RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 TONSLQ96HA7 1378 aa29.08■■■□□ 2.25
PDCD2-204ENST00000453163 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
PDCD2-204ENST00000453163 ABCC5O15440 1437 aa29.07■■■□□ 2.24
PDCD2-204ENST00000453163 CHD1O14646 1710 aa29.06■■■□□ 2.24
PDCD2-204ENST00000453163 DENND4BO75064 1496 aaPredicted RBP29.05■■■□□ 2.24
PDCD2-204ENST00000453163 TRIM52Q96A61 297 aa29.02■■■□□ 2.24
PDCD2-204ENST00000453163 ROCK1Q13464 1354 aa29.02■■■□□ 2.24
PDCD2-204ENST00000453163 GPATCH8Q9UKJ3 1502 aaKnown RBP29.01■■■□□ 2.24
PDCD2-204ENST00000453163 CAMSAP2Q08AD1 1489 aa29.01■■■□□ 2.24
PDCD2-204ENST00000453163 CFDP1Q9UEE9 299 aaPredicted RBP28.97■■■□□ 2.23
PDCD2-204ENST00000453163 ATP10BO94823 1461 aa28.97■■■□□ 2.23
PDCD2-204ENST00000453163 KDM5BQ9UGL1 1544 aa28.94■■■□□ 2.22
PDCD2-204ENST00000453163 CDC42BPAQ5VT25 1732 aa28.92■■■□□ 2.22
PDCD2-204ENST00000453163 MPHOSPH9Q99550 1183 aa28.92■■■□□ 2.22
PDCD2-204ENST00000453163 PLEKHD1A6NEE1 506 aa28.9■■■□□ 2.22
PDCD2-204ENST00000453163 CROCC2H7BZ55 1655 aa28.9■■■□□ 2.22
PDCD2-204ENST00000453163 ZNF777Q9ULD5 760 aaPredicted RBP28.9■■■□□ 2.22
PDCD2-204ENST00000453163 ADGBQ8N7X0 1667 aa28.9■■■□□ 2.22
PDCD2-204ENST00000453163 PTPRGP23470 1445 aa28.9■■■□□ 2.22
PDCD2-204ENST00000453163 HIRIP3Q9BW71 556 aaPredicted RBP28.89■■■□□ 2.22
PDCD2-204ENST00000453163 ABCC10Q5T3U5 1492 aa28.87■■■□□ 2.21
PDCD2-204ENST00000453163 SHROOM2Q13796 1616 aa28.85■■■□□ 2.21
PDCD2-204ENST00000453163 FOXD1Q16676 465 aa28.84■■■□□ 2.21
PDCD2-204ENST00000453163 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
PDCD2-204ENST00000453163 NCOA1Q15788 1441 aa28.82■■■□□ 2.2
PDCD2-204ENST00000453163 ADGRL2O95490 1459 aa28.8■■■□□ 2.2
PDCD2-204ENST00000453163 MYT1Q01538 1121 aa28.79■■■□□ 2.2
PDCD2-204ENST00000453163 ERCC6L2Q5T890 1561 aa28.76■■■□□ 2.19
PDCD2-204ENST00000453163 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
PDCD2-204ENST00000453163 SLC4A1APQ9BWU0 796 aaKnown RBP28.72■■■□□ 2.19
PDCD2-204ENST00000453163 PZPP20742 1482 aa28.71■■■□□ 2.19
PDCD2-204ENST00000453163 ANKRD30AQ9BXX3 1397 aa28.71■■■□□ 2.19
PDCD2-204ENST00000453163 RPRD2Q5VT52 1461 aaKnown RBP28.69■■■□□ 2.18
PDCD2-204ENST00000453163 SHANK2Q9UPX8 1470 aa28.68■■■□□ 2.18
PDCD2-204ENST00000453163 CDC42BPBQ9Y5S2 1711 aa28.67■■■□□ 2.18
PDCD2-204ENST00000453163 C9orf84Q5VXU9 1444 aa28.67■■■□□ 2.18
PDCD2-204ENST00000453163 L3MBTL2Q969R5 705 aa28.66■■■□□ 2.18
PDCD2-204ENST00000453163 PREX2Q70Z35 1606 aa28.66■■■□□ 2.18
PDCD2-204ENST00000453163 KCNH8Q96L42 1107 aa28.64■■■□□ 2.18
PDCD2-204ENST00000453163 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.17
PDCD2-204ENST00000453163 ABCC2Q92887 1545 aa28.62■■■□□ 2.17
PDCD2-204ENST00000453163 SAMD9LQ8IVG5 1584 aa28.62■■■□□ 2.17
PDCD2-204ENST00000453163 TEX14Q8IWB6 1497 aa28.62■■■□□ 2.17
PDCD2-204ENST00000453163 ARHGEF5Q12774 1597 aa28.61■■■□□ 2.17
PDCD2-204ENST00000453163 CLASP1Q7Z460 1538 aa28.61■■■□□ 2.17
PDCD2-204ENST00000453163 TTC37Q6PGP7 1564 aa28.6■■■□□ 2.17
PDCD2-204ENST00000453163 HNRNPMP52272 730 aaKnown RBP eCLIP28.59■■■□□ 2.17
PDCD2-204ENST00000453163 MBD5Q9P267 1494 aa28.59■■■□□ 2.17
PDCD2-204ENST00000453163 TSPY4P0CV99 314 aa28.56■■■□□ 2.16
PDCD2-204ENST00000453163 TSPY10P0CW01 314 aa28.56■■■□□ 2.16
PDCD2-204ENST00000453163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.55■■■□□ 2.161e-6■■□□□ 13.9
PDCD2-204ENST00000453163 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
PDCD2-204ENST00000453163 HSPA5P11021 654 aaKnown RBP28.54■■■□□ 2.16
PDCD2-204ENST00000453163 CCDC141Q6ZP82 1450 aa28.52■■■□□ 2.16
PDCD2-204ENST00000453163 KIF15Q9NS87 1388 aa28.51■■■□□ 2.15
PDCD2-204ENST00000453163 PKD2Q13563 968 aa28.5■■■□□ 2.15
PDCD2-204ENST00000453163 ARHGAP5Q13017 1502 aa28.5■■■□□ 2.15
PDCD2-204ENST00000453163 NBPF8Q3BBV2 869 aa28.49■■■□□ 2.15
PDCD2-204ENST00000453163 SYCP2Q9BX26 1530 aa28.49■■■□□ 2.15
PDCD2-204ENST00000453163 MYO5CQ9NQX4 1742 aa28.49■■■□□ 2.15
PDCD2-204ENST00000453163 EIF4G2P78344 907 aaKnown RBP eCLIP28.48■■■□□ 2.15
PDCD2-204ENST00000453163 ANP32CO43423 234 aa28.47■■■□□ 2.15
PDCD2-204ENST00000453163 NUP155O75694 1391 aa28.47■■■□□ 2.15
PDCD2-204ENST00000453163 ZCCHC11Q5TAX3 1644 aaKnown RBP28.47■■■□□ 2.15
PDCD2-204ENST00000453163 KDM5DQ9BY66 1539 aa28.45■■■□□ 2.15
PDCD2-204ENST00000453163 WASHC2AQ641Q2 1341 aa28.45■■■□□ 2.14
PDCD2-204ENST00000453163 UHRF1BP1LA0JNW5 1464 aa28.4■■■□□ 2.14
PDCD2-204ENST00000453163 CCER2I3L3R5 266 aa28.39■■■□□ 2.14
PDCD2-204ENST00000453163 RSPH4AQ5TD94 716 aa28.39■■■□□ 2.14
PDCD2-204ENST00000453163 MAST1Q9Y2H9 1570 aa28.37■■■□□ 2.13
PDCD2-204ENST00000453163 PLEKHH2Q8IVE3 1493 aa28.31■■■□□ 2.12
PDCD2-204ENST00000453163 SPATA31E1Q6ZUB1 1445 aa28.31■■■□□ 2.12
PDCD2-204ENST00000453163 C11orf95C9JLR9 678 aaPredicted RBP28.31■■■□□ 2.12
PDCD2-204ENST00000453163 FAM135AQ9P2D6 1515 aa28.31■■■□□ 2.12
PDCD2-204ENST00000453163 ARHGEF12Q9NZN5 1544 aa28.3■■■□□ 2.12
PDCD2-204ENST00000453163 PLCH2O75038 1416 aa28.29■■■□□ 2.12
PDCD2-204ENST00000453163 PLXNC1O60486 1568 aa28.29■■■□□ 2.12
PDCD2-204ENST00000453163 CCDC7Q96M83 1385 aa28.28■■■□□ 2.12
PDCD2-204ENST00000453163 POLR1AO95602 1720 aaPredicted RBP28.28■■■□□ 2.12
PDCD2-204ENST00000453163 ZNF326Q5BKZ1 582 aaKnown RBP28.26■■■□□ 2.11
PDCD2-204ENST00000453163 UNC13BO14795 1591 aa28.26■■■□□ 2.11
PDCD2-204ENST00000453163 CNTLNQ9NXG0 1405 aa28.26■■■□□ 2.11
PDCD2-204ENST00000453163 ABCC1P33527 1531 aa28.22■■■□□ 2.11
PDCD2-204ENST00000453163 EFCAB2Q5VUJ9 269 aa28.19■■■□□ 2.1
PDCD2-204ENST00000453163 UHRF1BP1Q6BDS2 1440 aa28.19■■■□□ 2.1
PDCD2-204ENST00000453163 KIF7Q2M1P5 1343 aa28.17■■■□□ 2.1
PDCD2-204ENST00000453163 DUOX2Q9NRD8 1548 aa28.17■■■□□ 2.1
PDCD2-204ENST00000453163 KDM5CP41229 1560 aa28.16■■■□□ 2.1
PDCD2-204ENST00000453163 USP47Q96K76 1375 aa28.16■■■□□ 2.1
PDCD2-204ENST00000453163 IQGAP3Q86VI3 1631 aa28.15■■■□□ 2.1
PDCD2-204ENST00000453163 TRAPPC8Q9Y2L5 1435 aa28.15■■■□□ 2.1
PDCD2-204ENST00000453163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.15■■■□□ 2.1
PDCD2-204ENST00000453163 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
PDCD2-204ENST00000453163 BCORL1Q5H9F3 1711 aa28.14■■■□□ 2.09
PDCD2-204ENST00000453163 WDR7Q9Y4E6 1490 aa28.12■■■□□ 2.09
PDCD2-204ENST00000453163 ERBINQ96RT1 1412 aa28.11■■■□□ 2.09
PDCD2-204ENST00000453163 ARAP3Q8WWN8 1544 aa28.1■■■□□ 2.09
PDCD2-204ENST00000453163 KDM2AQ9Y2K7 1162 aa28.09■■■□□ 2.09
PDCD2-204ENST00000453163 SUPT16HQ9Y5B9 1047 aaKnown RBP28.09■■■□□ 2.09
PDCD2-204ENST00000453163 CCDC144AA2RUR9 1427 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms