RNA–Protein interactions for RNA: ENST00000444897.2

PMPCA-204, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-204ENST00000444897 C11orf95C9JLR9 678 aaPredicted RBP22.49■■□□□ 1.19
PMPCA-204ENST00000444897 WDR62O43379 1518 aa22.48■■□□□ 1.19
PMPCA-204ENST00000444897 FOXD1Q16676 465 aa22.48■■□□□ 1.19
PMPCA-204ENST00000444897 PPP4R2Q9NY27 417 aa22.47■■□□□ 1.19
PMPCA-204ENST00000444897 RPRD2Q5VT52 1461 aaKnown RBP22.46■■□□□ 1.19
PMPCA-204ENST00000444897 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
PMPCA-204ENST00000444897 ANKRD30BQ9BXX2 1392 aa22.45■■□□□ 1.18
PMPCA-204ENST00000444897 ROCK1Q13464 1354 aa22.44■■□□□ 1.18
PMPCA-204ENST00000444897 FAM9BQ8IZU0 186 aa22.44■■□□□ 1.18
PMPCA-204ENST00000444897 MRS2Q9HD23 443 aa22.44■■□□□ 1.18
PMPCA-204ENST00000444897 TEX14Q8IWB6 1497 aa22.44■■□□□ 1.18
PMPCA-204ENST00000444897 DAPK1P53355 1430 aa22.43■■□□□ 1.18
PMPCA-204ENST00000444897 ZBED9Q6R2W3 1325 aa22.43■■□□□ 1.18
PMPCA-204ENST00000444897 NBPF8Q3BBV2 869 aa22.42■■□□□ 1.18
PMPCA-204ENST00000444897 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
PMPCA-204ENST00000444897 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
PMPCA-204ENST00000444897 ARID3CA6NKF2 412 aa22.4■■□□□ 1.18
PMPCA-204ENST00000444897 POLR1AO95602 1720 aaPredicted RBP22.39■■□□□ 1.18
PMPCA-204ENST00000444897 DNMT1P26358 1616 aaKnown RBP22.39■■□□□ 1.18
PMPCA-204ENST00000444897 SPATA31E1Q6ZUB1 1445 aa22.38■■□□□ 1.17
PMPCA-204ENST00000444897 KIF7Q2M1P5 1343 aa22.38■■□□□ 1.17
PMPCA-204ENST00000444897 ABCC5O15440 1437 aa22.37■■□□□ 1.17
PMPCA-204ENST00000444897 ERICH6Q7L0X2 663 aa22.35■■□□□ 1.17
PMPCA-204ENST00000444897 SLC4A1APQ9BWU0 796 aaKnown RBP22.34■■□□□ 1.17
PMPCA-204ENST00000444897 B4GALNT3Q6L9W6 998 aa22.3■■□□□ 1.16
PMPCA-204ENST00000444897 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
PMPCA-204ENST00000444897 PZPP20742 1482 aa22.26■■□□□ 1.15
PMPCA-204ENST00000444897 KIAA0556O60303 1618 aa22.26■■□□□ 1.15
PMPCA-204ENST00000444897 NUP153P49790 1475 aaKnown RBP22.26■■□□□ 1.15
PMPCA-204ENST00000444897 MBD5Q9P267 1494 aa22.23■■□□□ 1.15
PMPCA-204ENST00000444897 SMG6Q86US8 1419 aaKnown RBP22.23■■□□□ 1.15
PMPCA-204ENST00000444897 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
PMPCA-204ENST00000444897 DISP1Q96F81 1524 aa22.23■■□□□ 1.15
PMPCA-204ENST00000444897 DHX29Q7Z478 1369 aaKnown RBP22.23■■□□□ 1.15
PMPCA-204ENST00000444897 KIAA0586Q9BVV6 1533 aa22.2■■□□□ 1.15
PMPCA-204ENST00000444897 CAMSAP2Q08AD1 1489 aa22.19■■□□□ 1.14
PMPCA-204ENST00000444897 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
PMPCA-204ENST00000444897 USP47Q96K76 1375 aa22.19■■□□□ 1.14
PMPCA-204ENST00000444897 KIAA1107Q9UPP5 1409 aa22.18■■□□□ 1.14
PMPCA-204ENST00000444897 BCORL1Q5H9F3 1711 aa22.18■■□□□ 1.14
PMPCA-204ENST00000444897 MRC2Q9UBG0 1479 aa22.17■■□□□ 1.14
PMPCA-204ENST00000444897 KIF14Q15058 1648 aa22.17■■□□□ 1.14
PMPCA-204ENST00000444897 NUDCQ9Y266 331 aa22.16■■□□□ 1.14
PMPCA-204ENST00000444897 ITSN2Q9NZM3 1697 aa22.15■■□□□ 1.14
PMPCA-204ENST00000444897 TROQ12816 1431 aaPredicted RBP22.15■■□□□ 1.14
PMPCA-204ENST00000444897 CFDP1Q9UEE9 299 aaPredicted RBP22.14■■□□□ 1.13
PMPCA-204ENST00000444897 ARID4BQ4LE39 1312 aaPredicted RBP22.14■■□□□ 1.13
PMPCA-204ENST00000444897 KDM5CP41229 1560 aa22.13■■□□□ 1.13
PMPCA-204ENST00000444897 PRG4Q92954 1404 aaPredicted RBP22.13■■□□□ 1.13
PMPCA-204ENST00000444897 POLR3GLQ9BT43 218 aa22.13■■□□□ 1.13
PMPCA-204ENST00000444897 ADGRL2O95490 1459 aa22.13■■□□□ 1.13
PMPCA-204ENST00000444897 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
PMPCA-204ENST00000444897 RNF123Q5XPI4 1314 aa22.12■■□□□ 1.13
PMPCA-204ENST00000444897 CNGB1Q14028 1251 aaPredicted RBP22.12■■□□□ 1.13
PMPCA-204ENST00000444897 ZNF608Q9ULD9 1512 aaPredicted RBP22.11■■□□□ 1.13
PMPCA-204ENST00000444897 CROCC2H7BZ55 1655 aa22.11■■□□□ 1.13
PMPCA-204ENST00000444897 PKD2Q13563 968 aa22.1■■□□□ 1.13
PMPCA-204ENST00000444897 MYT1LQ9UL68 1186 aa22.1■■□□□ 1.13
PMPCA-204ENST00000444897 IFT140Q96RY7 1462 aa22.1■■□□□ 1.13
PMPCA-204ENST00000444897 GPATCH8Q9UKJ3 1502 aaKnown RBP22.09■■□□□ 1.13
PMPCA-204ENST00000444897 ROCK2O75116 1388 aaKnown RBP22.08■■□□□ 1.13
PMPCA-204ENST00000444897 ANKRD30AQ9BXX3 1397 aa22.07■■□□□ 1.12
PMPCA-204ENST00000444897 ADCY10Q96PN6 1610 aa22.07■■□□□ 1.12
PMPCA-204ENST00000444897 GRIN2AQ12879 1464 aa22.06■■□□□ 1.12
PMPCA-204ENST00000444897 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
PMPCA-204ENST00000444897 RALGAPBQ86X10 1494 aa22.06■■□□□ 1.12
PMPCA-204ENST00000444897 ZNF777Q9ULD5 760 aaPredicted RBP22.06■■□□□ 1.12
PMPCA-204ENST00000444897 CCDC136Q96JN2 1154 aa22.05■■□□□ 1.12
PMPCA-204ENST00000444897 PNISRQ8TF01 805 aaKnown RBP22.05■■□□□ 1.12
PMPCA-204ENST00000444897 NOP58Q9Y2X3 529 aaKnown RBP22.04■■□□□ 1.12
PMPCA-204ENST00000444897 ANKRD50Q9ULJ7 1429 aa22.03■■□□□ 1.12
PMPCA-204ENST00000444897 TMC1Q8TDI8 760 aa22.02■■□□□ 1.12
PMPCA-204ENST00000444897 PLB1Q6P1J6 1458 aa22.01■■□□□ 1.11
PMPCA-204ENST00000444897 KIF15Q9NS87 1388 aa22■■□□□ 1.11
PMPCA-204ENST00000444897 ARHGEF12Q9NZN5 1544 aa22■■□□□ 1.11
PMPCA-204ENST00000444897 CARD11Q9BXL7 1154 aa22■■□□□ 1.11
PMPCA-204ENST00000444897 NUP155O75694 1391 aa21.97■■□□□ 1.11
PMPCA-204ENST00000444897 LRPPRCP42704 1394 aaKnown RBP21.96■■□□□ 1.11
PMPCA-204ENST00000444897 SENP3-EIF4A1A0A087X0R7 540 aa21.96■■□□□ 1.11
PMPCA-204ENST00000444897 EIF4G3O43432 1585 aaKnown RBP21.96■■□□□ 1.11
PMPCA-204ENST00000444897 SHANK2Q9UPX8 1470 aa21.95■■□□□ 1.1
PMPCA-204ENST00000444897 BRD4O60885 1362 aaPredicted RBP21.95■■□□□ 1.1
PMPCA-204ENST00000444897 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
PMPCA-204ENST00000444897 PAK3O75914 559 aaPredicted RBP21.94■■□□□ 1.1
PMPCA-204ENST00000444897 KDM5DQ9BY66 1539 aa21.93■■□□□ 1.1
PMPCA-204ENST00000444897 MYBBP1AQ9BQG0 1328 aaKnown RBP21.93■■□□□ 1.1
PMPCA-204ENST00000444897 CDC42BPAQ5VT25 1732 aa21.93■■□□□ 1.1
PMPCA-204ENST00000444897 C9orf84Q5VXU9 1444 aa21.93■■□□□ 1.1
PMPCA-204ENST00000444897 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
PMPCA-204ENST00000444897 DEKP35659 375 aaKnown RBP21.92■■□□□ 1.1
PMPCA-204ENST00000444897 ST20-MTHFSA0A0A6YYL1 179 aa21.91■■□□□ 1.1
PMPCA-204ENST00000444897 RALBP1Q15311 655 aa21.91■■□□□ 1.1
PMPCA-204ENST00000444897 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
PMPCA-204ENST00000444897 E9PCH4 1651 aa21.9■■□□□ 1.1
PMPCA-204ENST00000444897 IPO9Q96P70 1041 aaKnown RBP21.89■■□□□ 1.1
PMPCA-204ENST00000444897 KDM2AQ9Y2K7 1162 aa21.89■■□□□ 1.1
PMPCA-204ENST00000444897 CARMIL2Q6F5E8 1435 aa21.88■■□□□ 1.09
PMPCA-204ENST00000444897 MAGI1Q96QZ7 1491 aaPredicted RBP21.88■■□□□ 1.09
PMPCA-204ENST00000444897 ABCC10Q5T3U5 1492 aa21.87■■□□□ 1.09
PMPCA-204ENST00000444897 NBR1Q14596 966 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms