RNA–Protein interactions for RNA: ENST00000443896.5

PIKFYVE-206, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best)

Gene PIKFYVE, Length 3,282 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-206ENST00000443896 PRG4Q92954 1404 aaPredicted RBP23.21■■□□□ 1.31
PIKFYVE-206ENST00000443896 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
PIKFYVE-206ENST00000443896 DENND4BO75064 1496 aaPredicted RBP23.2■■□□□ 1.3
PIKFYVE-206ENST00000443896 ABCC5O15440 1437 aa23.2■■□□□ 1.3
PIKFYVE-206ENST00000443896 ABCA8O94911 1581 aa23.17■■□□□ 1.3
PIKFYVE-206ENST00000443896 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
PIKFYVE-206ENST00000443896 ZNF644Q9H582 1327 aaPredicted RBP23.15■■□□□ 1.3
PIKFYVE-206ENST00000443896 KDM5BQ9UGL1 1544 aa23.15■■□□□ 1.3
PIKFYVE-206ENST00000443896 KIF14Q15058 1648 aa23.14■■□□□ 1.29
PIKFYVE-206ENST00000443896 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
PIKFYVE-206ENST00000443896 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
PIKFYVE-206ENST00000443896 CAMSAP2Q08AD1 1489 aa23.12■■□□□ 1.29
PIKFYVE-206ENST00000443896 MPHOSPH9Q99550 1183 aa23.09■■□□□ 1.29
PIKFYVE-206ENST00000443896 CFDP1Q9UEE9 299 aaPredicted RBP23.08■■□□□ 1.29
PIKFYVE-206ENST00000443896 ATP10BO94823 1461 aa23.07■■□□□ 1.28
PIKFYVE-206ENST00000443896 PRKCSHP14314 528 aaPredicted RBP23.06■■□□□ 1.28
PIKFYVE-206ENST00000443896 ADGBQ8N7X0 1667 aa23.04■■□□□ 1.28
PIKFYVE-206ENST00000443896 DDX10Q13206 875 aaKnown RBP23.04■■□□□ 1.28
PIKFYVE-206ENST00000443896 CROCC2H7BZ55 1655 aa23.03■■□□□ 1.28
PIKFYVE-206ENST00000443896 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
PIKFYVE-206ENST00000443896 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.28
PIKFYVE-206ENST00000443896 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
PIKFYVE-206ENST00000443896 ADGRL2O95490 1459 aa23.02■■□□□ 1.28
PIKFYVE-206ENST00000443896 CHD1O14646 1710 aa23.01■■□□□ 1.27
PIKFYVE-206ENST00000443896 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
PIKFYVE-206ENST00000443896 CDC42BPAQ5VT25 1732 aa23■■□□□ 1.27
PIKFYVE-206ENST00000443896 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
PIKFYVE-206ENST00000443896 PTPRGP23470 1445 aa22.99■■□□□ 1.27
PIKFYVE-206ENST00000443896 SUPT16HQ9Y5B9 1047 aaKnown RBP22.98■■□□□ 1.27
PIKFYVE-206ENST00000443896 ANKRD30BQ9BXX2 1392 aa22.98■■□□□ 1.27
PIKFYVE-206ENST00000443896 SHROOM2Q13796 1616 aa22.96■■□□□ 1.27
PIKFYVE-206ENST00000443896 ZNF777Q9ULD5 760 aaPredicted RBP22.95■■□□□ 1.26
PIKFYVE-206ENST00000443896 FOXD1Q16676 465 aa22.94■■□□□ 1.26
PIKFYVE-206ENST00000443896 RPRD2Q5VT52 1461 aaKnown RBP22.94■■□□□ 1.26
PIKFYVE-206ENST00000443896 BCANQ96GW7 911 aa22.93■■□□□ 1.26
PIKFYVE-206ENST00000443896 PZPP20742 1482 aa22.92■■□□□ 1.26
PIKFYVE-206ENST00000443896 SHANK2Q9UPX8 1470 aa22.92■■□□□ 1.26
PIKFYVE-206ENST00000443896 ANKRD30AQ9BXX3 1397 aa22.92■■□□□ 1.26
PIKFYVE-206ENST00000443896 SLC4A1APQ9BWU0 796 aaKnown RBP22.91■■□□□ 1.26
PIKFYVE-206ENST00000443896 L3MBTL2Q969R5 705 aa22.89■■□□□ 1.26
PIKFYVE-206ENST00000443896 KCNH8Q96L42 1107 aa22.88■■□□□ 1.25
PIKFYVE-206ENST00000443896 TEX14Q8IWB6 1497 aa22.88■■□□□ 1.25
PIKFYVE-206ENST00000443896 C9orf84Q5VXU9 1444 aa22.85■■□□□ 1.25
PIKFYVE-206ENST00000443896 ANKRD50Q9ULJ7 1429 aa22.84■■□□□ 1.25
PIKFYVE-206ENST00000443896 ARHGEF5Q12774 1597 aa22.84■■□□□ 1.25
PIKFYVE-206ENST00000443896 CCER2I3L3R5 266 aa22.82■■□□□ 1.24
PIKFYVE-206ENST00000443896 ANP32CO43423 234 aa22.82■■□□□ 1.24
PIKFYVE-206ENST00000443896 HSPA5P11021 654 aaKnown RBP22.82■■□□□ 1.24
PIKFYVE-206ENST00000443896 PREX2Q70Z35 1606 aa22.81■■□□□ 1.24
PIKFYVE-206ENST00000443896 KIAA1107Q9UPP5 1409 aa22.81■■□□□ 1.24
PIKFYVE-206ENST00000443896 MBD5Q9P267 1494 aa22.8■■□□□ 1.24
PIKFYVE-206ENST00000443896 CDC42BPBQ9Y5S2 1711 aa22.8■■□□□ 1.24
PIKFYVE-206ENST00000443896 EIF4G2P78344 907 aaKnown RBP eCLIP22.79■■□□□ 1.24
PIKFYVE-206ENST00000443896 ERCC6L2Q5T890 1561 aa22.79■■□□□ 1.24
PIKFYVE-206ENST00000443896 SAMD9LQ8IVG5 1584 aa22.78■■□□□ 1.24
PIKFYVE-206ENST00000443896 ABCC2Q92887 1545 aa22.78■■□□□ 1.24
PIKFYVE-206ENST00000443896 TSPY4P0CV99 314 aa22.77■■□□□ 1.24
PIKFYVE-206ENST00000443896 TSPY10P0CW01 314 aa22.77■■□□□ 1.24
PIKFYVE-206ENST00000443896 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
PIKFYVE-206ENST00000443896 NBPF8Q3BBV2 869 aa22.75■■□□□ 1.23
PIKFYVE-206ENST00000443896 WASHC2AQ641Q2 1341 aa22.75■■□□□ 1.23
PIKFYVE-206ENST00000443896 HNRNPMP52272 730 aaKnown RBP eCLIP22.74■■□□□ 1.233e-7■■■■□ 24
PIKFYVE-206ENST00000443896 CCDC141Q6ZP82 1450 aa22.74■■□□□ 1.23
PIKFYVE-206ENST00000443896 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
PIKFYVE-206ENST00000443896 PKD2Q13563 968 aa22.72■■□□□ 1.23
PIKFYVE-206ENST00000443896 TTC37Q6PGP7 1564 aa22.72■■□□□ 1.23
PIKFYVE-206ENST00000443896 KIF15Q9NS87 1388 aa22.72■■□□□ 1.23
PIKFYVE-206ENST00000443896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.72■■□□□ 1.23
PIKFYVE-206ENST00000443896 RSPH4AQ5TD94 716 aa22.71■■□□□ 1.23
PIKFYVE-206ENST00000443896 NUP155O75694 1391 aa22.7■■□□□ 1.22
PIKFYVE-206ENST00000443896 SPATA31E1Q6ZUB1 1445 aa22.68■■□□□ 1.22
PIKFYVE-206ENST00000443896 ARHGAP5Q13017 1502 aa22.66■■□□□ 1.22
PIKFYVE-206ENST00000443896 MAST1Q9Y2H9 1570 aa22.66■■□□□ 1.22
PIKFYVE-206ENST00000443896 SYCP2Q9BX26 1530 aa22.66■■□□□ 1.22
PIKFYVE-206ENST00000443896 UHRF1BP1LA0JNW5 1464 aa22.65■■□□□ 1.22
PIKFYVE-206ENST00000443896 MYO5CQ9NQX4 1742 aa22.65■■□□□ 1.22
PIKFYVE-206ENST00000443896 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
PIKFYVE-206ENST00000443896 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
PIKFYVE-206ENST00000443896 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
PIKFYVE-206ENST00000443896 C11orf95C9JLR9 678 aaPredicted RBP22.61■■□□□ 1.21
PIKFYVE-206ENST00000443896 PLEKHH2Q8IVE3 1493 aa22.61■■□□□ 1.21
PIKFYVE-206ENST00000443896 POLR1AO95602 1720 aaPredicted RBP22.61■■□□□ 1.21
PIKFYVE-206ENST00000443896 ARHGEF12Q9NZN5 1544 aa22.58■■□□□ 1.2
PIKFYVE-206ENST00000443896 UHRF1BP1Q6BDS2 1440 aa22.58■■□□□ 1.2
PIKFYVE-206ENST00000443896 FAM135AQ9P2D6 1515 aa22.57■■□□□ 1.2
PIKFYVE-206ENST00000443896 PLXNC1O60486 1568 aa22.57■■□□□ 1.2
PIKFYVE-206ENST00000443896 PLCH2O75038 1416 aa22.55■■□□□ 1.2
PIKFYVE-206ENST00000443896 UNC13BO14795 1591 aa22.55■■□□□ 1.2
PIKFYVE-206ENST00000443896 KIF7Q2M1P5 1343 aa22.53■■□□□ 1.2
PIKFYVE-206ENST00000443896 RALGAPBQ86X10 1494 aa22.51■■□□□ 1.19
PIKFYVE-206ENST00000443896 KDM5CP41229 1560 aa22.5■■□□□ 1.19
PIKFYVE-206ENST00000443896 USP47Q96K76 1375 aa22.5■■□□□ 1.19
PIKFYVE-206ENST00000443896 DUOX2Q9NRD8 1548 aa22.48■■□□□ 1.19
PIKFYVE-206ENST00000443896 ABCC1P33527 1531 aa22.48■■□□□ 1.19
PIKFYVE-206ENST00000443896 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
PIKFYVE-206ENST00000443896 RBM19Q9Y4C8 960 aaKnown RBP22.46■■□□□ 1.19
PIKFYVE-206ENST00000443896 IQGAP3Q86VI3 1631 aa22.46■■□□□ 1.19
PIKFYVE-206ENST00000443896 EFCAB2Q5VUJ9 269 aa22.46■■□□□ 1.19
PIKFYVE-206ENST00000443896 FKBP8Q14318 412 aa22.46■■□□□ 1.19
PIKFYVE-206ENST00000443896 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms