RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 TROQ12816 1431 aaPredicted RBP23.92■■□□□ 1.42
TOM1-210ENST00000449058 ANP32CO43423 234 aa23.91■■□□□ 1.42
TOM1-210ENST00000449058 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
TOM1-210ENST00000449058 ITSN2Q9NZM3 1697 aa23.91■■□□□ 1.42
TOM1-210ENST00000449058 NUP160Q12769 1436 aa23.88■■□□□ 1.41
TOM1-210ENST00000449058 CHMP7Q8WUX9 453 aaPredicted RBP23.87■■□□□ 1.41
TOM1-210ENST00000449058 ZNF644Q9H582 1327 aaPredicted RBP23.87■■□□□ 1.41
TOM1-210ENST00000449058 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
TOM1-210ENST00000449058 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
TOM1-210ENST00000449058 CAMSAP2Q08AD1 1489 aa23.84■■□□□ 1.41
TOM1-210ENST00000449058 ADGBQ8N7X0 1667 aa23.84■■□□□ 1.41
TOM1-210ENST00000449058 ANKRD30BQ9BXX2 1392 aa23.84■■□□□ 1.41
TOM1-210ENST00000449058 CARMIL2Q6F5E8 1435 aa23.83■■□□□ 1.41
TOM1-210ENST00000449058 KIF14Q15058 1648 aa23.83■■□□□ 1.41
TOM1-210ENST00000449058 RPRD2Q5VT52 1461 aaKnown RBP23.82■■□□□ 1.4
TOM1-210ENST00000449058 GPATCH8Q9UKJ3 1502 aaKnown RBP23.82■■□□□ 1.4
TOM1-210ENST00000449058 CROCC2H7BZ55 1655 aa23.81■■□□□ 1.4
TOM1-210ENST00000449058 HSPA5P11021 654 aaKnown RBP23.79■■□□□ 1.4
TOM1-210ENST00000449058 L3MBTL2Q969R5 705 aa23.79■■□□□ 1.4
TOM1-210ENST00000449058 TEX14Q8IWB6 1497 aa23.78■■□□□ 1.4
TOM1-210ENST00000449058 FOXD1Q16676 465 aa23.78■■□□□ 1.4
TOM1-210ENST00000449058 ADGRL2O95490 1459 aa23.77■■□□□ 1.4
TOM1-210ENST00000449058 JPH4Q96JJ6 628 aa23.77■■□□□ 1.4
TOM1-210ENST00000449058 MYT1Q01538 1121 aa23.77■■□□□ 1.4
TOM1-210ENST00000449058 ABCA8O94911 1581 aa23.76■■□□□ 1.39
TOM1-210ENST00000449058 WASHC2AQ641Q2 1341 aa23.76■■□□□ 1.39
TOM1-210ENST00000449058 NCOA1Q15788 1441 aa23.76■■□□□ 1.39
TOM1-210ENST00000449058 CFDP1Q9UEE9 299 aaPredicted RBP23.76■■□□□ 1.39
TOM1-210ENST00000449058 EIF4G2P78344 907 aaKnown RBP eCLIP23.75■■□□□ 1.39
TOM1-210ENST00000449058 PZPP20742 1482 aa23.75■■□□□ 1.39
TOM1-210ENST00000449058 FBLN2P98095 1184 aa23.73■■□□□ 1.39
TOM1-210ENST00000449058 CDC42BPAQ5VT25 1732 aa23.71■■□□□ 1.39
TOM1-210ENST00000449058 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
TOM1-210ENST00000449058 ABCC10Q5T3U5 1492 aa23.68■■□□□ 1.38
TOM1-210ENST00000449058 ATP10BO94823 1461 aa23.66■■□□□ 1.38
TOM1-210ENST00000449058 POLR1AO95602 1720 aaPredicted RBP23.66■■□□□ 1.38
TOM1-210ENST00000449058 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
TOM1-210ENST00000449058 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
TOM1-210ENST00000449058 ANKRD30AQ9BXX3 1397 aa23.64■■□□□ 1.38
TOM1-210ENST00000449058 SHANK2Q9UPX8 1470 aa23.63■■□□□ 1.37
TOM1-210ENST00000449058 SPATA31E1Q6ZUB1 1445 aa23.63■■□□□ 1.37
TOM1-210ENST00000449058 KIAA1107Q9UPP5 1409 aa23.62■■□□□ 1.37
TOM1-210ENST00000449058 ZNF777Q9ULD5 760 aaPredicted RBP23.62■■□□□ 1.37
TOM1-210ENST00000449058 CCDC7Q96M83 1385 aa23.62■■□□□ 1.37
TOM1-210ENST00000449058 PLEKHD1A6NEE1 506 aa23.62■■□□□ 1.37
TOM1-210ENST00000449058 MBD5Q9P267 1494 aa23.61■■□□□ 1.37
TOM1-210ENST00000449058 C11orf95C9JLR9 678 aaPredicted RBP23.59■■□□□ 1.37
TOM1-210ENST00000449058 ANKRD50Q9ULJ7 1429 aa23.58■■□□□ 1.37
TOM1-210ENST00000449058 FKBP8Q14318 412 aa23.58■■□□□ 1.37
TOM1-210ENST00000449058 C9orf84Q5VXU9 1444 aa23.55■■□□□ 1.36
TOM1-210ENST00000449058 ARHGEF5Q12774 1597 aa23.54■■□□□ 1.36
TOM1-210ENST00000449058 KDM5DQ9BY66 1539 aa23.53■■□□□ 1.36
TOM1-210ENST00000449058 PKD2Q13563 968 aa23.51■■□□□ 1.35
TOM1-210ENST00000449058 NEFLP07196 543 aa23.5■■□□□ 1.35
TOM1-210ENST00000449058 PTPRGP23470 1445 aa23.49■■□□□ 1.35
TOM1-210ENST00000449058 TSHZ2Q9NRE2 1034 aa23.49■■□□□ 1.35
TOM1-210ENST00000449058 KIF7Q2M1P5 1343 aa23.48■■□□□ 1.35
TOM1-210ENST00000449058 PRKRIP1Q9H875 184 aaPredicted RBP23.47■■□□□ 1.35
TOM1-210ENST00000449058 CDC42BPBQ9Y5S2 1711 aa23.47■■□□□ 1.35
TOM1-210ENST00000449058 PREX2Q70Z35 1606 aa23.47■■□□□ 1.35
TOM1-210ENST00000449058 CHD1O14646 1710 aa23.47■■□□□ 1.35
TOM1-210ENST00000449058 HNRNPUQ00839 825 aaKnown RBP eCLIP23.47■■□□□ 1.35
TOM1-210ENST00000449058 BCANQ96GW7 911 aa23.47■■□□□ 1.35
TOM1-210ENST00000449058 SAMD9LQ8IVG5 1584 aa23.45■■□□□ 1.34
TOM1-210ENST00000449058 NUP155O75694 1391 aa23.44■■□□□ 1.34
TOM1-210ENST00000449058 SHROOM2Q13796 1616 aa23.44■■□□□ 1.34
TOM1-210ENST00000449058 UHRF1BP1Q6BDS2 1440 aa23.44■■□□□ 1.34
TOM1-210ENST00000449058 ARHGEF12Q9NZN5 1544 aa23.43■■□□□ 1.34
TOM1-210ENST00000449058 KDM5CP41229 1560 aa23.43■■□□□ 1.34
TOM1-210ENST00000449058 TSPY4P0CV99 314 aa23.43■■□□□ 1.34
TOM1-210ENST00000449058 TSPY10P0CW01 314 aa23.43■■□□□ 1.34
TOM1-210ENST00000449058 BCORL1Q5H9F3 1711 aa23.43■■□□□ 1.34
TOM1-210ENST00000449058 CCDC184Q52MB2 194 aa23.42■■□□□ 1.34
TOM1-210ENST00000449058 KIF15Q9NS87 1388 aa23.42■■□□□ 1.34
TOM1-210ENST00000449058 CCDC141Q6ZP82 1450 aa23.4■■□□□ 1.34
TOM1-210ENST00000449058 USP47Q96K76 1375 aa23.4■■□□□ 1.34
TOM1-210ENST00000449058 HNRNPMP52272 730 aaKnown RBP eCLIP23.39■■□□□ 1.33
TOM1-210ENST00000449058 RALGAPBQ86X10 1494 aa23.39■■□□□ 1.33
TOM1-210ENST00000449058 MAST1Q9Y2H9 1570 aa23.34■■□□□ 1.33
TOM1-210ENST00000449058 ARID4BQ4LE39 1312 aaPredicted RBP23.34■■□□□ 1.33
TOM1-210ENST00000449058 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
TOM1-210ENST00000449058 TTC37Q6PGP7 1564 aa23.33■■□□□ 1.33
TOM1-210ENST00000449058 DHX29Q7Z478 1369 aaKnown RBP23.33■■□□□ 1.33
TOM1-210ENST00000449058 MRS2Q9HD23 443 aa23.32■■□□□ 1.32
TOM1-210ENST00000449058 FAM135AQ9P2D6 1515 aa23.31■■□□□ 1.32
TOM1-210ENST00000449058 ZNF326Q5BKZ1 582 aaKnown RBP23.31■■□□□ 1.32
TOM1-210ENST00000449058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.3■■□□□ 1.323e-6■■■■■ 31
TOM1-210ENST00000449058 SYCP2Q9BX26 1530 aa23.29■■□□□ 1.32
TOM1-210ENST00000449058 ABCC2Q92887 1545 aa23.29■■□□□ 1.32
TOM1-210ENST00000449058 UNC13BO14795 1591 aa23.29■■□□□ 1.32
TOM1-210ENST00000449058 MYO5CQ9NQX4 1742 aa23.28■■□□□ 1.32
TOM1-210ENST00000449058 ARHGAP5Q13017 1502 aa23.27■■□□□ 1.32
TOM1-210ENST00000449058 ERCC6L2Q5T890 1561 aa23.26■■□□□ 1.31
TOM1-210ENST00000449058 ZBED9Q6R2W3 1325 aa23.26■■□□□ 1.31
TOM1-210ENST00000449058 FAM9BQ8IZU0 186 aa23.26■■□□□ 1.31
TOM1-210ENST00000449058 PLXNC1O60486 1568 aa23.25■■□□□ 1.31
TOM1-210ENST00000449058 ROCK2O75116 1388 aaKnown RBP23.23■■□□□ 1.31
TOM1-210ENST00000449058 PLEKHH2Q8IVE3 1493 aa23.22■■□□□ 1.31
TOM1-210ENST00000449058 CARD11Q9BXL7 1154 aa23.22■■□□□ 1.31
TOM1-210ENST00000449058 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms