RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 ILDR1Q86SU0 546 aaPredicted RBP18.06■□□□□ 0.48
USP1-204ENST00000452143 RIMS1Q86UR5 1692 aaKnown RBP18.05■□□□□ 0.48
USP1-204ENST00000452143 PLCH2O75038 1416 aa18.05■□□□□ 0.48
USP1-204ENST00000452143 KIF14Q15058 1648 aa18.05■□□□□ 0.48
USP1-204ENST00000452143 UBTFP17480 764 aaKnown RBP18.04■□□□□ 0.48
USP1-204ENST00000452143 POGZQ7Z3K3 1410 aa18.04■□□□□ 0.48
USP1-204ENST00000452143 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
USP1-204ENST00000452143 ARID4BQ4LE39 1312 aaPredicted RBP18.03■□□□□ 0.48
USP1-204ENST00000452143 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.48
USP1-204ENST00000452143 LRRIQ1Q96JM4 1722 aa18.01■□□□□ 0.47
USP1-204ENST00000452143 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
USP1-204ENST00000452143 YEATS2Q9ULM3 1422 aa17.99■□□□□ 0.47
USP1-204ENST00000452143 LMTK3Q96Q04 1460 aa17.99■□□□□ 0.47
USP1-204ENST00000452143 FER1L4A9Z1Z3 1794 aa17.99■□□□□ 0.47
USP1-204ENST00000452143 TROQ12816 1431 aaPredicted RBP17.98■□□□□ 0.47
USP1-204ENST00000452143 SCAPERQ9BY12 1400 aa17.98■□□□□ 0.47
USP1-204ENST00000452143 CLIP1P30622 1438 aa17.98■□□□□ 0.47
USP1-204ENST00000452143 KDM5CP41229 1560 aa17.95■□□□□ 0.46
USP1-204ENST00000452143 ZNF518AQ6AHZ1 1483 aa17.95■□□□□ 0.46
USP1-204ENST00000452143 ARHGAP5Q13017 1502 aa17.94■□□□□ 0.46
USP1-204ENST00000452143 EHMT2Q96KQ7 1210 aa17.94■□□□□ 0.46
USP1-204ENST00000452143 ATP1B4Q9UN42 357 aaPredicted RBP17.94■□□□□ 0.46
USP1-204ENST00000452143 CCDC18Q5T9S5 1454 aa17.94■□□□□ 0.46
USP1-204ENST00000452143 C9orf84Q5VXU9 1444 aa17.93■□□□□ 0.46
USP1-204ENST00000452143 EFCAB2Q5VUJ9 269 aa17.93■□□□□ 0.46
USP1-204ENST00000452143 PREX2Q70Z35 1606 aa17.93■□□□□ 0.46
USP1-204ENST00000452143 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
USP1-204ENST00000452143 ATP10AO60312 1499 aa17.92■□□□□ 0.46
USP1-204ENST00000452143 ARHGEF12Q9NZN5 1544 aa17.92■□□□□ 0.46
USP1-204ENST00000452143 CASKIN1Q8WXD9 1431 aa17.9■□□□□ 0.46
USP1-204ENST00000452143 REREQ9P2R6 1566 aa17.89■□□□□ 0.45
USP1-204ENST00000452143 FYCO1Q9BQS8 1478 aa17.88■□□□□ 0.45
USP1-204ENST00000452143 ABCC1P33527 1531 aa17.87■□□□□ 0.45
USP1-204ENST00000452143 DIP2CQ9Y2E4 1556 aa17.87■□□□□ 0.45
USP1-204ENST00000452143 PREX1Q8TCU6 1659 aa17.86■□□□□ 0.45
USP1-204ENST00000452143 ITSN2Q9NZM3 1697 aa17.86■□□□□ 0.45
USP1-204ENST00000452143 CDC42BPAQ5VT25 1732 aa17.85■□□□□ 0.45
USP1-204ENST00000452143 ABCA6Q8N139 1617 aa17.84■□□□□ 0.45
USP1-204ENST00000452143 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.45
USP1-204ENST00000452143 MLECQ14165 292 aa17.82■□□□□ 0.44
USP1-204ENST00000452143 FBXO41Q8TF61 875 aa17.82■□□□□ 0.44
USP1-204ENST00000452143 AGLP35573 1532 aa17.79■□□□□ 0.44
USP1-204ENST00000452143 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
USP1-204ENST00000452143 KIDINS220Q9ULH0 1771 aa17.77■□□□□ 0.44
USP1-204ENST00000452143 TRAPPC8Q9Y2L5 1435 aa17.76■□□□□ 0.43
USP1-204ENST00000452143 HSPA2P54652 639 aa17.76■□□□□ 0.43
USP1-204ENST00000452143 SETD1BQ9UPS6 1966 aaKnown RBP17.75■□□□□ 0.43
USP1-204ENST00000452143 SAMD9LQ8IVG5 1584 aa17.74■□□□□ 0.43
USP1-204ENST00000452143 C3P01024 1663 aa17.74■□□□□ 0.43
USP1-204ENST00000452143 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
USP1-204ENST00000452143 SYCP2Q9BX26 1530 aa17.72■□□□□ 0.43
USP1-204ENST00000452143 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
USP1-204ENST00000452143 UHRF1BP1Q6BDS2 1440 aa17.71■□□□□ 0.43
USP1-204ENST00000452143 PLEKHH2Q8IVE3 1493 aa17.69■□□□□ 0.42
USP1-204ENST00000452143 MROH2AA6NES4 1674 aa17.69■□□□□ 0.42
USP1-204ENST00000452143 INO80Q9ULG1 1556 aaPredicted RBP17.69■□□□□ 0.42
USP1-204ENST00000452143 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
USP1-204ENST00000452143 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
USP1-204ENST00000452143 CEBPAP49715 358 aaPredicted RBP17.67■□□□□ 0.42
USP1-204ENST00000452143 ATP7AQ04656 1500 aa17.67■□□□□ 0.42
USP1-204ENST00000452143 KIAA1107Q9UPP5 1409 aa17.66■□□□□ 0.42
USP1-204ENST00000452143 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
USP1-204ENST00000452143 EHBP1L1Q8N3D4 1523 aa17.65■□□□□ 0.42
USP1-204ENST00000452143 ESF1Q9H501 851 aaKnown RBP17.64■□□□□ 0.41
USP1-204ENST00000452143 SUPT6HQ7KZ85 1726 aaKnown RBP17.64■□□□□ 0.41
USP1-204ENST00000452143 MTUS2Q5JR59 1369 aa17.63■□□□□ 0.41
USP1-204ENST00000452143 CCNB3Q8WWL7 1395 aa17.63■□□□□ 0.41
USP1-204ENST00000452143 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
USP1-204ENST00000452143 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
USP1-204ENST00000452143 DMRT2Q9Y5R5 561 aa17.62■□□□□ 0.41
USP1-204ENST00000452143 ADGBQ8N7X0 1667 aa17.61■□□□□ 0.41
USP1-204ENST00000452143 SPAG9O60271 1321 aaKnown RBP17.61■□□□□ 0.41
USP1-204ENST00000452143 CERKQ8TCT0 537 aa17.6■□□□□ 0.41
USP1-204ENST00000452143 CFDP1Q9UEE9 299 aaPredicted RBP17.6■□□□□ 0.41
USP1-204ENST00000452143 NPATQ14207 1427 aa17.6■□□□□ 0.41
USP1-204ENST00000452143 A2MP01023 1474 aa17.58■□□□□ 0.41
USP1-204ENST00000452143 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.4
USP1-204ENST00000452143 PTPRTO14522 1441 aa17.57■□□□□ 0.4
USP1-204ENST00000452143 CEP162Q5TB80 1403 aa17.57■□□□□ 0.4
USP1-204ENST00000452143 ZNF142P52746 1687 aaPredicted RBP17.57■□□□□ 0.4
USP1-204ENST00000452143 HNRNPMP52272 730 aaKnown RBP eCLIP17.56■□□□□ 0.42e-9■■■■■ 36.1
USP1-204ENST00000452143 NCOA1Q15788 1441 aa17.55■□□□□ 0.4
USP1-204ENST00000452143 MYO3AQ8NEV4 1616 aa17.54■□□□□ 0.4
USP1-204ENST00000452143 MBD5Q9P267 1494 aa17.53■□□□□ 0.4
USP1-204ENST00000452143 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
USP1-204ENST00000452143 RTEL1-TNFRSF6BF6WH68 1400 aa17.52■□□□□ 0.4
USP1-204ENST00000452143 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
USP1-204ENST00000452143 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
USP1-204ENST00000452143 FAM135AQ9P2D6 1515 aa17.49■□□□□ 0.39
USP1-204ENST00000452143 CAMSAP2Q08AD1 1489 aa17.48■□□□□ 0.39
USP1-204ENST00000452143 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
USP1-204ENST00000452143 NCOA2Q15596 1464 aa17.48■□□□□ 0.39
USP1-204ENST00000452143 IQSEC2Q5JU85 1478 aa17.48■□□□□ 0.39
USP1-204ENST00000452143 CCDC141Q6ZP82 1450 aa17.48■□□□□ 0.39
USP1-204ENST00000452143 PTPRKQ15262 1439 aa17.47■□□□□ 0.39
USP1-204ENST00000452143 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
USP1-204ENST00000452143 ZNF644Q9H582 1327 aaPredicted RBP17.47■□□□□ 0.39
USP1-204ENST00000452143 ARHGEF5Q12774 1597 aa17.45■□□□□ 0.38
USP1-204ENST00000452143 DHX29Q7Z478 1369 aaKnown RBP17.43■□□□□ 0.38
USP1-204ENST00000452143 KDM5DQ9BY66 1539 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms