RNA–Protein interactions for RNA: ENST00000442398.6

C2CD3-207, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 3,951 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-207ENST00000442398 ADGBQ8N7X0 1667 aa8.57□□□□□ -1.04
C2CD3-207ENST00000442398 DNMT1P26358 1616 aaKnown RBP8.56□□□□□ -1.04
C2CD3-207ENST00000442398 RAPGEF6Q8TEU7 1601 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 TIMELESSQ9UNS1 1208 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 POLR1AO95602 1720 aaPredicted RBP8.56□□□□□ -1.04
C2CD3-207ENST00000442398 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 DISP1Q96F81 1524 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 SENP3-EIF4A1A0A087X0R7 540 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 MPHOSPH9Q99550 1183 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 EPRSP07814 1512 aaKnown RBP8.56□□□□□ -1.04
C2CD3-207ENST00000442398 MIA2Q96PC5 1412 aa8.56□□□□□ -1.04
C2CD3-207ENST00000442398 EIF4G2P78344 907 aaKnown RBP eCLIP8.55□□□□□ -1.04
C2CD3-207ENST00000442398 HNRNPUQ00839 825 aaKnown RBP eCLIP8.55□□□□□ -1.04
C2CD3-207ENST00000442398 ERICH6Q7L0X2 663 aa8.55□□□□□ -1.04
C2CD3-207ENST00000442398 KIAA0586Q9BVV6 1533 aa8.55□□□□□ -1.04
C2CD3-207ENST00000442398 FAM9BQ8IZU0 186 aa8.55□□□□□ -1.04
C2CD3-207ENST00000442398 MAGI1Q96QZ7 1491 aaPredicted RBP8.55□□□□□ -1.04
C2CD3-207ENST00000442398 UACAQ9BZF9 1416 aa8.54□□□□□ -1.04
C2CD3-207ENST00000442398 FKBP8Q14318 412 aa8.54□□□□□ -1.04
C2CD3-207ENST00000442398 RGL3Q3MIN7 710 aa8.54□□□□□ -1.04
C2CD3-207ENST00000442398 PTPRKQ15262 1439 aa8.53□□□□□ -1.04
C2CD3-207ENST00000442398 ZNF608Q9ULD9 1512 aaPredicted RBP8.53□□□□□ -1.04
C2CD3-207ENST00000442398 GRIN2AQ12879 1464 aa8.53□□□□□ -1.04
C2CD3-207ENST00000442398 CEP170Q5SW79 1584 aa8.53□□□□□ -1.04
C2CD3-207ENST00000442398 NAIPQ13075 1403 aa8.53□□□□□ -1.04
C2CD3-207ENST00000442398 DENND4BO75064 1496 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-207ENST00000442398 L3MBTL2Q969R5 705 aa8.52□□□□□ -1.05
C2CD3-207ENST00000442398 HSPA5P11021 654 aaKnown RBP8.52□□□□□ -1.05
C2CD3-207ENST00000442398 HNRNPMP52272 730 aaKnown RBP eCLIP8.51□□□□□ -1.05
C2CD3-207ENST00000442398 CARMIL2Q6F5E8 1435 aa8.51□□□□□ -1.05
C2CD3-207ENST00000442398 PKD2Q13563 968 aa8.5□□□□□ -1.05
C2CD3-207ENST00000442398 IRX6P78412 446 aaPredicted RBP8.5□□□□□ -1.05
C2CD3-207ENST00000442398 CDK13Q14004 1512 aaKnown RBP8.5□□□□□ -1.05
C2CD3-207ENST00000442398 NUP160Q12769 1436 aa8.49□□□□□ -1.05
C2CD3-207ENST00000442398 NUP153P49790 1475 aaKnown RBP8.49□□□□□ -1.05
C2CD3-207ENST00000442398 KDM6BO15054 1643 aa8.49□□□□□ -1.05
C2CD3-207ENST00000442398 MRS2Q9HD23 443 aa8.48□□□□□ -1.05
C2CD3-207ENST00000442398 ABCA8O94911 1581 aa8.48□□□□□ -1.05
C2CD3-207ENST00000442398 ROCK1Q13464 1354 aa8.48□□□□□ -1.05
C2CD3-207ENST00000442398 SYNJ2O15056 1496 aa8.48□□□□□ -1.05
C2CD3-207ENST00000442398 SHROOM2Q13796 1616 aa8.47□□□□□ -1.05
C2CD3-207ENST00000442398 ADGRL2O95490 1459 aa8.47□□□□□ -1.05
C2CD3-207ENST00000442398 CDC42BPAQ5VT25 1732 aa8.47□□□□□ -1.05
C2CD3-207ENST00000442398 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
C2CD3-207ENST00000442398 SENP3Q9H4L4 574 aaPredicted RBP8.46□□□□□ -1.06
C2CD3-207ENST00000442398 PRG4Q92954 1404 aaPredicted RBP8.46□□□□□ -1.06
C2CD3-207ENST00000442398 DCAF11Q8TEB1 546 aa8.46□□□□□ -1.06
C2CD3-207ENST00000442398 KDM5DQ9BY66 1539 aa8.45□□□□□ -1.06
C2CD3-207ENST00000442398 NUP155O75694 1391 aa8.45□□□□□ -1.06
C2CD3-207ENST00000442398 CARD11Q9BXL7 1154 aa8.45□□□□□ -1.06
C2CD3-207ENST00000442398 SUPT16HQ9Y5B9 1047 aaKnown RBP8.45□□□□□ -1.06
C2CD3-207ENST00000442398 SHANK2Q9UPX8 1470 aa8.44□□□□□ -1.06
C2CD3-207ENST00000442398 CHGAP10645 457 aaKnown RBP8.44□□□□□ -1.06
C2CD3-207ENST00000442398 PTPRGP23470 1445 aa8.43□□□□□ -1.06
C2CD3-207ENST00000442398 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
C2CD3-207ENST00000442398 KIF14Q15058 1648 aa8.42□□□□□ -1.06
C2CD3-207ENST00000442398 ARHGEF5Q12774 1597 aa8.42□□□□□ -1.06
C2CD3-207ENST00000442398 DAPK1P53355 1430 aa8.42□□□□□ -1.06
C2CD3-207ENST00000442398 PLB1Q6P1J6 1458 aa8.42□□□□□ -1.06
C2CD3-207ENST00000442398 ANKRD30AQ9BXX3 1397 aa8.42□□□□□ -1.06
C2CD3-207ENST00000442398 NPM1P06748 294 aaKnown RBP eCLIP8.41□□□□□ -1.06
C2CD3-207ENST00000442398 TMC1Q8TDI8 760 aa8.41□□□□□ -1.06
C2CD3-207ENST00000442398 MBD5Q9P267 1494 aa8.41□□□□□ -1.06
C2CD3-207ENST00000442398 TEX14Q8IWB6 1497 aa8.41□□□□□ -1.06
C2CD3-207ENST00000442398 ABCC10Q5T3U5 1492 aa8.4□□□□□ -1.06
C2CD3-207ENST00000442398 PREX2Q70Z35 1606 aa8.4□□□□□ -1.06
C2CD3-207ENST00000442398 TROQ12816 1431 aaPredicted RBP8.4□□□□□ -1.06
C2CD3-207ENST00000442398 MAST1Q9Y2H9 1570 aa8.4□□□□□ -1.06
C2CD3-207ENST00000442398 ABCC5O15440 1437 aa8.39□□□□□ -1.07
C2CD3-207ENST00000442398 CAMSAP2Q08AD1 1489 aa8.39□□□□□ -1.07
C2CD3-207ENST00000442398 CCER2I3L3R5 266 aa8.38□□□□□ -1.07
C2CD3-207ENST00000442398 RPRD2Q5VT52 1461 aaKnown RBP8.38□□□□□ -1.07
C2CD3-207ENST00000442398 NBPF8Q3BBV2 869 aa8.38□□□□□ -1.07
C2CD3-207ENST00000442398 CHD1O14646 1710 aa8.38□□□□□ -1.07
C2CD3-207ENST00000442398 WASHC2AQ641Q2 1341 aa8.37□□□□□ -1.07
C2CD3-207ENST00000442398 GPATCH8Q9UKJ3 1502 aaKnown RBP8.37□□□□□ -1.07
C2CD3-207ENST00000442398 CDC42BPBQ9Y5S2 1711 aa8.37□□□□□ -1.07
C2CD3-207ENST00000442398 PZPP20742 1482 aa8.36□□□□□ -1.07
C2CD3-207ENST00000442398 UNC13BO14795 1591 aa8.36□□□□□ -1.07
C2CD3-207ENST00000442398 BCL11AQ9H165 835 aa8.36□□□□□ -1.07
C2CD3-207ENST00000442398 PLXNC1O60486 1568 aa8.35□□□□□ -1.07
C2CD3-207ENST00000442398 EFCAB2Q5VUJ9 269 aa8.35□□□□□ -1.07
C2CD3-207ENST00000442398 ANKRD50Q9ULJ7 1429 aa8.35□□□□□ -1.07
C2CD3-207ENST00000442398 LAMC1P11047 1609 aa8.34□□□□□ -1.07
C2CD3-207ENST00000442398 ST20-MTHFSA0A0A6YYL1 179 aa8.34□□□□□ -1.07
C2CD3-207ENST00000442398 ARHGEF12Q9NZN5 1544 aa8.34□□□□□ -1.07
C2CD3-207ENST00000442398 KIF15Q9NS87 1388 aa8.34□□□□□ -1.07
C2CD3-207ENST00000442398 E9PCH4 1651 aa8.34□□□□□ -1.08
C2CD3-207ENST00000442398 CC2D1BQ5T0F9 858 aaKnown RBP8.33□□□□□ -1.08
C2CD3-207ENST00000442398 C11orf95C9JLR9 678 aaPredicted RBP8.33□□□□□ -1.08
C2CD3-207ENST00000442398 ANKRD30BQ9BXX2 1392 aa8.32□□□□□ -1.08
C2CD3-207ENST00000442398 PRKRIP1Q9H875 184 aaPredicted RBP8.32□□□□□ -1.08
C2CD3-207ENST00000442398 SPATA31E1Q6ZUB1 1445 aa8.32□□□□□ -1.08
C2CD3-207ENST00000442398 SAMD9LQ8IVG5 1584 aa8.32□□□□□ -1.08
C2CD3-207ENST00000442398 ROCK2O75116 1388 aaKnown RBP8.32□□□□□ -1.08
C2CD3-207ENST00000442398 CCDC184Q52MB2 194 aa8.32□□□□□ -1.08
C2CD3-207ENST00000442398 KDM5CP41229 1560 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 NCOA1Q15788 1441 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
C2CD3-207ENST00000442398 AFAP1Q8N556 730 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms