RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 ABCA8O94911 1581 aa30.05■■■□□ 2.4
PUF60-203ENST00000453551 MPHOSPH9Q99550 1183 aa30.05■■■□□ 2.4
PUF60-203ENST00000453551 CCER2I3L3R5 266 aa30.04■■■□□ 2.4
PUF60-203ENST00000453551 PRG4Q92954 1404 aaPredicted RBP30.04■■■□□ 2.4
PUF60-203ENST00000453551 CAMSAP2Q08AD1 1489 aa30.03■■■□□ 2.4
PUF60-203ENST00000453551 ADGBQ8N7X0 1667 aa30.03■■■□□ 2.4
PUF60-203ENST00000453551 ARID3CA6NKF2 412 aa30.03■■■□□ 2.4
PUF60-203ENST00000453551 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
PUF60-203ENST00000453551 ADGRL2O95490 1459 aa30.02■■■□□ 2.4
PUF60-203ENST00000453551 TRIM52Q96A61 297 aa30.01■■■□□ 2.4
PUF60-203ENST00000453551 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
PUF60-203ENST00000453551 CROCC2H7BZ55 1655 aa29.99■■■□□ 2.39
PUF60-203ENST00000453551 KIF14Q15058 1648 aa29.97■■■□□ 2.39
PUF60-203ENST00000453551 ANKRD30BQ9BXX2 1392 aa29.97■■■□□ 2.39
PUF60-203ENST00000453551 RPRD2Q5VT52 1461 aaKnown RBP29.95■■■□□ 2.39
PUF60-203ENST00000453551 ZNF644Q9H582 1327 aaPredicted RBP29.94■■■□□ 2.38
PUF60-203ENST00000453551 NCOA1Q15788 1441 aa29.91■■■□□ 2.38
PUF60-203ENST00000453551 ANP32CO43423 234 aa29.91■■■□□ 2.38
PUF60-203ENST00000453551 CFDP1Q9UEE9 299 aaPredicted RBP29.9■■■□□ 2.38
PUF60-203ENST00000453551 ABCC10Q5T3U5 1492 aa29.9■■■□□ 2.38
PUF60-203ENST00000453551 TEX14Q8IWB6 1497 aa29.88■■■□□ 2.37
PUF60-203ENST00000453551 SHANK2Q9UPX8 1470 aa29.88■■■□□ 2.37
PUF60-203ENST00000453551 KCNH8Q96L42 1107 aa29.88■■■□□ 2.37
PUF60-203ENST00000453551 HIRIP3Q9BW71 556 aaPredicted RBP29.87■■■□□ 2.37
PUF60-203ENST00000453551 PZPP20742 1482 aa29.86■■■□□ 2.37
PUF60-203ENST00000453551 ATP10BO94823 1461 aa29.86■■■□□ 2.37
PUF60-203ENST00000453551 FBLN2P98095 1184 aa29.85■■■□□ 2.37
PUF60-203ENST00000453551 CDC42BPAQ5VT25 1732 aa29.84■■■□□ 2.37
PUF60-203ENST00000453551 L3MBTL2Q969R5 705 aa29.8■■■□□ 2.36
PUF60-203ENST00000453551 ANKRD30AQ9BXX3 1397 aa29.8■■■□□ 2.36
PUF60-203ENST00000453551 PLEKHD1A6NEE1 506 aa29.78■■■□□ 2.36
PUF60-203ENST00000453551 HSPA5P11021 654 aaKnown RBP29.78■■■□□ 2.36
PUF60-203ENST00000453551 EIF4G2P78344 907 aaKnown RBP eCLIP29.78■■■□□ 2.36
PUF60-203ENST00000453551 SUPT16HQ9Y5B9 1047 aaKnown RBP29.78■■■□□ 2.36
PUF60-203ENST00000453551 SLC4A1APQ9BWU0 796 aaKnown RBP29.75■■■□□ 2.35
PUF60-203ENST00000453551 ARHGEF5Q12774 1597 aa29.74■■■□□ 2.35
PUF60-203ENST00000453551 KIAA1107Q9UPP5 1409 aa29.74■■■□□ 2.35
PUF60-203ENST00000453551 KDM5DQ9BY66 1539 aa29.72■■■□□ 2.35
PUF60-203ENST00000453551 WASHC2AQ641Q2 1341 aa29.71■■■□□ 2.35
PUF60-203ENST00000453551 FOXD1Q16676 465 aa29.71■■■□□ 2.35
PUF60-203ENST00000453551 MBD5Q9P267 1494 aa29.7■■■□□ 2.34
PUF60-203ENST00000453551 SHROOM2Q13796 1616 aa29.7■■■□□ 2.34
PUF60-203ENST00000453551 PTPRGP23470 1445 aa29.69■■■□□ 2.34
PUF60-203ENST00000453551 ANKRD50Q9ULJ7 1429 aa29.69■■■□□ 2.34
PUF60-203ENST00000453551 C9orf84Q5VXU9 1444 aa29.67■■■□□ 2.34
PUF60-203ENST00000453551 CNTLNQ9NXG0 1405 aa29.67■■■□□ 2.34
PUF60-203ENST00000453551 POLR1AO95602 1720 aaPredicted RBP29.66■■■□□ 2.34
PUF60-203ENST00000453551 SPATA31E1Q6ZUB1 1445 aa29.65■■■□□ 2.34
PUF60-203ENST00000453551 CHD1O14646 1710 aa29.64■■■□□ 2.33
PUF60-203ENST00000453551 PREX2Q70Z35 1606 aa29.62■■■□□ 2.33
PUF60-203ENST00000453551 NBPF8Q3BBV2 869 aa29.62■■■□□ 2.33
PUF60-203ENST00000453551 ZNF777Q9ULD5 760 aaPredicted RBP29.62■■■□□ 2.33
PUF60-203ENST00000453551 CCDC7Q96M83 1385 aa29.61■■■□□ 2.33
PUF60-203ENST00000453551 SAMD9LQ8IVG5 1584 aa29.54■■■□□ 2.32
PUF60-203ENST00000453551 CCDC141Q6ZP82 1450 aa29.54■■■□□ 2.32
PUF60-203ENST00000453551 CDC42BPBQ9Y5S2 1711 aa29.54■■■□□ 2.32
PUF60-203ENST00000453551 RSPH4AQ5TD94 716 aa29.53■■■□□ 2.32
PUF60-203ENST00000453551 MAST1Q9Y2H9 1570 aa29.53■■■□□ 2.32
PUF60-203ENST00000453551 ARHGEF12Q9NZN5 1544 aa29.53■■■□□ 2.32
PUF60-203ENST00000453551 UHRF1BP1Q6BDS2 1440 aa29.52■■■□□ 2.32
PUF60-203ENST00000453551 TSPY4P0CV99 314 aa29.5■■■□□ 2.31
PUF60-203ENST00000453551 TSPY10P0CW01 314 aa29.5■■■□□ 2.31
PUF60-203ENST00000453551 PKD2Q13563 968 aa29.5■■■□□ 2.31
PUF60-203ENST00000453551 KIF15Q9NS87 1388 aa29.48■■■□□ 2.31
PUF60-203ENST00000453551 ABCC2Q92887 1545 aa29.47■■■□□ 2.31
PUF60-203ENST00000453551 NUP155O75694 1391 aa29.46■■■□□ 2.31
PUF60-203ENST00000453551 C11orf95C9JLR9 678 aaPredicted RBP29.45■■■□□ 2.31
PUF60-203ENST00000453551 RALGAPBQ86X10 1494 aa29.43■■■□□ 2.3
PUF60-203ENST00000453551 KIF7Q2M1P5 1343 aa29.41■■■□□ 2.3
PUF60-203ENST00000453551 PLEKHH2Q8IVE3 1493 aa29.41■■■□□ 2.3
PUF60-203ENST00000453551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.4■■■□□ 2.36e-10■■□□□ 13
PUF60-203ENST00000453551 KDM5CP41229 1560 aa29.4■■■□□ 2.3
PUF60-203ENST00000453551 ARID4BQ4LE39 1312 aaPredicted RBP29.4■■■□□ 2.3
PUF60-203ENST00000453551 TTC37Q6PGP7 1564 aa29.4■■■□□ 2.3
PUF60-203ENST00000453551 UNC13BO14795 1591 aa29.38■■■□□ 2.29
PUF60-203ENST00000453551 PLXNC1O60486 1568 aa29.38■■■□□ 2.29
PUF60-203ENST00000453551 HNRNPMP52272 730 aaKnown RBP eCLIP29.37■■■□□ 2.297e-7■■■□□ 18.4
PUF60-203ENST00000453551 PRKRIP1Q9H875 184 aaPredicted RBP29.36■■■□□ 2.29
PUF60-203ENST00000453551 MYO5CQ9NQX4 1742 aa29.36■■■□□ 2.29
PUF60-203ENST00000453551 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
PUF60-203ENST00000453551 UHRF1BP1LA0JNW5 1464 aa29.35■■■□□ 2.29
PUF60-203ENST00000453551 USP47Q96K76 1375 aa29.35■■■□□ 2.29
PUF60-203ENST00000453551 SYCP2Q9BX26 1530 aa29.35■■■□□ 2.29
PUF60-203ENST00000453551 FAM135AQ9P2D6 1515 aa29.34■■■□□ 2.29
PUF60-203ENST00000453551 ARHGAP5Q13017 1502 aa29.33■■■□□ 2.29
PUF60-203ENST00000453551 NEFLP07196 543 aa29.32■■■□□ 2.28
PUF60-203ENST00000453551 ERCC6L2Q5T890 1561 aa29.31■■■□□ 2.28
PUF60-203ENST00000453551 BCORL1Q5H9F3 1711 aa29.3■■■□□ 2.28
PUF60-203ENST00000453551 FKBP8Q14318 412 aa29.3■■■□□ 2.28
PUF60-203ENST00000453551 HNRNPUQ00839 825 aaKnown RBP eCLIP29.25■■■□□ 2.27
PUF60-203ENST00000453551 ROCK2O75116 1388 aaKnown RBP29.25■■■□□ 2.27
PUF60-203ENST00000453551 IQGAP3Q86VI3 1631 aa29.24■■■□□ 2.27
PUF60-203ENST00000453551 DHX29Q7Z478 1369 aaKnown RBP29.24■■■□□ 2.27
PUF60-203ENST00000453551 MAGI2Q86UL8 1455 aa29.23■■■□□ 2.27
PUF60-203ENST00000453551 ZCCHC11Q5TAX3 1644 aaKnown RBP29.22■■■□□ 2.27
PUF60-203ENST00000453551 PLCH2O75038 1416 aa29.22■■■□□ 2.27
PUF60-203ENST00000453551 DUOX2Q9NRD8 1548 aa29.22■■■□□ 2.27
PUF60-203ENST00000453551 ERBINQ96RT1 1412 aa29.18■■■□□ 2.26
PUF60-203ENST00000453551 ARAP3Q8WWN8 1544 aa29.18■■■□□ 2.26
PUF60-203ENST00000453551 ATP10AO60312 1499 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms