RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 ZNF687Q8N1G0 1237 aa14.09□□□□□ -0.15
CUL3-208ENST00000454323 NLRP6P59044 892 aa14.08□□□□□ -0.16
CUL3-208ENST00000454323 PHF8Q9UPP1 1060 aa14.06□□□□□ -0.16
CUL3-208ENST00000454323 MYT1LQ9UL68 1186 aa14.04□□□□□ -0.16
CUL3-208ENST00000454323 GPR153Q6NV75 609 aa14.03□□□□□ -0.16
CUL3-208ENST00000454323 TMEM92Q6UXU6 159 aa14.03□□□□□ -0.16
CUL3-208ENST00000454323 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
CUL3-208ENST00000454323 MS4A4AQ96JQ5 239 aa14.03□□□□□ -0.16
CUL3-208ENST00000454323 BCL11BQ9C0K0 894 aaPredicted RBP13.95□□□□□ -0.18
CUL3-208ENST00000454323 ARSIQ5FYB1 569 aa13.93□□□□□ -0.18
CUL3-208ENST00000454323 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
CUL3-208ENST00000454323 ZNF316A6NFI3 1004 aaPredicted RBP13.92□□□□□ -0.18
CUL3-208ENST00000454323 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
CUL3-208ENST00000454323 PBX2P40425 430 aa13.89□□□□□ -0.19
CUL3-208ENST00000454323 STK25O00506 426 aa13.86□□□□□ -0.19
CUL3-208ENST00000454323 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
CUL3-208ENST00000454323 LSM11P83369 360 aaKnown RBP eCLIP13.83□□□□□ -0.2
CUL3-208ENST00000454323 MFRPQ9BY79 579 aa13.82□□□□□ -0.2
CUL3-208ENST00000454323 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
CUL3-208ENST00000454323 KIF3CO14782 793 aa13.8□□□□□ -0.2
CUL3-208ENST00000454323 SLC34A2O95436 690 aa13.8□□□□□ -0.2
CUL3-208ENST00000454323 C2orf72A6NCS6 295 aa13.79□□□□□ -0.2
CUL3-208ENST00000454323 ECM2O94769 699 aaPredicted RBP13.79□□□□□ -0.2
CUL3-208ENST00000454323 PSDA5PKW4 1024 aaPredicted RBP13.78□□□□□ -0.2
CUL3-208ENST00000454323 KHSRPQ92945 711 aaKnown RBP eCLIP13.75□□□□□ -0.214e-10■■■□□ 16
CUL3-208ENST00000454323 NUDT7P0C024 238 aa13.74□□□□□ -0.21
CUL3-208ENST00000454323 PCDHGA4Q9Y5G9 962 aa13.73□□□□□ -0.21
CUL3-208ENST00000454323 LHX6Q9UPM6 363 aa13.69□□□□□ -0.22
CUL3-208ENST00000454323 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
CUL3-208ENST00000454323 ARHGAP33O14559 1287 aa13.62□□□□□ -0.23
CUL3-208ENST00000454323 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
CUL3-208ENST00000454323 TK2O00142 265 aa13.58□□□□□ -0.24
CUL3-208ENST00000454323 TBC1D12O60347 775 aa13.58□□□□□ -0.24
CUL3-208ENST00000454323 ADGRD1Q6QNK2 874 aa13.58□□□□□ -0.24
CUL3-208ENST00000454323 RGL2O15211 777 aa13.57□□□□□ -0.24
CUL3-208ENST00000454323 AXIN2Q9Y2T1 843 aa13.57□□□□□ -0.24
CUL3-208ENST00000454323 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
CUL3-208ENST00000454323 PLA2G2EQ9NZK7 142 aa13.55□□□□□ -0.24
CUL3-208ENST00000454323 PKD2Q13563 968 aa13.54□□□□□ -0.24
CUL3-208ENST00000454323 PPP4R3BQ5MIZ7 849 aa13.54□□□□□ -0.24
CUL3-208ENST00000454323 STAC3Q96MF2 364 aa13.54□□□□□ -0.24
CUL3-208ENST00000454323 POTEEQ6S8J3 1075 aa13.53□□□□□ -0.24
CUL3-208ENST00000454323 FOXK1P85037 733 aa13.52□□□□□ -0.25
CUL3-208ENST00000454323 PLPP6Q8IY26 295 aa13.48□□□□□ -0.25
CUL3-208ENST00000454323 GPHNQ9NQX3 736 aaPredicted RBP13.48□□□□□ -0.25
CUL3-208ENST00000454323 PPP1R37O75864 691 aa13.47□□□□□ -0.25
CUL3-208ENST00000454323 RYDENQ9NUL5 291 aaKnown RBP13.47□□□□□ -0.25
CUL3-208ENST00000454323 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
CUL3-208ENST00000454323 HS6ST3Q8IZP7 471 aa13.43□□□□□ -0.26
CUL3-208ENST00000454323 HRO43593 1189 aa13.42□□□□□ -0.26
CUL3-208ENST00000454323 PSEN2P49810 448 aa13.38□□□□□ -0.27
CUL3-208ENST00000454323 DMRTA1Q5VZB9 504 aa13.37□□□□□ -0.27
CUL3-208ENST00000454323 DSG2Q14126 1118 aa13.36□□□□□ -0.27
CUL3-208ENST00000454323 KCTD12Q96CX2 325 aaKnown RBP13.35□□□□□ -0.27
CUL3-208ENST00000454323 KCNK17Q96T54 332 aa13.35□□□□□ -0.27
CUL3-208ENST00000454323 SLC4A5Q9BY07 1137 aa13.3□□□□□ -0.28
CUL3-208ENST00000454323 OXER1Q8TDS5 423 aa13.29□□□□□ -0.28
CUL3-208ENST00000454323 RGS20O76081 388 aa13.28□□□□□ -0.28
CUL3-208ENST00000454323 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.29
CUL3-208ENST00000454323 ZNF454Q8N9F8 522 aa13.27□□□□□ -0.29
CUL3-208ENST00000454323 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.29
CUL3-208ENST00000454323 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.29
CUL3-208ENST00000454323 VPS9D1Q9Y2B5 631 aa13.27□□□□□ -0.29
CUL3-208ENST00000454323 GOLGA8CPA6NN73 597 aa13.25□□□□□ -0.29
CUL3-208ENST00000454323 PTPREP23469 700 aa13.25□□□□□ -0.29
CUL3-208ENST00000454323 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
CUL3-208ENST00000454323 IFFO2Q5TF58 517 aa13.23□□□□□ -0.29
CUL3-208ENST00000454323 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
CUL3-208ENST00000454323 PDE4AP27815 886 aa13.21□□□□□ -0.29
CUL3-208ENST00000454323 CRISPLD2Q9H0B8 497 aa13.21□□□□□ -0.29
CUL3-208ENST00000454323 PTPN5P54829 565 aa13.2□□□□□ -0.3
CUL3-208ENST00000454323 NBPF3Q9H094 633 aa13.2□□□□□ -0.3
CUL3-208ENST00000454323 FOSBP53539 338 aa13.18□□□□□ -0.3
CUL3-208ENST00000454323 MRPL50Q8N5N7 158 aaKnown RBP13.18□□□□□ -0.3
CUL3-208ENST00000454323 JPH4Q96JJ6 628 aa13.18□□□□□ -0.3
CUL3-208ENST00000454323 THSD4Q6ZMP0 1018 aa13.16□□□□□ -0.3
CUL3-208ENST00000454323 WNT2BQ93097 391 aa13.14□□□□□ -0.31
CUL3-208ENST00000454323 BHMG1C9JSJ3 638 aaPredicted RBP13.13□□□□□ -0.31
CUL3-208ENST00000454323 ZDHHC16Q969W1 377 aa13.13□□□□□ -0.31
CUL3-208ENST00000454323 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
CUL3-208ENST00000454323 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
CUL3-208ENST00000454323 EVI5O60447 810 aa13.1□□□□□ -0.31
CUL3-208ENST00000454323 MAP3K9P80192 1104 aa13.07□□□□□ -0.32
CUL3-208ENST00000454323 NKX1-1Q15270 411 aaPredicted RBP13.07□□□□□ -0.32
CUL3-208ENST00000454323 DDX27Q96GQ7 796 aaKnown RBP13.07□□□□□ -0.32
CUL3-208ENST00000454323 A0A0G2JS52 829 aa13.06□□□□□ -0.32
CUL3-208ENST00000454323 IRX2Q9BZI1 471 aaPredicted RBP13.06□□□□□ -0.32
CUL3-208ENST00000454323 PPP1R3GB7ZBB8 358 aa13.04□□□□□ -0.32
CUL3-208ENST00000454323 ANKK1Q8NFD2 765 aa13.03□□□□□ -0.32
CUL3-208ENST00000454323 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
CUL3-208ENST00000454323 FBXW7Q969H0 707 aa13.02□□□□□ -0.33
CUL3-208ENST00000454323 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
CUL3-208ENST00000454323 ADAM33Q9BZ11 813 aa13.02□□□□□ -0.33
CUL3-208ENST00000454323 NYAP1Q6ZVC0 841 aa13.01□□□□□ -0.33
CUL3-208ENST00000454323 RABGEF1Q9UJ41 708 aa13.01□□□□□ -0.33
CUL3-208ENST00000454323 MFSD10Q14728 455 aa12.98□□□□□ -0.33
CUL3-208ENST00000454323 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
CUL3-208ENST00000454323 TYW1BQ6NUM6 668 aa12.95□□□□□ -0.34
CUL3-208ENST00000454323 PHF14O94880 888 aa12.94□□□□□ -0.34
CUL3-208ENST00000454323 ONECUT3O60422 494 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms