RNA–Protein interactions for RNA: ENST00000447393.5

PACS2-203, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 1 (best) BASIC

Gene PACS2, Length 6,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-203ENST00000447393 GOLGA6L6A8MZA4 724 aa22.56■■□□□ 1.2
PACS2-203ENST00000447393 FOXD1Q16676 465 aa22.56■■□□□ 1.2
PACS2-203ENST00000447393 CLSTN1O94985 981 aa22.55■■□□□ 1.2
PACS2-203ENST00000447393 NACADO15069 1562 aa22.55■■□□□ 1.2
PACS2-203ENST00000447393 HSCBQ8IWL3 235 aa22.54■■□□□ 1.2
PACS2-203ENST00000447393 SPRYD3Q8NCJ5 442 aa22.52■■□□□ 1.2
PACS2-203ENST00000447393 MCCP23508 829 aa22.52■■□□□ 1.2
PACS2-203ENST00000447393 HSPA5P11021 654 aaKnown RBP22.51■■□□□ 1.19
PACS2-203ENST00000447393 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
PACS2-203ENST00000447393 NOP58Q9Y2X3 529 aaKnown RBP22.5■■□□□ 1.19
PACS2-203ENST00000447393 ERICH6BQ5W0A0 696 aa22.49■■□□□ 1.19
PACS2-203ENST00000447393 NAP1L5Q96NT1 182 aaPredicted RBP22.49■■□□□ 1.19
PACS2-203ENST00000447393 U2AF1L5P0DN76 240 aaPredicted RBP22.48■■□□□ 1.19
PACS2-203ENST00000447393 U2AF1Q01081 240 aaKnown RBP eCLIP22.48■■□□□ 1.19
PACS2-203ENST00000447393 NRDCO43847 1150 aa22.48■■□□□ 1.19
PACS2-203ENST00000447393 RTN4Q9NQC3 1192 aaKnown RBP22.45■■□□□ 1.18
PACS2-203ENST00000447393 CCDC9Q9Y3X0 531 aaKnown RBP22.45■■□□□ 1.18
PACS2-203ENST00000447393 KTN1Q86UP2 1357 aaKnown RBP22.45■■□□□ 1.18
PACS2-203ENST00000447393 GNL2Q13823 731 aaKnown RBP22.44■■□□□ 1.18
PACS2-203ENST00000447393 IPO8O15397 1037 aaKnown RBP22.43■■□□□ 1.18
PACS2-203ENST00000447393 SOGA1O94964 1423 aa22.43■■□□□ 1.18
PACS2-203ENST00000447393 ARHGAP35Q9NRY4 1499 aa22.42■■□□□ 1.18
PACS2-203ENST00000447393 CARMIL2Q6F5E8 1435 aa22.41■■□□□ 1.18
PACS2-203ENST00000447393 SETD5Q9C0A6 1442 aa22.41■■□□□ 1.18
PACS2-203ENST00000447393 KIAA1211Q6ZU35 1233 aa22.41■■□□□ 1.18
PACS2-203ENST00000447393 ROCK2O75116 1388 aaKnown RBP22.41■■□□□ 1.18
PACS2-203ENST00000447393 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
PACS2-203ENST00000447393 EFCAB2Q5VUJ9 269 aa22.4■■□□□ 1.18
PACS2-203ENST00000447393 ITPRIPQ8IWB1 547 aa22.39■■□□□ 1.17
PACS2-203ENST00000447393 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
PACS2-203ENST00000447393 NUP155O75694 1391 aa22.38■■□□□ 1.17
PACS2-203ENST00000447393 NUTM2DQ5VT03 806 aaPredicted RBP22.38■■□□□ 1.17
PACS2-203ENST00000447393 DRC7Q8IY82 874 aa22.37■■□□□ 1.17
PACS2-203ENST00000447393 KIF3BO15066 747 aa22.37■■□□□ 1.17
PACS2-203ENST00000447393 CALD1Q05682 793 aaKnown RBP22.37■■□□□ 1.17
PACS2-203ENST00000447393 KANK4Q5T7N3 995 aaPredicted RBP22.35■■□□□ 1.17
PACS2-203ENST00000447393 CECR2Q9BXF3 1484 aa22.35■■□□□ 1.17
PACS2-203ENST00000447393 CHMP3Q9Y3E7 222 aa22.35■■□□□ 1.17
PACS2-203ENST00000447393 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
PACS2-203ENST00000447393 MPHOSPH9Q99550 1183 aa22.34■■□□□ 1.17
PACS2-203ENST00000447393 TMX4Q9H1E5 349 aaPredicted RBP22.33■■□□□ 1.17
PACS2-203ENST00000447393 CCER2I3L3R5 266 aa22.32■■□□□ 1.16
PACS2-203ENST00000447393 GORABQ5T7V8 394 aa22.32■■□□□ 1.16
PACS2-203ENST00000447393 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
PACS2-203ENST00000447393 STK31Q9BXU1 1019 aa22.32■■□□□ 1.16
PACS2-203ENST00000447393 SPAG9O60271 1321 aaKnown RBP22.3■■□□□ 1.16
PACS2-203ENST00000447393 NGDNQ8NEJ9 315 aaKnown RBP22.29■■□□□ 1.16
PACS2-203ENST00000447393 EID1Q9Y6B2 187 aa22.29■■□□□ 1.16
PACS2-203ENST00000447393 CHAF1AQ13111 956 aaPredicted RBP22.29■■□□□ 1.16
PACS2-203ENST00000447393 TAF7LQ5H9L4 462 aa22.29■■□□□ 1.16
PACS2-203ENST00000447393 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
PACS2-203ENST00000447393 HNRNPMP52272 730 aaKnown RBP eCLIP22.29■■□□□ 1.162e-7■■■■□ 26.4
PACS2-203ENST00000447393 RCAN3Q9UKA8 241 aa22.28■■□□□ 1.16
PACS2-203ENST00000447393 RWDD1Q9H446 243 aaPredicted RBP22.28■■□□□ 1.16
PACS2-203ENST00000447393 ANKRD30AQ9BXX3 1397 aa22.28■■□□□ 1.16
PACS2-203ENST00000447393 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
PACS2-203ENST00000447393 TERF2IPQ9NYB0 399 aa22.26■■□□□ 1.15
PACS2-203ENST00000447393 RALBP1Q15311 655 aa22.26■■□□□ 1.15
PACS2-203ENST00000447393 MSNP26038 577 aaKnown RBP22.25■■□□□ 1.15
PACS2-203ENST00000447393 WASHC2CQ9Y4E1 1318 aa22.25■■□□□ 1.15
PACS2-203ENST00000447393 SLC4A10Q6U841 1118 aa22.24■■□□□ 1.15
PACS2-203ENST00000447393 SMC4Q9NTJ3 1288 aa22.24■■□□□ 1.15
PACS2-203ENST00000447393 EIF3AQ14152 1382 aaKnown RBP22.24■■□□□ 1.15
PACS2-203ENST00000447393 PDS5BQ9NTI5 1447 aa22.23■■□□□ 1.15
PACS2-203ENST00000447393 AMPHP49418 695 aa22.23■■□□□ 1.15
PACS2-203ENST00000447393 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
PACS2-203ENST00000447393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.22■■□□□ 1.15
PACS2-203ENST00000447393 CCDC146Q8IYE0 955 aa22.22■■□□□ 1.15
PACS2-203ENST00000447393 TRIM6-TRIM34B2RNG4 842 aa22.21■■□□□ 1.15
PACS2-203ENST00000447393 CHMP4AQ9BY43 222 aa22.21■■□□□ 1.15
PACS2-203ENST00000447393 G3V3G9 751 aa22.2■■□□□ 1.15
PACS2-203ENST00000447393 DCAF8Q5TAQ9 597 aa22.2■■□□□ 1.15
PACS2-203ENST00000447393 CLUAP1Q96AJ1 413 aa22.19■■□□□ 1.14
PACS2-203ENST00000447393 RAB3GAP2Q9H2M9 1393 aa22.19■■□□□ 1.14
PACS2-203ENST00000447393 L1TD1Q5T7N2 865 aaKnown RBP22.19■■□□□ 1.14
PACS2-203ENST00000447393 GPATCH3Q96I76 525 aa22.18■■□□□ 1.14
PACS2-203ENST00000447393 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
PACS2-203ENST00000447393 SLKQ9H2G2 1235 aaPredicted RBP22.18■■□□□ 1.14
PACS2-203ENST00000447393 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
PACS2-203ENST00000447393 HSP90B1P14625 803 aaKnown RBP22.17■■□□□ 1.14
PACS2-203ENST00000447393 MFAP1P55081 439 aaKnown RBP22.16■■□□□ 1.14
PACS2-203ENST00000447393 GBP4Q96PP9 640 aa22.16■■□□□ 1.14
PACS2-203ENST00000447393 GZF1Q9H116 711 aaPredicted RBP22.15■■□□□ 1.14
PACS2-203ENST00000447393 HMMRO75330 724 aa22.15■■□□□ 1.14
PACS2-203ENST00000447393 GTF2E1P29083 439 aaPredicted RBP22.15■■□□□ 1.14
PACS2-203ENST00000447393 TRAK1Q9UPV9 953 aa22.15■■□□□ 1.14
PACS2-203ENST00000447393 KIAA2012Q0VF49 1180 aa22.15■■□□□ 1.14
PACS2-203ENST00000447393 PMFBP1Q8TBY8 1022 aa22.14■■□□□ 1.13
PACS2-203ENST00000447393 ABCC8Q09428 1581 aa22.14■■□□□ 1.13
PACS2-203ENST00000447393 HDAC5Q9UQL6 1122 aa22.13■■□□□ 1.13
PACS2-203ENST00000447393 HTATSF1O43719 755 aaKnown RBP22.13■■□□□ 1.13
PACS2-203ENST00000447393 L3MBTL2Q969R5 705 aa22.13■■□□□ 1.13
PACS2-203ENST00000447393 FRAT2O75474 233 aaPredicted RBP22.13■■□□□ 1.13
PACS2-203ENST00000447393 CCDC88BA6NC98 1476 aa22.12■■□□□ 1.13
PACS2-203ENST00000447393 NOL8Q76FK4 1167 aaKnown RBP22.12■■□□□ 1.13
PACS2-203ENST00000447393 TOMM22Q9NS69 142 aa22.11■■□□□ 1.13
PACS2-203ENST00000447393 RBM19Q9Y4C8 960 aaKnown RBP22.09■■□□□ 1.13
PACS2-203ENST00000447393 LMOD3Q0VAK6 560 aa22.09■■□□□ 1.13
PACS2-203ENST00000447393 RASSF8Q8NHQ8 419 aa22.08■■□□□ 1.13
PACS2-203ENST00000447393 CENPJQ9HC77 1338 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms