RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 ACIN1Q9UKV3 1341 aaKnown RBP28.27■■■□□ 2.12
FAM3A-215ENST00000447601 CAMSAP2Q08AD1 1489 aa28.27■■■□□ 2.12
FAM3A-215ENST00000447601 NEUROD1Q13562 356 aa28.26■■■□□ 2.11
FAM3A-215ENST00000447601 ABCC10Q5T3U5 1492 aa28.23■■■□□ 2.11
FAM3A-215ENST00000447601 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
FAM3A-215ENST00000447601 KDM6BO15054 1643 aa28.15■■■□□ 2.1
FAM3A-215ENST00000447601 ERCC6L2Q5T890 1561 aa28.14■■■□□ 2.1
FAM3A-215ENST00000447601 TRIM52Q96A61 297 aa28.14■■■□□ 2.1
FAM3A-215ENST00000447601 ABCC2Q92887 1545 aa28.14■■■□□ 2.09
FAM3A-215ENST00000447601 ZNF777Q9ULD5 760 aaPredicted RBP28.13■■■□□ 2.09
FAM3A-215ENST00000447601 TONSLQ96HA7 1378 aa28.12■■■□□ 2.09
FAM3A-215ENST00000447601 CDC42BPAQ5VT25 1732 aa28.1■■■□□ 2.09
FAM3A-215ENST00000447601 ADGRL2O95490 1459 aa28.1■■■□□ 2.09
FAM3A-215ENST00000447601 PPP1R15AO75807 674 aaPredicted RBP28.08■■■□□ 2.09
FAM3A-215ENST00000447601 NCOA1Q15788 1441 aa28.07■■■□□ 2.08
FAM3A-215ENST00000447601 CROCC2H7BZ55 1655 aa28.06■■■□□ 2.08
FAM3A-215ENST00000447601 MPHOSPH9Q99550 1183 aa28.06■■■□□ 2.08
FAM3A-215ENST00000447601 ADGBQ8N7X0 1667 aa28.05■■■□□ 2.08
FAM3A-215ENST00000447601 DENND4BO75064 1496 aaPredicted RBP28.05■■■□□ 2.08
FAM3A-215ENST00000447601 SHANK2Q9UPX8 1470 aa28.05■■■□□ 2.08
FAM3A-215ENST00000447601 ANKRD30AQ9BXX3 1397 aa28.04■■■□□ 2.08
FAM3A-215ENST00000447601 UHRF1BP1LA0JNW5 1464 aa28.03■■■□□ 2.08
FAM3A-215ENST00000447601 MIER1Q8N108 512 aa27.99■■■□□ 2.07
FAM3A-215ENST00000447601 PREX2Q70Z35 1606 aa27.98■■■□□ 2.07
FAM3A-215ENST00000447601 ARHGEF5Q12774 1597 aa27.96■■■□□ 2.07
FAM3A-215ENST00000447601 C9orf84Q5VXU9 1444 aa27.96■■■□□ 2.07
FAM3A-215ENST00000447601 TSPY4P0CV99 314 aa27.93■■■□□ 2.06
FAM3A-215ENST00000447601 TSPY10P0CW01 314 aa27.93■■■□□ 2.06
FAM3A-215ENST00000447601 KDM5BQ9UGL1 1544 aa27.93■■■□□ 2.06
FAM3A-215ENST00000447601 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.92■■■□□ 2.06
FAM3A-215ENST00000447601 MBD5Q9P267 1494 aa27.92■■■□□ 2.06
FAM3A-215ENST00000447601 RSPH4AQ5TD94 716 aa27.91■■■□□ 2.06
FAM3A-215ENST00000447601 TTC37Q6PGP7 1564 aa27.9■■■□□ 2.06
FAM3A-215ENST00000447601 SAMD9LQ8IVG5 1584 aa27.9■■■□□ 2.06
FAM3A-215ENST00000447601 ANKRD50Q9ULJ7 1429 aa27.9■■■□□ 2.06
FAM3A-215ENST00000447601 SLC4A1APQ9BWU0 796 aaKnown RBP27.9■■■□□ 2.06
FAM3A-215ENST00000447601 CCDC141Q6ZP82 1450 aa27.89■■■□□ 2.05
FAM3A-215ENST00000447601 ZCCHC11Q5TAX3 1644 aaKnown RBP27.88■■■□□ 2.05
FAM3A-215ENST00000447601 CDC42BPBQ9Y5S2 1711 aa27.88■■■□□ 2.05
FAM3A-215ENST00000447601 ANKRD30BQ9BXX2 1392 aa27.88■■■□□ 2.05
FAM3A-215ENST00000447601 HNRNPMP52272 730 aaKnown RBP eCLIP27.87■■■□□ 2.05
FAM3A-215ENST00000447601 ARHGAP5Q13017 1502 aa27.86■■■□□ 2.05
FAM3A-215ENST00000447601 PZPP20742 1482 aa27.86■■■□□ 2.05
FAM3A-215ENST00000447601 CENPBP07199 599 aaPredicted RBP27.85■■■□□ 2.05
FAM3A-215ENST00000447601 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
FAM3A-215ENST00000447601 FOXD1Q16676 465 aa27.82■■■□□ 2.04
FAM3A-215ENST00000447601 RPRD2Q5VT52 1461 aaKnown RBP27.81■■■□□ 2.04
FAM3A-215ENST00000447601 KIF15Q9NS87 1388 aa27.8■■■□□ 2.04
FAM3A-215ENST00000447601 KIAA1107Q9UPP5 1409 aa27.8■■■□□ 2.04
FAM3A-215ENST00000447601 MYO5CQ9NQX4 1742 aa27.8■■■□□ 2.04
FAM3A-215ENST00000447601 KCNH8Q96L42 1107 aa27.79■■■□□ 2.04
FAM3A-215ENST00000447601 SYCP2Q9BX26 1530 aa27.78■■■□□ 2.04
FAM3A-215ENST00000447601 PLCH2O75038 1416 aa27.77■■■□□ 2.04
FAM3A-215ENST00000447601 MAST1Q9Y2H9 1570 aa27.75■■■□□ 2.03
FAM3A-215ENST00000447601 KDM5DQ9BY66 1539 aa27.73■■■□□ 2.03
FAM3A-215ENST00000447601 L3MBTL2Q969R5 705 aa27.71■■■□□ 2.03
FAM3A-215ENST00000447601 OSCARQ8IYS5 282 aa27.71■■■□□ 2.03
FAM3A-215ENST00000447601 NUP155O75694 1391 aa27.71■■■□□ 2.03
FAM3A-215ENST00000447601 EFCAB2Q5VUJ9 269 aa27.7■■■□□ 2.02
FAM3A-215ENST00000447601 TEX14Q8IWB6 1497 aa27.69■■■□□ 2.02
FAM3A-215ENST00000447601 PKD2Q13563 968 aa27.69■■■□□ 2.02
FAM3A-215ENST00000447601 WDR7Q9Y4E6 1490 aa27.67■■■□□ 2.02
FAM3A-215ENST00000447601 ARAP3Q8WWN8 1544 aa27.66■■■□□ 2.02
FAM3A-215ENST00000447601 PLXNC1O60486 1568 aa27.64■■■□□ 2.02
FAM3A-215ENST00000447601 YTHDC1Q96MU7 727 aaKnown RBP27.63■■■□□ 2.01
FAM3A-215ENST00000447601 HIRIP3Q9BW71 556 aaPredicted RBP27.62■■■□□ 2.01
FAM3A-215ENST00000447601 ARHGEF12Q9NZN5 1544 aa27.62■■■□□ 2.01
FAM3A-215ENST00000447601 DDX10Q13206 875 aaKnown RBP27.62■■■□□ 2.01
FAM3A-215ENST00000447601 ABCC1P33527 1531 aa27.62■■■□□ 2.01
FAM3A-215ENST00000447601 DUOX2Q9NRD8 1548 aa27.55■■■□□ 2
FAM3A-215ENST00000447601 EIF4G2P78344 907 aaKnown RBP eCLIP27.55■■■□□ 2
FAM3A-215ENST00000447601 FAM135AQ9P2D6 1515 aa27.53■■■□□ 2
FAM3A-215ENST00000447601 SCAF1Q9H7N4 1312 aaKnown RBP27.53■■■□□ 2
FAM3A-215ENST00000447601 UNC13BO14795 1591 aa27.53■■■□□ 2
FAM3A-215ENST00000447601 ERBINQ96RT1 1412 aa27.52■■■□□ 2
FAM3A-215ENST00000447601 HSPA5P11021 654 aaKnown RBP27.52■■■□□ 2
FAM3A-215ENST00000447601 ASXL2Q76L83 1435 aa27.52■■■□□ 2
FAM3A-215ENST00000447601 ABCA9Q8IUA7 1624 aa27.51■■□□□ 1.99
FAM3A-215ENST00000447601 TRAPPC8Q9Y2L5 1435 aa27.51■■□□□ 1.99
FAM3A-215ENST00000447601 NBPF8Q3BBV2 869 aa27.5■■□□□ 1.99
FAM3A-215ENST00000447601 RTEL1-TNFRSF6BF6WH68 1400 aa27.48■■□□□ 1.99
FAM3A-215ENST00000447601 NPM1P06748 294 aaKnown RBP eCLIP27.47■■□□□ 1.99
FAM3A-215ENST00000447601 FANCAO15360 1455 aa27.47■■□□□ 1.99
FAM3A-215ENST00000447601 SPAG9O60271 1321 aaKnown RBP27.44■■□□□ 1.98
FAM3A-215ENST00000447601 MAGI2Q86UL8 1455 aa27.43■■□□□ 1.98
FAM3A-215ENST00000447601 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
FAM3A-215ENST00000447601 ZFYVE16Q7Z3T8 1539 aa27.39■■□□□ 1.98
FAM3A-215ENST00000447601 ANP32CO43423 234 aa27.39■■□□□ 1.97
FAM3A-215ENST00000447601 UHRF1BP1Q6BDS2 1440 aa27.39■■□□□ 1.97
FAM3A-215ENST00000447601 AFAP1Q8N556 730 aa27.38■■□□□ 1.97
FAM3A-215ENST00000447601 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.38■■□□□ 1.97
FAM3A-215ENST00000447601 ADGRL1O94910 1474 aa27.36■■□□□ 1.97
FAM3A-215ENST00000447601 WASHC2AQ641Q2 1341 aa27.36■■□□□ 1.97
FAM3A-215ENST00000447601 SPATA31E1Q6ZUB1 1445 aa27.35■■□□□ 1.97
FAM3A-215ENST00000447601 CCDC144AA2RUR9 1427 aa27.35■■□□□ 1.97
FAM3A-215ENST00000447601 SCAPERQ9BY12 1400 aa27.33■■□□□ 1.97
FAM3A-215ENST00000447601 CCER2I3L3R5 266 aa27.32■■□□□ 1.96
FAM3A-215ENST00000447601 ATP7AQ04656 1500 aa27.31■■□□□ 1.96
FAM3A-215ENST00000447601 INO80Q9ULG1 1556 aaPredicted RBP27.31■■□□□ 1.96
FAM3A-215ENST00000447601 RALGAPBQ86X10 1494 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms