RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 ERICH6Q7L0X2 663 aa21.59■■□□□ 1.05
TRA2B-205ENST00000453386 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
TRA2B-205ENST00000453386 CDK13Q14004 1512 aaKnown RBP21.58■■□□□ 1.05
TRA2B-205ENST00000453386 MIA2Q96PC5 1412 aa21.58■■□□□ 1.05
TRA2B-205ENST00000453386 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
TRA2B-205ENST00000453386 BCL11AQ9H165 835 aa21.57■■□□□ 1.04
TRA2B-205ENST00000453386 CNGB1Q14028 1251 aaPredicted RBP21.56■■□□□ 1.04
TRA2B-205ENST00000453386 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
TRA2B-205ENST00000453386 ANKRD30BQ9BXX2 1392 aa21.54■■□□□ 1.04
TRA2B-205ENST00000453386 ZBED9Q6R2W3 1325 aa21.54■■□□□ 1.04
TRA2B-205ENST00000453386 KIF7Q2M1P5 1343 aa21.53■■□□□ 1.04
TRA2B-205ENST00000453386 KIF21AQ7Z4S6 1674 aa21.52■■□□□ 1.04
TRA2B-205ENST00000453386 ZNF644Q9H582 1327 aaPredicted RBP21.52■■□□□ 1.04
TRA2B-205ENST00000453386 DNAJC5BQ9UF47 199 aa21.52■■□□□ 1.04
TRA2B-205ENST00000453386 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
TRA2B-205ENST00000453386 RPRD2Q5VT52 1461 aaKnown RBP21.5■■□□□ 1.03
TRA2B-205ENST00000453386 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
TRA2B-205ENST00000453386 DAPK1P53355 1430 aa21.49■■□□□ 1.03
TRA2B-205ENST00000453386 ROCK1Q13464 1354 aa21.46■■□□□ 1.03
TRA2B-205ENST00000453386 ZNF326Q5BKZ1 582 aaKnown RBP21.46■■□□□ 1.03
TRA2B-205ENST00000453386 ABCC5O15440 1437 aa21.45■■□□□ 1.02
TRA2B-205ENST00000453386 TEX14Q8IWB6 1497 aa21.44■■□□□ 1.02
TRA2B-205ENST00000453386 WDR62O43379 1518 aa21.44■■□□□ 1.02
TRA2B-205ENST00000453386 TARBP1Q13395 1621 aaKnown RBP21.44■■□□□ 1.02
TRA2B-205ENST00000453386 SPATA31E1Q6ZUB1 1445 aa21.43■■□□□ 1.02
TRA2B-205ENST00000453386 SENP3-EIF4A1A0A087X0R7 540 aa21.37■■□□□ 1.01
TRA2B-205ENST00000453386 ZNF777Q9ULD5 760 aaPredicted RBP21.37■■□□□ 1.01
TRA2B-205ENST00000453386 CFDP1Q9UEE9 299 aaPredicted RBP21.36■■□□□ 1.01
TRA2B-205ENST00000453386 PBRM1Q86U86 1689 aa21.35■■□□□ 1.01
TRA2B-205ENST00000453386 ADAMTS12P58397 1594 aa21.34■■□□□ 1.01
TRA2B-205ENST00000453386 DNMT1P26358 1616 aaKnown RBP21.34■■□□□ 1.01
TRA2B-205ENST00000453386 USP47Q96K76 1375 aa21.33■■□□□ 1
TRA2B-205ENST00000453386 PKD2Q13563 968 aa21.32■■□□□ 1
TRA2B-205ENST00000453386 DHX29Q7Z478 1369 aaKnown RBP21.31■■□□□ 1
TRA2B-205ENST00000453386 NUDCQ9Y266 331 aa21.31■■□□□ 1
TRA2B-205ENST00000453386 NUP153P49790 1475 aaKnown RBP21.3■■□□□ 1
TRA2B-205ENST00000453386 SMG6Q86US8 1419 aaKnown RBP21.3■■□□□ 1
TRA2B-205ENST00000453386 PZPP20742 1482 aa21.3■■□□□ 1
TRA2B-205ENST00000453386 CCDC136Q96JN2 1154 aa21.29■■□□□ 1
TRA2B-205ENST00000453386 PRG4Q92954 1404 aaPredicted RBP21.28■■□□□ 1
TRA2B-205ENST00000453386 TMC1Q8TDI8 760 aa21.27■■□□□ 1
TRA2B-205ENST00000453386 KIAA1107Q9UPP5 1409 aa21.26■□□□□ 0.99
TRA2B-205ENST00000453386 DISP1Q96F81 1524 aa21.26■□□□□ 0.99
TRA2B-205ENST00000453386 KIAA0586Q9BVV6 1533 aa21.24■□□□□ 0.99
TRA2B-205ENST00000453386 CAMSAP2Q08AD1 1489 aa21.23■□□□□ 0.99
TRA2B-205ENST00000453386 KIAA0556O60303 1618 aa21.23■□□□□ 0.99
TRA2B-205ENST00000453386 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
TRA2B-205ENST00000453386 ZNF608Q9ULD9 1512 aaPredicted RBP21.22■□□□□ 0.99
TRA2B-205ENST00000453386 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
TRA2B-205ENST00000453386 POLR1AO95602 1720 aaPredicted RBP21.22■□□□□ 0.99
TRA2B-205ENST00000453386 NOP58Q9Y2X3 529 aaKnown RBP21.21■□□□□ 0.99
TRA2B-205ENST00000453386 TROQ12816 1431 aaPredicted RBP21.21■□□□□ 0.99
TRA2B-205ENST00000453386 KDM2AQ9Y2K7 1162 aa21.21■□□□□ 0.99
TRA2B-205ENST00000453386 RAPGEF6Q8TEU7 1601 aa21.2■□□□□ 0.99
TRA2B-205ENST00000453386 ARID4BQ4LE39 1312 aaPredicted RBP21.2■□□□□ 0.98
TRA2B-205ENST00000453386 ANKRD30AQ9BXX3 1397 aa21.2■□□□□ 0.98
TRA2B-205ENST00000453386 MBD5Q9P267 1494 aa21.2■□□□□ 0.98
TRA2B-205ENST00000453386 BCORL1Q5H9F3 1711 aa21.19■□□□□ 0.98
TRA2B-205ENST00000453386 MRC2Q9UBG0 1479 aa21.19■□□□□ 0.98
TRA2B-205ENST00000453386 RNF123Q5XPI4 1314 aa21.18■□□□□ 0.98
TRA2B-205ENST00000453386 GPATCH8Q9UKJ3 1502 aaKnown RBP21.17■□□□□ 0.98
TRA2B-205ENST00000453386 MYT1LQ9UL68 1186 aa21.17■□□□□ 0.98
TRA2B-205ENST00000453386 NUP155O75694 1391 aa21.17■□□□□ 0.98
TRA2B-205ENST00000453386 ANKRD50Q9ULJ7 1429 aa21.16■□□□□ 0.98
TRA2B-205ENST00000453386 PAK3O75914 559 aaPredicted RBP21.16■□□□□ 0.98
TRA2B-205ENST00000453386 NBR1Q14596 966 aa21.16■□□□□ 0.98
TRA2B-205ENST00000453386 ST20-MTHFSA0A0A6YYL1 179 aa21.15■□□□□ 0.98
TRA2B-205ENST00000453386 ROCK2O75116 1388 aaKnown RBP21.15■□□□□ 0.98
TRA2B-205ENST00000453386 PLB1Q6P1J6 1458 aa21.14■□□□□ 0.97
TRA2B-205ENST00000453386 ANP32AP39687 249 aaKnown RBP21.13■□□□□ 0.97
TRA2B-205ENST00000453386 DEKP35659 375 aaKnown RBP21.13■□□□□ 0.97
TRA2B-205ENST00000453386 FBLN2P98095 1184 aa21.13■□□□□ 0.97
TRA2B-205ENST00000453386 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
TRA2B-205ENST00000453386 KIF15Q9NS87 1388 aa21.12■□□□□ 0.97
TRA2B-205ENST00000453386 DCAF11Q8TEB1 546 aa21.12■□□□□ 0.97
TRA2B-205ENST00000453386 CHMP7Q8WUX9 453 aaPredicted RBP21.12■□□□□ 0.97
TRA2B-205ENST00000453386 KDM5CP41229 1560 aa21.11■□□□□ 0.97
TRA2B-205ENST00000453386 GRIN2AQ12879 1464 aa21.11■□□□□ 0.97
TRA2B-205ENST00000453386 SALL2Q9Y467 1007 aaPredicted RBP21.11■□□□□ 0.97
TRA2B-205ENST00000453386 KIF14Q15058 1648 aa21.11■□□□□ 0.97
TRA2B-205ENST00000453386 ADGRL2O95490 1459 aa21.11■□□□□ 0.97
TRA2B-205ENST00000453386 MYBBP1AQ9BQG0 1328 aaKnown RBP21.09■□□□□ 0.97
TRA2B-205ENST00000453386 PLEKHD1A6NEE1 506 aa21.09■□□□□ 0.97
TRA2B-205ENST00000453386 TSPY4P0CV99 314 aa21.09■□□□□ 0.97
TRA2B-205ENST00000453386 TSPY10P0CW01 314 aa21.09■□□□□ 0.97
TRA2B-205ENST00000453386 RALGAPBQ86X10 1494 aa21.08■□□□□ 0.96
TRA2B-205ENST00000453386 ADGBQ8N7X0 1667 aa21.08■□□□□ 0.96
TRA2B-205ENST00000453386 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
TRA2B-205ENST00000453386 RALBP1Q15311 655 aa21.07■□□□□ 0.96
TRA2B-205ENST00000453386 IPO9Q96P70 1041 aaKnown RBP21.07■□□□□ 0.96
TRA2B-205ENST00000453386 ITSN2Q9NZM3 1697 aa21.07■□□□□ 0.96
TRA2B-205ENST00000453386 BRD4O60885 1362 aaPredicted RBP21.05■□□□□ 0.96
TRA2B-205ENST00000453386 ZBTB47Q9UFB7 747 aaPredicted RBP21.05■□□□□ 0.96
TRA2B-205ENST00000453386 LRPPRCP42704 1394 aaKnown RBP21.03■□□□□ 0.96
TRA2B-205ENST00000453386 RRP1P56182 461 aaKnown RBP21.03■□□□□ 0.96
TRA2B-205ENST00000453386 C9orf84Q5VXU9 1444 aa21.03■□□□□ 0.96
TRA2B-205ENST00000453386 JPH4Q96JJ6 628 aa21.03■□□□□ 0.96
TRA2B-205ENST00000453386 EXOC6Q8TAG9 804 aa21.02■□□□□ 0.96
TRA2B-205ENST00000453386 HNRNPMP52272 730 aaKnown RBP eCLIP21.02■□□□□ 0.966e-8■■■■□ 22.7
TRA2B-205ENST00000453386 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms