RNA–Protein interactions for RNA: ENST00000441747.6

PCSK4-202, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-202ENST00000441747 CHD1O14646 1710 aa23.2■■□□□ 1.3
PCSK4-202ENST00000441747 BCL11AQ9H165 835 aa23.2■■□□□ 1.3
PCSK4-202ENST00000441747 DENND4BO75064 1496 aaPredicted RBP23.2■■□□□ 1.3
PCSK4-202ENST00000441747 GPATCH8Q9UKJ3 1502 aaKnown RBP23.18■■□□□ 1.3
PCSK4-202ENST00000441747 RRP7BPQ9NSQ0 103 aa23.18■■□□□ 1.3
PCSK4-202ENST00000441747 PPP1R15AO75807 674 aaPredicted RBP23.17■■□□□ 1.3
PCSK4-202ENST00000441747 SHROOM2Q13796 1616 aa23.16■■□□□ 1.3
PCSK4-202ENST00000441747 CHIC2Q9UKJ5 165 aa23.15■■□□□ 1.3
PCSK4-202ENST00000441747 ATP10BO94823 1461 aa23.15■■□□□ 1.3
PCSK4-202ENST00000441747 CAMSAP2Q08AD1 1489 aa23.15■■□□□ 1.3
PCSK4-202ENST00000441747 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
PCSK4-202ENST00000441747 ABCC10Q5T3U5 1492 aa23.12■■□□□ 1.29
PCSK4-202ENST00000441747 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
PCSK4-202ENST00000441747 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
PCSK4-202ENST00000441747 ADGBQ8N7X0 1667 aa23.09■■□□□ 1.29
PCSK4-202ENST00000441747 TONSLQ96HA7 1378 aa23.09■■□□□ 1.29
PCSK4-202ENST00000441747 CDC42BPAQ5VT25 1732 aa23.09■■□□□ 1.29
PCSK4-202ENST00000441747 ADGRL2O95490 1459 aa23.08■■□□□ 1.28
PCSK4-202ENST00000441747 PTPRGP23470 1445 aa23.06■■□□□ 1.28
PCSK4-202ENST00000441747 CFDP1Q9UEE9 299 aaPredicted RBP23.05■■□□□ 1.28
PCSK4-202ENST00000441747 PLEKHD1A6NEE1 506 aa23.03■■□□□ 1.28
PCSK4-202ENST00000441747 ANP32EQ9BTT0 268 aa23.03■■□□□ 1.28
PCSK4-202ENST00000441747 MPHOSPH9Q99550 1183 aa23.02■■□□□ 1.28
PCSK4-202ENST00000441747 NCOA1Q15788 1441 aa23.01■■□□□ 1.27
PCSK4-202ENST00000441747 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
PCSK4-202ENST00000441747 SHANK2Q9UPX8 1470 aa22.99■■□□□ 1.27
PCSK4-202ENST00000441747 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
PCSK4-202ENST00000441747 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
PCSK4-202ENST00000441747 PZPP20742 1482 aa22.93■■□□□ 1.26
PCSK4-202ENST00000441747 ARHGEF5Q12774 1597 aa22.93■■□□□ 1.26
PCSK4-202ENST00000441747 ERCC6L2Q5T890 1561 aa22.92■■□□□ 1.26
PCSK4-202ENST00000441747 PREX2Q70Z35 1606 aa22.92■■□□□ 1.26
PCSK4-202ENST00000441747 ABCC2Q92887 1545 aa22.91■■□□□ 1.26
PCSK4-202ENST00000441747 RPRD2Q5VT52 1461 aaKnown RBP22.9■■□□□ 1.26
PCSK4-202ENST00000441747 ANKRD30AQ9BXX3 1397 aa22.9■■□□□ 1.26
PCSK4-202ENST00000441747 CDC42BPBQ9Y5S2 1711 aa22.89■■□□□ 1.25
PCSK4-202ENST00000441747 SUPT16HQ9Y5B9 1047 aaKnown RBP22.89■■□□□ 1.25
PCSK4-202ENST00000441747 ZNF777Q9ULD5 760 aaPredicted RBP22.87■■□□□ 1.25
PCSK4-202ENST00000441747 MBD5Q9P267 1494 aa22.87■■□□□ 1.25
PCSK4-202ENST00000441747 TSHZ2Q9NRE2 1034 aa22.86■■□□□ 1.25
PCSK4-202ENST00000441747 C9orf84Q5VXU9 1444 aa22.86■■□□□ 1.25
PCSK4-202ENST00000441747 SAMD9LQ8IVG5 1584 aa22.86■■□□□ 1.25
PCSK4-202ENST00000441747 TEX14Q8IWB6 1497 aa22.85■■□□□ 1.25
PCSK4-202ENST00000441747 ANKRD50Q9ULJ7 1429 aa22.83■■□□□ 1.25
PCSK4-202ENST00000441747 KDM5DQ9BY66 1539 aa22.82■■□□□ 1.24
PCSK4-202ENST00000441747 FOXD1Q16676 465 aa22.82■■□□□ 1.24
PCSK4-202ENST00000441747 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
PCSK4-202ENST00000441747 SLC4A1APQ9BWU0 796 aaKnown RBP22.81■■□□□ 1.24
PCSK4-202ENST00000441747 TTC37Q6PGP7 1564 aa22.81■■□□□ 1.24
PCSK4-202ENST00000441747 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.81■■□□□ 1.24
PCSK4-202ENST00000441747 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
PCSK4-202ENST00000441747 KIAA1107Q9UPP5 1409 aa22.79■■□□□ 1.24
PCSK4-202ENST00000441747 L3MBTL2Q969R5 705 aa22.78■■□□□ 1.24
PCSK4-202ENST00000441747 CCDC141Q6ZP82 1450 aa22.78■■□□□ 1.24
PCSK4-202ENST00000441747 HIRIP3Q9BW71 556 aaPredicted RBP22.77■■□□□ 1.24
PCSK4-202ENST00000441747 MAST1Q9Y2H9 1570 aa22.77■■□□□ 1.24
PCSK4-202ENST00000441747 ZCCHC11Q5TAX3 1644 aaKnown RBP22.75■■□□□ 1.23
PCSK4-202ENST00000441747 MYO5CQ9NQX4 1742 aa22.74■■□□□ 1.23
PCSK4-202ENST00000441747 RSPH4AQ5TD94 716 aa22.74■■□□□ 1.23
PCSK4-202ENST00000441747 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
PCSK4-202ENST00000441747 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
PCSK4-202ENST00000441747 KIF15Q9NS87 1388 aa22.71■■□□□ 1.23
PCSK4-202ENST00000441747 HNRNPMP52272 730 aaKnown RBP eCLIP22.71■■□□□ 1.23
PCSK4-202ENST00000441747 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
PCSK4-202ENST00000441747 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
PCSK4-202ENST00000441747 PLEKHH2Q8IVE3 1493 aa22.68■■□□□ 1.22
PCSK4-202ENST00000441747 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
PCSK4-202ENST00000441747 PLXNC1O60486 1568 aa22.66■■□□□ 1.22
PCSK4-202ENST00000441747 NBPF8Q3BBV2 869 aa22.66■■□□□ 1.22
PCSK4-202ENST00000441747 PKD2Q13563 968 aa22.65■■□□□ 1.22
PCSK4-202ENST00000441747 EIF4G2P78344 907 aaKnown RBP eCLIP22.65■■□□□ 1.22
PCSK4-202ENST00000441747 NUP155O75694 1391 aa22.65■■□□□ 1.22
PCSK4-202ENST00000441747 CCER2I3L3R5 266 aa22.64■■□□□ 1.22
PCSK4-202ENST00000441747 PLCH2O75038 1416 aa22.63■■□□□ 1.21
PCSK4-202ENST00000441747 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
PCSK4-202ENST00000441747 SPATA31E1Q6ZUB1 1445 aa22.63■■□□□ 1.21
PCSK4-202ENST00000441747 UNC13BO14795 1591 aa22.62■■□□□ 1.21
PCSK4-202ENST00000441747 WASHC2AQ641Q2 1341 aa22.61■■□□□ 1.21
PCSK4-202ENST00000441747 ARHGEF12Q9NZN5 1544 aa22.6■■□□□ 1.21
PCSK4-202ENST00000441747 ARAP3Q8WWN8 1544 aa22.59■■□□□ 1.21
PCSK4-202ENST00000441747 ANP32CO43423 234 aa22.59■■□□□ 1.21
PCSK4-202ENST00000441747 POLR1AO95602 1720 aaPredicted RBP22.59■■□□□ 1.21
PCSK4-202ENST00000441747 FAM135AQ9P2D6 1515 aa22.59■■□□□ 1.21
PCSK4-202ENST00000441747 ABCC1P33527 1531 aa22.57■■□□□ 1.2
PCSK4-202ENST00000441747 UHRF1BP1Q6BDS2 1440 aa22.57■■□□□ 1.2
PCSK4-202ENST00000441747 DUOX2Q9NRD8 1548 aa22.53■■□□□ 1.2
PCSK4-202ENST00000441747 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
PCSK4-202ENST00000441747 MAGI2Q86UL8 1455 aa22.53■■□□□ 1.2
PCSK4-202ENST00000441747 CCDC7Q96M83 1385 aa22.52■■□□□ 1.19
PCSK4-202ENST00000441747 CNTLNQ9NXG0 1405 aa22.51■■□□□ 1.19
PCSK4-202ENST00000441747 ERBINQ96RT1 1412 aa22.5■■□□□ 1.19
PCSK4-202ENST00000441747 EFCAB2Q5VUJ9 269 aa22.49■■□□□ 1.19
PCSK4-202ENST00000441747 RALGAPBQ86X10 1494 aa22.49■■□□□ 1.19
PCSK4-202ENST00000441747 C11orf95C9JLR9 678 aaPredicted RBP22.48■■□□□ 1.19
PCSK4-202ENST00000441747 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
PCSK4-202ENST00000441747 KDM5CP41229 1560 aa22.47■■□□□ 1.19
PCSK4-202ENST00000441747 ABCA9Q8IUA7 1624 aa22.45■■□□□ 1.18
PCSK4-202ENST00000441747 TRAPPC8Q9Y2L5 1435 aa22.45■■□□□ 1.18
PCSK4-202ENST00000441747 BCANQ96GW7 911 aa22.44■■□□□ 1.18
PCSK4-202ENST00000441747 RTEL1-TNFRSF6BF6WH68 1400 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms