RNA–Protein interactions for RNA: ENST00000447715.6

PPFIA4-204, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 6,349 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-204ENST00000447715 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
PPFIA4-204ENST00000447715 KIF27Q86VH2 1401 aa17■□□□□ 0.31
PPFIA4-204ENST00000447715 CALRP27797 417 aaKnown RBP16.98■□□□□ 0.31
PPFIA4-204ENST00000447715 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
PPFIA4-204ENST00000447715 CHMP4BQ9H444 224 aaKnown RBP16.96■□□□□ 0.31
PPFIA4-204ENST00000447715 SLKQ9H2G2 1235 aaPredicted RBP16.94■□□□□ 0.3
PPFIA4-204ENST00000447715 POGKQ9P215 609 aa16.94■□□□□ 0.3
PPFIA4-204ENST00000447715 TPM4P67936 248 aa16.93■□□□□ 0.3
PPFIA4-204ENST00000447715 SETQ01105 290 aaPredicted RBP16.93■□□□□ 0.3
PPFIA4-204ENST00000447715 KIAA1211Q6ZU35 1233 aa16.93■□□□□ 0.3
PPFIA4-204ENST00000447715 CARD11Q9BXL7 1154 aa16.92■□□□□ 0.3
PPFIA4-204ENST00000447715 MS4A1P11836 297 aa16.91■□□□□ 0.3
PPFIA4-204ENST00000447715 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
PPFIA4-204ENST00000447715 CEP89Q96ST8 783 aa16.91■□□□□ 0.3
PPFIA4-204ENST00000447715 RASSF8Q8NHQ8 419 aa16.91■□□□□ 0.3
PPFIA4-204ENST00000447715 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
PPFIA4-204ENST00000447715 GBP4Q96PP9 640 aa16.9■□□□□ 0.3
PPFIA4-204ENST00000447715 CECR2Q9BXF3 1484 aa16.9■□□□□ 0.3
PPFIA4-204ENST00000447715 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
PPFIA4-204ENST00000447715 SMARCA2P51531 1590 aa16.9■□□□□ 0.3
PPFIA4-204ENST00000447715 CEP164Q9UPV0 1460 aa16.89■□□□□ 0.29
PPFIA4-204ENST00000447715 FOXD4L1Q9NU39 408 aa16.87■□□□□ 0.29
PPFIA4-204ENST00000447715 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
PPFIA4-204ENST00000447715 NOL8Q76FK4 1167 aaKnown RBP16.87■□□□□ 0.29
PPFIA4-204ENST00000447715 PTMSP20962 102 aa16.87■□□□□ 0.29
PPFIA4-204ENST00000447715 CCAR2Q8N163 923 aaKnown RBP16.85■□□□□ 0.29
PPFIA4-204ENST00000447715 TPM3P06753 285 aa16.85■□□□□ 0.29
PPFIA4-204ENST00000447715 PES1O00541 588 aaKnown RBP16.84■□□□□ 0.29
PPFIA4-204ENST00000447715 VPS53Q5VIR6 699 aa16.84■□□□□ 0.29
PPFIA4-204ENST00000447715 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
PPFIA4-204ENST00000447715 SYAP1Q96A49 352 aaPredicted RBP16.83■□□□□ 0.29
PPFIA4-204ENST00000447715 GOLGA6L3A6NEY3 463 aa16.83■□□□□ 0.28
PPFIA4-204ENST00000447715 EIF4G1Q04637 1599 aaKnown RBP16.82■□□□□ 0.28
PPFIA4-204ENST00000447715 FOXD4L5Q5VV16 416 aaPredicted RBP16.82■□□□□ 0.28
PPFIA4-204ENST00000447715 FOXD4L4Q8WXT5 416 aaPredicted RBP16.82■□□□□ 0.28
PPFIA4-204ENST00000447715 TAF7LQ5H9L4 462 aa16.81■□□□□ 0.28
PPFIA4-204ENST00000447715 MLECQ14165 292 aa16.81■□□□□ 0.28
PPFIA4-204ENST00000447715 KRI1Q8N9T8 703 aaKnown RBP16.81■□□□□ 0.28
PPFIA4-204ENST00000447715 CHMP3Q9Y3E7 222 aa16.79■□□□□ 0.28
PPFIA4-204ENST00000447715 MFAP1P55081 439 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-204ENST00000447715 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-204ENST00000447715 HSP90AA2PQ14568 343 aaPredicted RBP16.78■□□□□ 0.28
PPFIA4-204ENST00000447715 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
PPFIA4-204ENST00000447715 GORABQ5T7V8 394 aa16.78■□□□□ 0.28
PPFIA4-204ENST00000447715 VSIG10Q8N0Z9 540 aa16.77■□□□□ 0.28
PPFIA4-204ENST00000447715 MARCH6O60337 910 aa16.77■□□□□ 0.27
PPFIA4-204ENST00000447715 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
PPFIA4-204ENST00000447715 USP35Q9P2H5 1018 aa16.76■□□□□ 0.27
PPFIA4-204ENST00000447715 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
PPFIA4-204ENST00000447715 ZNF771Q7L3S4 317 aaPredicted RBP16.75■□□□□ 0.27
PPFIA4-204ENST00000447715 CUX2O14529 1486 aa16.75■□□□□ 0.27
PPFIA4-204ENST00000447715 SAFB2Q14151 953 aaKnown RBP eCLIP16.75■□□□□ 0.27
PPFIA4-204ENST00000447715 TRIM6-TRIM34B2RNG4 842 aa16.75■□□□□ 0.27
PPFIA4-204ENST00000447715 ITPRIPQ8IWB1 547 aa16.75■□□□□ 0.27
PPFIA4-204ENST00000447715 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
PPFIA4-204ENST00000447715 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
PPFIA4-204ENST00000447715 CCDC34Q96HJ3 373 aa16.74■□□□□ 0.27
PPFIA4-204ENST00000447715 TOMM22Q9NS69 142 aa16.74■□□□□ 0.27
PPFIA4-204ENST00000447715 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
PPFIA4-204ENST00000447715 MYO15BQ96JP2 1530 aa16.73■□□□□ 0.27
PPFIA4-204ENST00000447715 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
PPFIA4-204ENST00000447715 TPD52L1Q16890 204 aaPredicted RBP16.73■□□□□ 0.27
PPFIA4-204ENST00000447715 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
PPFIA4-204ENST00000447715 CFDP1Q9UEE9 299 aaPredicted RBP16.72■□□□□ 0.27
PPFIA4-204ENST00000447715 RRP12Q5JTH9 1297 aaKnown RBP16.72■□□□□ 0.27
PPFIA4-204ENST00000447715 G3V3G9 751 aa16.71■□□□□ 0.27
PPFIA4-204ENST00000447715 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.27
PPFIA4-204ENST00000447715 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.26
PPFIA4-204ENST00000447715 ZNF592Q92610 1267 aa16.69■□□□□ 0.26
PPFIA4-204ENST00000447715 SF3A1Q15459 793 aaKnown RBP16.69■□□□□ 0.26
PPFIA4-204ENST00000447715 MORC1Q86VD1 984 aa16.69■□□□□ 0.26
PPFIA4-204ENST00000447715 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
PPFIA4-204ENST00000447715 CARMIL1Q5VZK9 1371 aa16.68■□□□□ 0.26
PPFIA4-204ENST00000447715 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
PPFIA4-204ENST00000447715 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
PPFIA4-204ENST00000447715 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
PPFIA4-204ENST00000447715 TSR1Q2NL82 804 aaKnown RBP16.67■□□□□ 0.26
PPFIA4-204ENST00000447715 CSB-PGBD3P0DP91 1061 aa16.66■□□□□ 0.26
PPFIA4-204ENST00000447715 FHAD1B1AJZ9 1412 aa16.65■□□□□ 0.26
PPFIA4-204ENST00000447715 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-204ENST00000447715 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-204ENST00000447715 SIN3AQ96ST3 1273 aa16.65■□□□□ 0.26
PPFIA4-204ENST00000447715 IPO8O15397 1037 aaKnown RBP16.64■□□□□ 0.26
PPFIA4-204ENST00000447715 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
PPFIA4-204ENST00000447715 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.63■□□□□ 0.25
PPFIA4-204ENST00000447715 WIZO95785 1651 aa16.63■□□□□ 0.25
PPFIA4-204ENST00000447715 GPATCH3Q96I76 525 aa16.63■□□□□ 0.25
PPFIA4-204ENST00000447715 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
PPFIA4-204ENST00000447715 PCMTD1Q96MG8 357 aaPredicted RBP16.62■□□□□ 0.25
PPFIA4-204ENST00000447715 BCL11BQ9C0K0 894 aaPredicted RBP16.62■□□□□ 0.25
PPFIA4-204ENST00000447715 GPS2Q13227 327 aa16.62■□□□□ 0.25
PPFIA4-204ENST00000447715 CCDC70Q6NSX1 233 aa16.62■□□□□ 0.25
PPFIA4-204ENST00000447715 FRAT2O75474 233 aaPredicted RBP16.62■□□□□ 0.25
PPFIA4-204ENST00000447715 CCNB3Q8WWL7 1395 aa16.62■□□□□ 0.25
PPFIA4-204ENST00000447715 TMF1P82094 1093 aa16.61■□□□□ 0.25
PPFIA4-204ENST00000447715 PHF14O94880 888 aa16.61■□□□□ 0.25
PPFIA4-204ENST00000447715 SLC4A10Q6U841 1118 aa16.6■□□□□ 0.25
PPFIA4-204ENST00000447715 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
PPFIA4-204ENST00000447715 KIF16BQ96L93 1317 aa16.6■□□□□ 0.25
PPFIA4-204ENST00000447715 H3BQV1 296 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms