RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
HMGB3P9-201ENST00000441799 NLRP6P59044 892 aa10.1□□□□□ -0.79
HMGB3P9-201ENST00000441799 MFRPQ9BY79 579 aa10.09□□□□□ -0.79
HMGB3P9-201ENST00000441799 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
HMGB3P9-201ENST00000441799 ZSWIM6Q9HCJ5 1215 aa10.08□□□□□ -0.8
HMGB3P9-201ENST00000441799 STK24Q9Y6E0 443 aa10.08□□□□□ -0.8
HMGB3P9-201ENST00000441799 VARS2Q5ST30 1063 aaKnown RBP10.07□□□□□ -0.8
HMGB3P9-201ENST00000441799 ECM2O94769 699 aaPredicted RBP10.05□□□□□ -0.8
HMGB3P9-201ENST00000441799 PKD2Q13563 968 aa10.05□□□□□ -0.8
HMGB3P9-201ENST00000441799 TAOK2Q9UL54 1235 aa10.04□□□□□ -0.8
HMGB3P9-201ENST00000441799 STK25O00506 426 aa10.03□□□□□ -0.8
HMGB3P9-201ENST00000441799 ARSIQ5FYB1 569 aa10.03□□□□□ -0.8
HMGB3P9-201ENST00000441799 RGL2O15211 777 aa10.02□□□□□ -0.81
HMGB3P9-201ENST00000441799 ZNF687Q8N1G0 1237 aa10.02□□□□□ -0.81
HMGB3P9-201ENST00000441799 KIF3CO14782 793 aa10.01□□□□□ -0.81
HMGB3P9-201ENST00000441799 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.81
HMGB3P9-201ENST00000441799 C2orf72A6NCS6 295 aa9.98□□□□□ -0.81
HMGB3P9-201ENST00000441799 ZNF316A6NFI3 1004 aaPredicted RBP9.94□□□□□ -0.82
HMGB3P9-201ENST00000441799 PPP1R37O75864 691 aa9.93□□□□□ -0.82
HMGB3P9-201ENST00000441799 RNF166Q96A37 237 aaPredicted RBP9.9□□□□□ -0.82
HMGB3P9-201ENST00000441799 MYT1LQ9UL68 1186 aa9.89□□□□□ -0.83
HMGB3P9-201ENST00000441799 SLC34A2O95436 690 aa9.88□□□□□ -0.83
HMGB3P9-201ENST00000441799 NUDT7P0C024 238 aa9.88□□□□□ -0.83
HMGB3P9-201ENST00000441799 PCDHGA4Q9Y5G9 962 aa9.87□□□□□ -0.83
HMGB3P9-201ENST00000441799 POTEEQ6S8J3 1075 aa9.86□□□□□ -0.83
HMGB3P9-201ENST00000441799 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
HMGB3P9-201ENST00000441799 TMC2Q8TDI7 906 aa9.85□□□□□ -0.83
HMGB3P9-201ENST00000441799 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
HMGB3P9-201ENST00000441799 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
HMGB3P9-201ENST00000441799 KDM4FA0A1W2PPD8 638 aa9.81□□□□□ -0.84
HMGB3P9-201ENST00000441799 PTGER2P43116 358 aa9.8□□□□□ -0.84
HMGB3P9-201ENST00000441799 AXIN2Q9Y2T1 843 aa9.8□□□□□ -0.84
HMGB3P9-201ENST00000441799 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
HMGB3P9-201ENST00000441799 PBX2P40425 430 aa9.77□□□□□ -0.85
HMGB3P9-201ENST00000441799 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
HMGB3P9-201ENST00000441799 FOXK1P85037 733 aa9.74□□□□□ -0.85
HMGB3P9-201ENST00000441799 GPHNQ9NQX3 736 aaPredicted RBP9.74□□□□□ -0.85
HMGB3P9-201ENST00000441799 PLPP6Q8IY26 295 aa9.73□□□□□ -0.85
HMGB3P9-201ENST00000441799 DSG2Q14126 1118 aa9.72□□□□□ -0.85
HMGB3P9-201ENST00000441799 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
HMGB3P9-201ENST00000441799 CHGAP10645 457 aaKnown RBP9.71□□□□□ -0.86
HMGB3P9-201ENST00000441799 ARHGAP33O14559 1287 aa9.7□□□□□ -0.86
HMGB3P9-201ENST00000441799 DNAJC5Q9H3Z4 198 aa9.68□□□□□ -0.86
HMGB3P9-201ENST00000441799 PSDA5PKW4 1024 aaPredicted RBP9.67□□□□□ -0.86
HMGB3P9-201ENST00000441799 ADGRD1Q6QNK2 874 aa9.67□□□□□ -0.86
HMGB3P9-201ENST00000441799 PSEN2P49810 448 aa9.66□□□□□ -0.86
HMGB3P9-201ENST00000441799 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
HMGB3P9-201ENST00000441799 HRO43593 1189 aa9.63□□□□□ -0.87
HMGB3P9-201ENST00000441799 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
HMGB3P9-201ENST00000441799 TK2O00142 265 aa9.62□□□□□ -0.87
HMGB3P9-201ENST00000441799 TBC1D12O60347 775 aa9.61□□□□□ -0.87
HMGB3P9-201ENST00000441799 CRISPLD2Q9H0B8 497 aa9.61□□□□□ -0.87
HMGB3P9-201ENST00000441799 PPP4R3BQ5MIZ7 849 aa9.59□□□□□ -0.87
HMGB3P9-201ENST00000441799 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
HMGB3P9-201ENST00000441799 NCKAP5LQ9HCH0 1330 aa9.57□□□□□ -0.88
HMGB3P9-201ENST00000441799 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
HMGB3P9-201ENST00000441799 PPP1R15BQ5SWA1 713 aa9.55□□□□□ -0.88
HMGB3P9-201ENST00000441799 KCNK17Q96T54 332 aa9.55□□□□□ -0.88
HMGB3P9-201ENST00000441799 PLA2G2EQ9NZK7 142 aa9.55□□□□□ -0.88
HMGB3P9-201ENST00000441799 GTPBP6O43824 516 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P9-201ENST00000441799 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
HMGB3P9-201ENST00000441799 VPS9D1Q9Y2B5 631 aa9.52□□□□□ -0.89
HMGB3P9-201ENST00000441799 PDE4AP27815 886 aa9.51□□□□□ -0.89
HMGB3P9-201ENST00000441799 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
HMGB3P9-201ENST00000441799 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
HMGB3P9-201ENST00000441799 FOSBP53539 338 aa9.5□□□□□ -0.89
HMGB3P9-201ENST00000441799 KCTD12Q96CX2 325 aaKnown RBP9.5□□□□□ -0.89
HMGB3P9-201ENST00000441799 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
HMGB3P9-201ENST00000441799 LARP6Q9BRS8 491 aaKnown RBP9.47□□□□□ -0.89
HMGB3P9-201ENST00000441799 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
HMGB3P9-201ENST00000441799 BHMG1C9JSJ3 638 aaPredicted RBP9.46□□□□□ -0.9
HMGB3P9-201ENST00000441799 EVI5O60447 810 aa9.46□□□□□ -0.9
HMGB3P9-201ENST00000441799 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
HMGB3P9-201ENST00000441799 MFSD10Q14728 455 aa9.44□□□□□ -0.9
HMGB3P9-201ENST00000441799 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
HMGB3P9-201ENST00000441799 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
HMGB3P9-201ENST00000441799 DDX27Q96GQ7 796 aaKnown RBP9.43□□□□□ -0.9
HMGB3P9-201ENST00000441799 JPH4Q96JJ6 628 aa9.43□□□□□ -0.9
HMGB3P9-201ENST00000441799 ZBED2Q9BTP6 218 aa9.43□□□□□ -0.9
HMGB3P9-201ENST00000441799 EMILIN3Q9NT22 766 aa9.43□□□□□ -0.9
HMGB3P9-201ENST00000441799 PTPREP23469 700 aa9.42□□□□□ -0.9
HMGB3P9-201ENST00000441799 CADPS2Q86UW7 1296 aa9.42□□□□□ -0.9
HMGB3P9-201ENST00000441799 ZDHHC16Q969W1 377 aa9.41□□□□□ -0.9
HMGB3P9-201ENST00000441799 PTPN5P54829 565 aa9.4□□□□□ -0.9
HMGB3P9-201ENST00000441799 MAP3K9P80192 1104 aa9.38□□□□□ -0.91
HMGB3P9-201ENST00000441799 THSD4Q6ZMP0 1018 aa9.37□□□□□ -0.91
HMGB3P9-201ENST00000441799 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
HMGB3P9-201ENST00000441799 MRPL50Q8N5N7 158 aaKnown RBP9.34□□□□□ -0.91
HMGB3P9-201ENST00000441799 COL9A1P20849 921 aa9.33□□□□□ -0.92
HMGB3P9-201ENST00000441799 WNT2BQ93097 391 aa9.33□□□□□ -0.92
HMGB3P9-201ENST00000441799 DCAF8L2P0C7V8 631 aa9.32□□□□□ -0.92
HMGB3P9-201ENST00000441799 PROX2Q3B8N5 592 aa9.31□□□□□ -0.92
HMGB3P9-201ENST00000441799 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
HMGB3P9-201ENST00000441799 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
HMGB3P9-201ENST00000441799 PPP1R3GB7ZBB8 358 aa9.3□□□□□ -0.92
HMGB3P9-201ENST00000441799 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
HMGB3P9-201ENST00000441799 NBPF3Q9H094 633 aa9.29□□□□□ -0.92
HMGB3P9-201ENST00000441799 PHF14O94880 888 aa9.28□□□□□ -0.92
HMGB3P9-201ENST00000441799 TYW1BQ6NUM6 668 aa9.28□□□□□ -0.92
HMGB3P9-201ENST00000441799 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms