RNA–Protein interactions for RNA: ENST00000445654.2

SHANK2-209, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 522 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-209ENST00000445654 ARHGEF12Q9NZN5 1544 aa23.62■■□□□ 1.37
SHANK2-209ENST00000445654 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
SHANK2-209ENST00000445654 SIGLEC1Q9BZZ2 1709 aa23.61■■□□□ 1.37
SHANK2-209ENST00000445654 ATP10AO60312 1499 aa23.6■■□□□ 1.37
SHANK2-209ENST00000445654 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
SHANK2-209ENST00000445654 SCAPERQ9BY12 1400 aa23.59■■□□□ 1.37
SHANK2-209ENST00000445654 ILDR2Q71H61 639 aa23.56■■□□□ 1.36
SHANK2-209ENST00000445654 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
SHANK2-209ENST00000445654 PLCH2O75038 1416 aa23.55■■□□□ 1.36
SHANK2-209ENST00000445654 SPATA31D1Q6ZQQ2 1576 aa23.52■■□□□ 1.36
SHANK2-209ENST00000445654 SETD1BQ9UPS6 1966 aaKnown RBP23.52■■□□□ 1.36
SHANK2-209ENST00000445654 STRCQ7RTU9 1775 aa23.51■■□□□ 1.35
SHANK2-209ENST00000445654 EEA1Q15075 1411 aa23.5■■□□□ 1.35
SHANK2-209ENST00000445654 EFCAB2Q5VUJ9 269 aa23.5■■□□□ 1.35
SHANK2-209ENST00000445654 PTPRTO14522 1441 aa23.5■■□□□ 1.35
SHANK2-209ENST00000445654 RANGAP1P46060 587 aaPredicted RBP23.48■■□□□ 1.35
SHANK2-209ENST00000445654 ZNF518AQ6AHZ1 1483 aa23.48■■□□□ 1.35
SHANK2-209ENST00000445654 IQSEC2Q5JU85 1478 aa23.47■■□□□ 1.35
SHANK2-209ENST00000445654 MYO5CQ9NQX4 1742 aa23.47■■□□□ 1.35
SHANK2-209ENST00000445654 CEBPAP49715 358 aaPredicted RBP23.46■■□□□ 1.35
SHANK2-209ENST00000445654 CDK11AQ9UQ88 783 aaPredicted RBP23.44■■□□□ 1.34
SHANK2-209ENST00000445654 CDK13Q14004 1512 aaKnown RBP23.43■■□□□ 1.34
SHANK2-209ENST00000445654 REREQ9P2R6 1566 aa23.41■■□□□ 1.34
SHANK2-209ENST00000445654 ESF1Q9H501 851 aaKnown RBP23.41■■□□□ 1.34
SHANK2-209ENST00000445654 KDM5CP41229 1560 aa23.4■■□□□ 1.34
SHANK2-209ENST00000445654 MYT1LQ9UL68 1186 aa23.38■■□□□ 1.33
SHANK2-209ENST00000445654 KIF14Q15058 1648 aa23.36■■□□□ 1.33
SHANK2-209ENST00000445654 C3P01024 1663 aa23.35■■□□□ 1.33
SHANK2-209ENST00000445654 FMN1Q68DA7 1419 aa23.34■■□□□ 1.33
SHANK2-209ENST00000445654 TRAPPC8Q9Y2L5 1435 aa23.34■■□□□ 1.33
SHANK2-209ENST00000445654 ARHGAP5Q13017 1502 aa23.34■■□□□ 1.33
SHANK2-209ENST00000445654 DIP2CQ9Y2E4 1556 aa23.34■■□□□ 1.33
SHANK2-209ENST00000445654 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.33
SHANK2-209ENST00000445654 AGLP35573 1532 aa23.33■■□□□ 1.32
SHANK2-209ENST00000445654 CLIP1P30622 1438 aa23.33■■□□□ 1.32
SHANK2-209ENST00000445654 CNTLNQ9NXG0 1405 aa23.32■■□□□ 1.32
SHANK2-209ENST00000445654 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
SHANK2-209ENST00000445654 AFAP1Q8N556 730 aa23.3■■□□□ 1.32
SHANK2-209ENST00000445654 NCOA1Q15788 1441 aa23.29■■□□□ 1.32
SHANK2-209ENST00000445654 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
SHANK2-209ENST00000445654 TROQ12816 1431 aaPredicted RBP23.28■■□□□ 1.32
SHANK2-209ENST00000445654 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
SHANK2-209ENST00000445654 NPATQ14207 1427 aa23.23■■□□□ 1.31
SHANK2-209ENST00000445654 MROH2AA6NES4 1674 aa23.21■■□□□ 1.31
SHANK2-209ENST00000445654 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
SHANK2-209ENST00000445654 CDC42BPBQ9Y5S2 1711 aa23.18■■□□□ 1.3
SHANK2-209ENST00000445654 ABCC1P33527 1531 aa23.18■■□□□ 1.3
SHANK2-209ENST00000445654 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
SHANK2-209ENST00000445654 PREX2Q70Z35 1606 aa23.16■■□□□ 1.3
SHANK2-209ENST00000445654 ITSN2Q9NZM3 1697 aa23.16■■□□□ 1.3
SHANK2-209ENST00000445654 PKD2Q13563 968 aa23.14■■□□□ 1.29
SHANK2-209ENST00000445654 PLA2R1Q13018 1463 aa23.13■■□□□ 1.29
SHANK2-209ENST00000445654 KIDINS220Q9ULH0 1771 aa23.13■■□□□ 1.29
SHANK2-209ENST00000445654 ARHGAP35Q9NRY4 1499 aa23.11■■□□□ 1.29
SHANK2-209ENST00000445654 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
SHANK2-209ENST00000445654 ZMYM3Q14202 1370 aa23.1■■□□□ 1.29
SHANK2-209ENST00000445654 ZNF142P52746 1687 aaPredicted RBP23.09■■□□□ 1.29
SHANK2-209ENST00000445654 ZNF335Q9H4Z2 1342 aaPredicted RBP23.08■■□□□ 1.29
SHANK2-209ENST00000445654 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
SHANK2-209ENST00000445654 NCKAP5LQ9HCH0 1330 aa23.08■■□□□ 1.28
SHANK2-209ENST00000445654 SUPT6HQ7KZ85 1726 aaKnown RBP23.07■■□□□ 1.28
SHANK2-209ENST00000445654 MYO3AQ8NEV4 1616 aa23.04■■□□□ 1.28
SHANK2-209ENST00000445654 TCOF1Q13428 1488 aaKnown RBP23.04■■□□□ 1.28
SHANK2-209ENST00000445654 LRRIQ1Q96JM4 1722 aa23.03■■□□□ 1.28
SHANK2-209ENST00000445654 SAMD9LQ8IVG5 1584 aa23.03■■□□□ 1.28
SHANK2-209ENST00000445654 CEP170BQ9Y4F5 1589 aaPredicted RBP23.02■■□□□ 1.28
SHANK2-209ENST00000445654 SPAG9O60271 1321 aaKnown RBP23.02■■□□□ 1.28
SHANK2-209ENST00000445654 PPP6R1Q9UPN7 881 aa23.01■■□□□ 1.27
SHANK2-209ENST00000445654 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
SHANK2-209ENST00000445654 CLTCQ00610 1675 aaKnown RBP23■■□□□ 1.27
SHANK2-209ENST00000445654 TOM1O60784 492 aa22.98■■□□□ 1.27
SHANK2-209ENST00000445654 PTPRKQ15262 1439 aa22.97■■□□□ 1.27
SHANK2-209ENST00000445654 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
SHANK2-209ENST00000445654 CASKIN1Q8WXD9 1431 aa22.96■■□□□ 1.27
SHANK2-209ENST00000445654 PLEKHH2Q8IVE3 1493 aa22.96■■□□□ 1.27
SHANK2-209ENST00000445654 PLXNC1O60486 1568 aa22.95■■□□□ 1.26
SHANK2-209ENST00000445654 CPS1P31327 1500 aa22.95■■□□□ 1.26
SHANK2-209ENST00000445654 ATP7AQ04656 1500 aa22.95■■□□□ 1.26
SHANK2-209ENST00000445654 SYCP2Q9BX26 1530 aa22.94■■□□□ 1.26
SHANK2-209ENST00000445654 A2MP01023 1474 aa22.94■■□□□ 1.26
SHANK2-209ENST00000445654 ZNF777Q9ULD5 760 aaPredicted RBP22.94■■□□□ 1.26
SHANK2-209ENST00000445654 SCAF1Q9H7N4 1312 aaKnown RBP22.93■■□□□ 1.26
SHANK2-209ENST00000445654 KIAA1107Q9UPP5 1409 aa22.92■■□□□ 1.26
SHANK2-209ENST00000445654 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
SHANK2-209ENST00000445654 INO80Q9ULG1 1556 aaPredicted RBP22.9■■□□□ 1.26
SHANK2-209ENST00000445654 HSPA1LP34931 641 aa22.9■■□□□ 1.26
SHANK2-209ENST00000445654 GGT6Q6P531 493 aa22.89■■□□□ 1.25
SHANK2-209ENST00000445654 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.25
SHANK2-209ENST00000445654 ADGBQ8N7X0 1667 aa22.87■■□□□ 1.25
SHANK2-209ENST00000445654 HNRNPMP52272 730 aaKnown RBP eCLIP22.87■■□□□ 1.254e-9■■■■■ 39.3
SHANK2-209ENST00000445654 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
SHANK2-209ENST00000445654 PHF23Q9BUL5 403 aaPredicted RBP22.87■■□□□ 1.25
SHANK2-209ENST00000445654 POLR1AO95602 1720 aaPredicted RBP22.87■■□□□ 1.25
SHANK2-209ENST00000445654 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
SHANK2-209ENST00000445654 DNMT1P26358 1616 aaKnown RBP22.86■■□□□ 1.25
SHANK2-209ENST00000445654 FYCO1Q9BQS8 1478 aa22.86■■□□□ 1.25
SHANK2-209ENST00000445654 SHANK2Q9UPX8 1470 aa22.85■■□□□ 1.25
SHANK2-209ENST00000445654 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.25
SHANK2-209ENST00000445654 FAM135AQ9P2D6 1515 aa22.81■■□□□ 1.24
SHANK2-209ENST00000445654 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms