RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 EFCAB2Q5VUJ9 269 aa19.39■□□□□ 0.69
HERC3-207ENST00000452979 ARHGAP35Q9NRY4 1499 aa19.39■□□□□ 0.69
HERC3-207ENST00000452979 FER1L4A9Z1Z3 1794 aa19.38■□□□□ 0.69
HERC3-207ENST00000452979 UBTFP17480 764 aaKnown RBP19.38■□□□□ 0.69
HERC3-207ENST00000452979 CDK11AQ9UQ88 783 aaPredicted RBP19.38■□□□□ 0.69
HERC3-207ENST00000452979 ATP10AO60312 1499 aa19.37■□□□□ 0.69
HERC3-207ENST00000452979 HSPA2P54652 639 aa19.35■□□□□ 0.69
HERC3-207ENST00000452979 ATP1B4Q9UN42 357 aaPredicted RBP19.35■□□□□ 0.69
HERC3-207ENST00000452979 ARHGEF12Q9NZN5 1544 aa19.35■□□□□ 0.69
HERC3-207ENST00000452979 KIF14Q15058 1648 aa19.34■□□□□ 0.69
HERC3-207ENST00000452979 C9orf84Q5VXU9 1444 aa19.34■□□□□ 0.69
HERC3-207ENST00000452979 MLECQ14165 292 aa19.33■□□□□ 0.68
HERC3-207ENST00000452979 PLPPR3Q6T4P5 718 aa19.32■□□□□ 0.68
HERC3-207ENST00000452979 TROQ12816 1431 aaPredicted RBP19.32■□□□□ 0.68
HERC3-207ENST00000452979 LRRIQ1Q96JM4 1722 aa19.31■□□□□ 0.68
HERC3-207ENST00000452979 ZNF518AQ6AHZ1 1483 aa19.3■□□□□ 0.68
HERC3-207ENST00000452979 KDM5CP41229 1560 aa19.3■□□□□ 0.68
HERC3-207ENST00000452979 EHMT2Q96KQ7 1210 aa19.29■□□□□ 0.68
HERC3-207ENST00000452979 ARHGAP5Q13017 1502 aa19.28■□□□□ 0.68
HERC3-207ENST00000452979 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.68
HERC3-207ENST00000452979 CLIP1P30622 1438 aa19.27■□□□□ 0.68
HERC3-207ENST00000452979 AFAP1Q8N556 730 aa19.27■□□□□ 0.68
HERC3-207ENST00000452979 CDC42BPBQ9Y5S2 1711 aa19.27■□□□□ 0.68
HERC3-207ENST00000452979 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
HERC3-207ENST00000452979 REREQ9P2R6 1566 aa19.25■□□□□ 0.67
HERC3-207ENST00000452979 MLH3Q9UHC1 1453 aa19.23■□□□□ 0.67
HERC3-207ENST00000452979 CERKQ8TCT0 537 aa19.23■□□□□ 0.67
HERC3-207ENST00000452979 DIP2CQ9Y2E4 1556 aa19.23■□□□□ 0.67
HERC3-207ENST00000452979 CEBPAP49715 358 aaPredicted RBP19.22■□□□□ 0.67
HERC3-207ENST00000452979 SETD1BQ9UPS6 1966 aaKnown RBP19.21■□□□□ 0.67
HERC3-207ENST00000452979 PREX2Q70Z35 1606 aa19.21■□□□□ 0.67
HERC3-207ENST00000452979 CASKIN1Q8WXD9 1431 aa19.2■□□□□ 0.66
HERC3-207ENST00000452979 ABCA6Q8N139 1617 aa19.19■□□□□ 0.66
HERC3-207ENST00000452979 CCDC18Q5T9S5 1454 aa19.19■□□□□ 0.66
HERC3-207ENST00000452979 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
HERC3-207ENST00000452979 AGLP35573 1532 aa19.18■□□□□ 0.66
HERC3-207ENST00000452979 ABCC1P33527 1531 aa19.17■□□□□ 0.66
HERC3-207ENST00000452979 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
HERC3-207ENST00000452979 DMRT2Q9Y5R5 561 aa19.17■□□□□ 0.66
HERC3-207ENST00000452979 ITSN2Q9NZM3 1697 aa19.17■□□□□ 0.66
HERC3-207ENST00000452979 TRAPPC8Q9Y2L5 1435 aa19.17■□□□□ 0.66
HERC3-207ENST00000452979 C3P01024 1663 aa19.15■□□□□ 0.66
HERC3-207ENST00000452979 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
HERC3-207ENST00000452979 UHRF1BP1Q6BDS2 1440 aa19.14■□□□□ 0.65
HERC3-207ENST00000452979 KIDINS220Q9ULH0 1771 aa19.14■□□□□ 0.65
HERC3-207ENST00000452979 FYCO1Q9BQS8 1478 aa19.09■□□□□ 0.65
HERC3-207ENST00000452979 PTPRTO14522 1441 aa19.08■□□□□ 0.64
HERC3-207ENST00000452979 CNTLNQ9NXG0 1405 aa19.08■□□□□ 0.64
HERC3-207ENST00000452979 ESF1Q9H501 851 aaKnown RBP19.07■□□□□ 0.64
HERC3-207ENST00000452979 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
HERC3-207ENST00000452979 GPATCH8Q9UKJ3 1502 aaKnown RBP19.05■□□□□ 0.64
HERC3-207ENST00000452979 MROH2AA6NES4 1674 aa19.04■□□□□ 0.64
HERC3-207ENST00000452979 KIAA1107Q9UPP5 1409 aa19.01■□□□□ 0.63
HERC3-207ENST00000452979 ZNF777Q9ULD5 760 aaPredicted RBP19.01■□□□□ 0.63
HERC3-207ENST00000452979 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
HERC3-207ENST00000452979 NPATQ14207 1427 aa19■□□□□ 0.63
HERC3-207ENST00000452979 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
HERC3-207ENST00000452979 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
HERC3-207ENST00000452979 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
HERC3-207ENST00000452979 NCOA1Q15788 1441 aa18.99■□□□□ 0.63
HERC3-207ENST00000452979 PLEKHH2Q8IVE3 1493 aa18.98■□□□□ 0.63
HERC3-207ENST00000452979 ZMYM3Q14202 1370 aa18.98■□□□□ 0.63
HERC3-207ENST00000452979 LTBP4Q8N2S1 1624 aa18.98■□□□□ 0.63
HERC3-207ENST00000452979 ATP7AQ04656 1500 aa18.97■□□□□ 0.63
HERC3-207ENST00000452979 PLXNC1O60486 1568 aa18.97■□□□□ 0.63
HERC3-207ENST00000452979 INO80Q9ULG1 1556 aaPredicted RBP18.97■□□□□ 0.63
HERC3-207ENST00000452979 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
HERC3-207ENST00000452979 IQSEC2Q5JU85 1478 aa18.95■□□□□ 0.62
HERC3-207ENST00000452979 CAMSAP1Q5T5Y3 1602 aa18.94■□□□□ 0.62
HERC3-207ENST00000452979 A2MP01023 1474 aa18.94■□□□□ 0.62
HERC3-207ENST00000452979 CLTCQ00610 1675 aaKnown RBP18.94■□□□□ 0.62
HERC3-207ENST00000452979 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
HERC3-207ENST00000452979 PPP6R1Q9UPN7 881 aa18.91■□□□□ 0.62
HERC3-207ENST00000452979 ADGBQ8N7X0 1667 aa18.91■□□□□ 0.62
HERC3-207ENST00000452979 ZNF142P52746 1687 aaPredicted RBP18.89■□□□□ 0.61
HERC3-207ENST00000452979 MTUS2Q5JR59 1369 aa18.89■□□□□ 0.61
HERC3-207ENST00000452979 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
HERC3-207ENST00000452979 MYO3AQ8NEV4 1616 aa18.88■□□□□ 0.61
HERC3-207ENST00000452979 MBD5Q9P267 1494 aa18.87■□□□□ 0.61
HERC3-207ENST00000452979 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
HERC3-207ENST00000452979 PLA2R1Q13018 1463 aa18.86■□□□□ 0.61
HERC3-207ENST00000452979 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
HERC3-207ENST00000452979 NCKAP5LQ9HCH0 1330 aa18.86■□□□□ 0.61
HERC3-207ENST00000452979 PKD2Q13563 968 aa18.86■□□□□ 0.61
HERC3-207ENST00000452979 GGT6Q6P531 493 aa18.86■□□□□ 0.61
HERC3-207ENST00000452979 CEP170BQ9Y4F5 1589 aaPredicted RBP18.85■□□□□ 0.61
HERC3-207ENST00000452979 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
HERC3-207ENST00000452979 ZNF644Q9H582 1327 aaPredicted RBP18.85■□□□□ 0.61
HERC3-207ENST00000452979 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
HERC3-207ENST00000452979 TCOF1Q13428 1488 aaKnown RBP18.84■□□□□ 0.61
HERC3-207ENST00000452979 ILDR2Q71H61 639 aa18.83■□□□□ 0.6
HERC3-207ENST00000452979 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
HERC3-207ENST00000452979 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
HERC3-207ENST00000452979 ZNF335Q9H4Z2 1342 aaPredicted RBP18.8■□□□□ 0.6
HERC3-207ENST00000452979 SOCS7O14512 581 aa18.78■□□□□ 0.6
HERC3-207ENST00000452979 DNMT1P26358 1616 aaKnown RBP18.78■□□□□ 0.6
HERC3-207ENST00000452979 A2ML1A8K2U0 1454 aa18.77■□□□□ 0.6
HERC3-207ENST00000452979 SPATA31D1Q6ZQQ2 1576 aa18.77■□□□□ 0.6
HERC3-207ENST00000452979 RSPH4AQ5TD94 716 aa18.77■□□□□ 0.6
HERC3-207ENST00000452979 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms