RNA–Protein interactions for RNA: ENST00000447733.5

TOM1-209, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-209ENST00000447733 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
TOM1-209ENST00000447733 ABCC2Q92887 1545 aa22.85■■□□□ 1.25
TOM1-209ENST00000447733 CFDP1Q9UEE9 299 aaPredicted RBP22.85■■□□□ 1.25
TOM1-209ENST00000447733 RRP7BPQ9NSQ0 103 aa22.84■■□□□ 1.25
TOM1-209ENST00000447733 CROCC2H7BZ55 1655 aa22.83■■□□□ 1.25
TOM1-209ENST00000447733 ZNF644Q9H582 1327 aaPredicted RBP22.83■■□□□ 1.24
TOM1-209ENST00000447733 ACIN1Q9UKV3 1341 aaKnown RBP22.83■■□□□ 1.24
TOM1-209ENST00000447733 ADGBQ8N7X0 1667 aa22.82■■□□□ 1.24
TOM1-209ENST00000447733 KDM6BO15054 1643 aa22.81■■□□□ 1.24
TOM1-209ENST00000447733 TIMELESSQ9UNS1 1208 aa22.8■■□□□ 1.24
TOM1-209ENST00000447733 SIN3AQ96ST3 1273 aa22.76■■□□□ 1.23
TOM1-209ENST00000447733 NEUROD1Q13562 356 aa22.75■■□□□ 1.23
TOM1-209ENST00000447733 UHRF1BP1LA0JNW5 1464 aa22.75■■□□□ 1.23
TOM1-209ENST00000447733 PREX2Q70Z35 1606 aa22.75■■□□□ 1.23
TOM1-209ENST00000447733 ADGRL2O95490 1459 aa22.74■■□□□ 1.23
TOM1-209ENST00000447733 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
TOM1-209ENST00000447733 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
TOM1-209ENST00000447733 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
TOM1-209ENST00000447733 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
TOM1-209ENST00000447733 CENPBP07199 599 aaPredicted RBP22.7■■□□□ 1.22
TOM1-209ENST00000447733 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
TOM1-209ENST00000447733 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
TOM1-209ENST00000447733 ARHGEF5Q12774 1597 aa22.68■■□□□ 1.22
TOM1-209ENST00000447733 DENND4BO75064 1496 aaPredicted RBP22.68■■□□□ 1.22
TOM1-209ENST00000447733 KDM5BQ9UGL1 1544 aa22.67■■□□□ 1.22
TOM1-209ENST00000447733 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
TOM1-209ENST00000447733 TRIM52Q96A61 297 aa22.66■■□□□ 1.22
TOM1-209ENST00000447733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.223e-6■■■■■ 31
TOM1-209ENST00000447733 SAMD9LQ8IVG5 1584 aa22.65■■□□□ 1.22
TOM1-209ENST00000447733 ANKRD30AQ9BXX3 1397 aa22.64■■□□□ 1.22
TOM1-209ENST00000447733 MYO5CQ9NQX4 1742 aa22.64■■□□□ 1.22
TOM1-209ENST00000447733 TONSLQ96HA7 1378 aa22.63■■□□□ 1.21
TOM1-209ENST00000447733 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
TOM1-209ENST00000447733 C9orf84Q5VXU9 1444 aa22.61■■□□□ 1.21
TOM1-209ENST00000447733 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
TOM1-209ENST00000447733 PPP1R15AO75807 674 aaPredicted RBP22.59■■□□□ 1.21
TOM1-209ENST00000447733 ARHGAP5Q13017 1502 aa22.58■■□□□ 1.21
TOM1-209ENST00000447733 CCDC141Q6ZP82 1450 aa22.57■■□□□ 1.2
TOM1-209ENST00000447733 RSPH4AQ5TD94 716 aa22.54■■□□□ 1.2
TOM1-209ENST00000447733 ANKRD50Q9ULJ7 1429 aa22.54■■□□□ 1.2
TOM1-209ENST00000447733 TSPY4P0CV99 314 aa22.53■■□□□ 1.2
TOM1-209ENST00000447733 TSPY10P0CW01 314 aa22.53■■□□□ 1.2
TOM1-209ENST00000447733 PLEKHH2Q8IVE3 1493 aa22.53■■□□□ 1.2
TOM1-209ENST00000447733 PZPP20742 1482 aa22.53■■□□□ 1.2
TOM1-209ENST00000447733 SYCP2Q9BX26 1530 aa22.53■■□□□ 1.2
TOM1-209ENST00000447733 MAST1Q9Y2H9 1570 aa22.52■■□□□ 1.2
TOM1-209ENST00000447733 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.2
TOM1-209ENST00000447733 GTF3C3Q9Y5Q9 886 aa22.51■■□□□ 1.19
TOM1-209ENST00000447733 KIAA1107Q9UPP5 1409 aa22.5■■□□□ 1.19
TOM1-209ENST00000447733 PLCH2O75038 1416 aa22.49■■□□□ 1.19
TOM1-209ENST00000447733 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
TOM1-209ENST00000447733 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
TOM1-209ENST00000447733 MIER1Q8N108 512 aa22.48■■□□□ 1.19
TOM1-209ENST00000447733 SLC4A1APQ9BWU0 796 aaKnown RBP22.48■■□□□ 1.19
TOM1-209ENST00000447733 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
TOM1-209ENST00000447733 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
TOM1-209ENST00000447733 KDM5DQ9BY66 1539 aa22.46■■□□□ 1.19
TOM1-209ENST00000447733 ARAP3Q8WWN8 1544 aa22.46■■□□□ 1.19
TOM1-209ENST00000447733 RPRD2Q5VT52 1461 aaKnown RBP22.45■■□□□ 1.18
TOM1-209ENST00000447733 WDR7Q9Y4E6 1490 aa22.45■■□□□ 1.18
TOM1-209ENST00000447733 PLXNC1O60486 1568 aa22.43■■□□□ 1.18
TOM1-209ENST00000447733 FOXD1Q16676 465 aa22.43■■□□□ 1.18
TOM1-209ENST00000447733 ABCC1P33527 1531 aa22.42■■□□□ 1.18
TOM1-209ENST00000447733 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
TOM1-209ENST00000447733 ARHGEF12Q9NZN5 1544 aa22.39■■□□□ 1.17
TOM1-209ENST00000447733 ABCA9Q8IUA7 1624 aa22.39■■□□□ 1.17
TOM1-209ENST00000447733 TEX14Q8IWB6 1497 aa22.36■■□□□ 1.17
TOM1-209ENST00000447733 NUP155O75694 1391 aa22.36■■□□□ 1.17
TOM1-209ENST00000447733 UNC13BO14795 1591 aa22.34■■□□□ 1.17
TOM1-209ENST00000447733 YTHDC1Q96MU7 727 aaKnown RBP22.34■■□□□ 1.17
TOM1-209ENST00000447733 ASXL2Q76L83 1435 aa22.33■■□□□ 1.16
TOM1-209ENST00000447733 PKD2Q13563 968 aa22.32■■□□□ 1.16
TOM1-209ENST00000447733 L3MBTL2Q969R5 705 aa22.32■■□□□ 1.16
TOM1-209ENST00000447733 DUOX2Q9NRD8 1548 aa22.31■■□□□ 1.16
TOM1-209ENST00000447733 FAM135AQ9P2D6 1515 aa22.29■■□□□ 1.16
TOM1-209ENST00000447733 TRAPPC8Q9Y2L5 1435 aa22.28■■□□□ 1.16
TOM1-209ENST00000447733 ERBINQ96RT1 1412 aa22.27■■□□□ 1.16
TOM1-209ENST00000447733 FANCAO15360 1455 aa22.27■■□□□ 1.15
TOM1-209ENST00000447733 RTEL1-TNFRSF6BF6WH68 1400 aa22.25■■□□□ 1.15
TOM1-209ENST00000447733 IQGAP3Q86VI3 1631 aa22.25■■□□□ 1.15
TOM1-209ENST00000447733 ZFYVE16Q7Z3T8 1539 aa22.23■■□□□ 1.15
TOM1-209ENST00000447733 MAGI2Q86UL8 1455 aa22.23■■□□□ 1.15
TOM1-209ENST00000447733 NPM1P06748 294 aaKnown RBP eCLIP22.23■■□□□ 1.15
TOM1-209ENST00000447733 HIRIP3Q9BW71 556 aaPredicted RBP22.21■■□□□ 1.15
TOM1-209ENST00000447733 INO80Q9ULG1 1556 aaPredicted RBP22.2■■□□□ 1.14
TOM1-209ENST00000447733 SPAG9O60271 1321 aaKnown RBP22.18■■□□□ 1.14
TOM1-209ENST00000447733 ADGRL1O94910 1474 aa22.18■■□□□ 1.14
TOM1-209ENST00000447733 DDX10Q13206 875 aaKnown RBP22.17■■□□□ 1.14
TOM1-209ENST00000447733 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
TOM1-209ENST00000447733 ATP7AQ04656 1500 aa22.16■■□□□ 1.14
TOM1-209ENST00000447733 NBPF8Q3BBV2 869 aa22.16■■□□□ 1.14
TOM1-209ENST00000447733 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.14
TOM1-209ENST00000447733 HSPA5P11021 654 aaKnown RBP22.14■■□□□ 1.13
TOM1-209ENST00000447733 AFAP1Q8N556 730 aa22.13■■□□□ 1.13
TOM1-209ENST00000447733 SCAPERQ9BY12 1400 aa22.13■■□□□ 1.13
TOM1-209ENST00000447733 DEPDC5O75140 1603 aa22.11■■□□□ 1.13
TOM1-209ENST00000447733 UHRF1BP1Q6BDS2 1440 aa22.1■■□□□ 1.13
TOM1-209ENST00000447733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.09■■□□□ 1.13
TOM1-209ENST00000447733 EIF2AK4Q9P2K8 1649 aaKnown RBP22.08■■□□□ 1.13
TOM1-209ENST00000447733 CD109Q6YHK3 1445 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms