RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 REREQ9P2R6 1566 aa11.13□□□□□ -0.63
PMS1-217ENST00000450931 ATP10AO60312 1499 aa11.12□□□□□ -0.63
PMS1-217ENST00000450931 KDM5CP41229 1560 aa11.11□□□□□ -0.63
PMS1-217ENST00000450931 CDK13Q14004 1512 aaKnown RBP11.11□□□□□ -0.63
PMS1-217ENST00000450931 SCAPERQ9BY12 1400 aa11.11□□□□□ -0.63
PMS1-217ENST00000450931 KIF14Q15058 1648 aa11.1□□□□□ -0.63
PMS1-217ENST00000450931 ZNF518AQ6AHZ1 1483 aa11.1□□□□□ -0.63
PMS1-217ENST00000450931 FMN1Q68DA7 1419 aa11.09□□□□□ -0.63
PMS1-217ENST00000450931 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
PMS1-217ENST00000450931 HSPA2P54652 639 aa11.07□□□□□ -0.64
PMS1-217ENST00000450931 DIP2CQ9Y2E4 1556 aa11.06□□□□□ -0.64
PMS1-217ENST00000450931 EFCAB2Q5VUJ9 269 aa11.06□□□□□ -0.64
PMS1-217ENST00000450931 STRCQ7RTU9 1775 aa11.06□□□□□ -0.64
PMS1-217ENST00000450931 DMRT2Q9Y5R5 561 aa11.05□□□□□ -0.64
PMS1-217ENST00000450931 AGLP35573 1532 aa11.05□□□□□ -0.64
PMS1-217ENST00000450931 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
PMS1-217ENST00000450931 CLIP1P30622 1438 aa11.04□□□□□ -0.64
PMS1-217ENST00000450931 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
PMS1-217ENST00000450931 UHRF1BP1Q6BDS2 1440 aa11.04□□□□□ -0.64
PMS1-217ENST00000450931 IQSEC2Q5JU85 1478 aa11.04□□□□□ -0.64
PMS1-217ENST00000450931 MLH3Q9UHC1 1453 aa11.04□□□□□ -0.64
PMS1-217ENST00000450931 ARHGAP5Q13017 1502 aa11.03□□□□□ -0.64
PMS1-217ENST00000450931 PTPRTO14522 1441 aa11.03□□□□□ -0.64
PMS1-217ENST00000450931 PREX2Q70Z35 1606 aa11.03□□□□□ -0.64
PMS1-217ENST00000450931 ABCA6Q8N139 1617 aa11.03□□□□□ -0.64
PMS1-217ENST00000450931 C3P01024 1663 aa11.02□□□□□ -0.64
PMS1-217ENST00000450931 ITSN2Q9NZM3 1697 aa11.02□□□□□ -0.65
PMS1-217ENST00000450931 ARHGAP35Q9NRY4 1499 aa11.02□□□□□ -0.65
PMS1-217ENST00000450931 ABCC1P33527 1531 aa11.01□□□□□ -0.65
PMS1-217ENST00000450931 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
PMS1-217ENST00000450931 MLECQ14165 292 aa11.01□□□□□ -0.65
PMS1-217ENST00000450931 CDC42BPBQ9Y5S2 1711 aa11.01□□□□□ -0.65
PMS1-217ENST00000450931 MROH2AA6NES4 1674 aa11.01□□□□□ -0.65
PMS1-217ENST00000450931 LRRIQ1Q96JM4 1722 aa11□□□□□ -0.65
PMS1-217ENST00000450931 CNTLNQ9NXG0 1405 aa11□□□□□ -0.65
PMS1-217ENST00000450931 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
PMS1-217ENST00000450931 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
PMS1-217ENST00000450931 PLPPR3Q6T4P5 718 aa10.98□□□□□ -0.65
PMS1-217ENST00000450931 TRAPPC8Q9Y2L5 1435 aa10.97□□□□□ -0.65
PMS1-217ENST00000450931 LTBP4Q8N2S1 1624 aa10.97□□□□□ -0.65
PMS1-217ENST00000450931 SPATA31D1Q6ZQQ2 1576 aa10.96□□□□□ -0.65
PMS1-217ENST00000450931 KIDINS220Q9ULH0 1771 aa10.96□□□□□ -0.65
PMS1-217ENST00000450931 NPATQ14207 1427 aa10.96□□□□□ -0.65
PMS1-217ENST00000450931 NCOA1Q15788 1441 aa10.95□□□□□ -0.66
PMS1-217ENST00000450931 CDC42BPAQ5VT25 1732 aa10.95□□□□□ -0.66
PMS1-217ENST00000450931 CEBPAP49715 358 aaPredicted RBP10.94□□□□□ -0.66
PMS1-217ENST00000450931 CASKIN1Q8WXD9 1431 aa10.94□□□□□ -0.66
PMS1-217ENST00000450931 ZNF142P52746 1687 aaPredicted RBP10.94□□□□□ -0.66
PMS1-217ENST00000450931 AFAP1Q8N556 730 aa10.94□□□□□ -0.66
PMS1-217ENST00000450931 DISP3Q9P2K9 1392 aa10.93□□□□□ -0.66
PMS1-217ENST00000450931 SAMD9LQ8IVG5 1584 aa10.93□□□□□ -0.66
PMS1-217ENST00000450931 SOCS7O14512 581 aa10.92□□□□□ -0.66
PMS1-217ENST00000450931 ESF1Q9H501 851 aaKnown RBP10.92□□□□□ -0.66
PMS1-217ENST00000450931 PLXNC1O60486 1568 aa10.91□□□□□ -0.66
PMS1-217ENST00000450931 UBTFP17480 764 aaKnown RBP10.91□□□□□ -0.66
PMS1-217ENST00000450931 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
PMS1-217ENST00000450931 FYCO1Q9BQS8 1478 aa10.91□□□□□ -0.66
PMS1-217ENST00000450931 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
PMS1-217ENST00000450931 INO80Q9ULG1 1556 aaPredicted RBP10.91□□□□□ -0.66
PMS1-217ENST00000450931 CAMSAP1Q5T5Y3 1602 aa10.9□□□□□ -0.66
PMS1-217ENST00000450931 PLEKHH2Q8IVE3 1493 aa10.9□□□□□ -0.66
PMS1-217ENST00000450931 MYO3AQ8NEV4 1616 aa10.9□□□□□ -0.66
PMS1-217ENST00000450931 MYT1LQ9UL68 1186 aa10.9□□□□□ -0.66
PMS1-217ENST00000450931 ATP7AQ04656 1500 aa10.89□□□□□ -0.67
PMS1-217ENST00000450931 KIAA1107Q9UPP5 1409 aa10.88□□□□□ -0.67
PMS1-217ENST00000450931 SYCP2Q9BX26 1530 aa10.88□□□□□ -0.67
PMS1-217ENST00000450931 CLTCQ00610 1675 aaKnown RBP10.87□□□□□ -0.67
PMS1-217ENST00000450931 ADGBQ8N7X0 1667 aa10.87□□□□□ -0.67
PMS1-217ENST00000450931 CEP170BQ9Y4F5 1589 aaPredicted RBP10.87□□□□□ -0.67
PMS1-217ENST00000450931 SUPT6HQ7KZ85 1726 aaKnown RBP10.87□□□□□ -0.67
PMS1-217ENST00000450931 FAM135AQ9P2D6 1515 aa10.86□□□□□ -0.67
PMS1-217ENST00000450931 ILDR2Q71H61 639 aa10.86□□□□□ -0.67
PMS1-217ENST00000450931 TCOF1Q13428 1488 aaKnown RBP10.86□□□□□ -0.67
PMS1-217ENST00000450931 GPATCH8Q9UKJ3 1502 aaKnown RBP10.86□□□□□ -0.67
PMS1-217ENST00000450931 ZMYM3Q14202 1370 aa10.85□□□□□ -0.67
PMS1-217ENST00000450931 A2MP01023 1474 aa10.85□□□□□ -0.67
PMS1-217ENST00000450931 PKD2Q13563 968 aa10.84□□□□□ -0.67
PMS1-217ENST00000450931 PPP6R1Q9UPN7 881 aa10.84□□□□□ -0.67
PMS1-217ENST00000450931 PTPRKQ15262 1439 aa10.84□□□□□ -0.67
PMS1-217ENST00000450931 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
PMS1-217ENST00000450931 POLR1AO95602 1720 aaPredicted RBP10.82□□□□□ -0.68
PMS1-217ENST00000450931 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
PMS1-217ENST00000450931 CPS1P31327 1500 aa10.8□□□□□ -0.68
PMS1-217ENST00000450931 RTEL1-TNFRSF6BF6WH68 1400 aa10.8□□□□□ -0.68
PMS1-217ENST00000450931 DNMT1P26358 1616 aaKnown RBP10.8□□□□□ -0.68
PMS1-217ENST00000450931 CCNB3Q8WWL7 1395 aa10.78□□□□□ -0.68
PMS1-217ENST00000450931 EHBP1L1Q8N3D4 1523 aa10.78□□□□□ -0.68
PMS1-217ENST00000450931 TIAM1Q13009 1591 aa10.78□□□□□ -0.68
PMS1-217ENST00000450931 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.68
PMS1-217ENST00000450931 ZNF335Q9H4Z2 1342 aaPredicted RBP10.77□□□□□ -0.69
PMS1-217ENST00000450931 KDM5DQ9BY66 1539 aa10.77□□□□□ -0.69
PMS1-217ENST00000450931 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
PMS1-217ENST00000450931 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
PMS1-217ENST00000450931 NEURL4Q96JN8 1562 aa10.76□□□□□ -0.69
PMS1-217ENST00000450931 MBD5Q9P267 1494 aa10.76□□□□□ -0.69
PMS1-217ENST00000450931 HNRNPMP52272 730 aaKnown RBP eCLIP10.76□□□□□ -0.694e-6■■■■□ 23.6
PMS1-217ENST00000450931 UBAP1LF5GYI3 381 aa10.76□□□□□ -0.69
PMS1-217ENST00000450931 CHIC1Q5VXU3 224 aa10.76□□□□□ -0.69
PMS1-217ENST00000450931 PZPP20742 1482 aa10.75□□□□□ -0.69
PMS1-217ENST00000450931 DEPDC5O75140 1603 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms