439 aa37.95■■■■□ 3.67
PTPRA-208ENST00000455631 UBAP1LF5GYI3 381 aa37.94■■■■□ 3.66
PTPRA-208ENST00000455631 PKD2Q13563 968 aa37.93■■■■□ 3.66
PTPRA-208ENST00000455631 CFDP1Q9UEE9 299 aaPredicted RBP37.92■■■■□ 3.66
PTPRA-208ENST00000455631 TCOF1Q13428 1488 aaKnown RBP37.91■■■■□ 3.66
PTPRA-208ENST00000455631 GGT6Q6P531 493 aa37.91■■■■□ 3.66
PTPRA-208ENST00000455631 CCNB3Q8WWL7 1395 aa37.89■■■■□ 3.66
PTPRA-208ENST00000455631 ADGBQ8N7X0 1667 aa37.88■■■■□ 3.65
PTPRA-208ENST00000455631 PPP6R1Q9UPN7 881 aa37.81■■■■□ 3.64
PTPRA-208ENST00000455631 MTUS2Q5JR59 1369 aa37.79■■■■□ 3.64
PTPRA-208ENST00000455631 A2ML1A8K2U0 1454 aa37.77■■■■□ 3.64
PTPRA-208ENST00000455631 DNMT1P26358 1616 aaKnown RBP37.76■■■■□ 3.63
PTPRA-208ENST00000455631 TIAM1Q13009 1591 aa37.73■■■■□ 3.63
PTPRA-208ENST00000455631 POLR1AO95602 1720 aaPredicted RBP37.71■■■■□ 3.63
PTPRA-208ENST00000455631 ZNF644Q9H582 1327 aaPredicted RBP37.7■■■■□ 3.63
PTPRA-208ENST00000455631 MBD5Q9P267 1494 aa37.67■■■■□ 3.62
PTPRA-208ENST00000455631 SCAF1Q9H7N4 1312 aaKnown RBP37.66■■■■□ 3.62
PTPRA-208ENST00000455631 EHBP1L1Q8N3D4 1523 aa37.64■■■■□ 3.62
PTPRA-208ENST00000455631 NEURL4Q96JN8 1562 aa37.63■■■■□ 3.62
PTPRA-208ENST00000455631 RTEL1-TNFRSF6BF6WH68 1400 aa37.63■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms