RNA–Protein interactions for RNA: ENST00000441738.1

TIMP1-203, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 5

Gene TIMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-203ENST00000441738 PLEKHD1A6NEE1 506 aa13.28□□□□□ -0.28
TIMP1-203ENST00000441738 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
TIMP1-203ENST00000441738 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
TIMP1-203ENST00000441738 ITSN2Q9NZM3 1697 aa13.28□□□□□ -0.28
TIMP1-203ENST00000441738 SIGLEC1Q9BZZ2 1709 aa13.27□□□□□ -0.28
TIMP1-203ENST00000441738 ATP1B4Q9UN42 357 aaPredicted RBP13.27□□□□□ -0.29
TIMP1-203ENST00000441738 FANCAO15360 1455 aa13.26□□□□□ -0.29
TIMP1-203ENST00000441738 PLCH2O75038 1416 aa13.26□□□□□ -0.29
TIMP1-203ENST00000441738 MAP3K1Q13233 1512 aa13.26□□□□□ -0.29
TIMP1-203ENST00000441738 SAMD9LQ8IVG5 1584 aa13.26□□□□□ -0.29
TIMP1-203ENST00000441738 SUPT6HQ7KZ85 1726 aaKnown RBP13.25□□□□□ -0.29
TIMP1-203ENST00000441738 PTPRMP28827 1452 aa13.25□□□□□ -0.29
TIMP1-203ENST00000441738 ABCC1P33527 1531 aa13.24□□□□□ -0.29
TIMP1-203ENST00000441738 SPATA31D1Q6ZQQ2 1576 aa13.23□□□□□ -0.29
TIMP1-203ENST00000441738 ZMYM4Q5VZL5 1548 aa13.23□□□□□ -0.29
TIMP1-203ENST00000441738 ARHGEF12Q9NZN5 1544 aa13.23□□□□□ -0.29
TIMP1-203ENST00000441738 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
TIMP1-203ENST00000441738 LRRC9Q6ZRR7 1453 aa13.23□□□□□ -0.29
TIMP1-203ENST00000441738 AKNAQ7Z591 1439 aa13.22□□□□□ -0.29
TIMP1-203ENST00000441738 KDM5CP41229 1560 aa13.21□□□□□ -0.29
TIMP1-203ENST00000441738 ARHGAP5Q13017 1502 aa13.21□□□□□ -0.29
TIMP1-203ENST00000441738 ARHGEF40Q8TER5 1519 aa13.2□□□□□ -0.3
TIMP1-203ENST00000441738 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
TIMP1-203ENST00000441738 CDK11AQ9UQ88 783 aaPredicted RBP13.18□□□□□ -0.3
TIMP1-203ENST00000441738 POGZQ7Z3K3 1410 aa13.18□□□□□ -0.3
TIMP1-203ENST00000441738 PHLDB1Q86UU1 1377 aa13.18□□□□□ -0.3
TIMP1-203ENST00000441738 HSPA2P54652 639 aa13.17□□□□□ -0.3
TIMP1-203ENST00000441738 KANK4Q5T7N3 995 aaPredicted RBP13.17□□□□□ -0.3
TIMP1-203ENST00000441738 SYCP2Q9BX26 1530 aa13.17□□□□□ -0.3
TIMP1-203ENST00000441738 MTUS2Q5JR59 1369 aa13.17□□□□□ -0.3
TIMP1-203ENST00000441738 KIDINS220Q9ULH0 1771 aa13.17□□□□□ -0.3
TIMP1-203ENST00000441738 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
TIMP1-203ENST00000441738 DENND4BO75064 1496 aaPredicted RBP13.16□□□□□ -0.3
TIMP1-203ENST00000441738 INO80Q9ULG1 1556 aaPredicted RBP13.15□□□□□ -0.3
TIMP1-203ENST00000441738 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
TIMP1-203ENST00000441738 SCAPERQ9BY12 1400 aa13.13□□□□□ -0.31
TIMP1-203ENST00000441738 TRAPPC8Q9Y2L5 1435 aa13.13□□□□□ -0.31
TIMP1-203ENST00000441738 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
TIMP1-203ENST00000441738 DIP2CQ9Y2E4 1556 aa13.13□□□□□ -0.31
TIMP1-203ENST00000441738 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
TIMP1-203ENST00000441738 ZFYVE16Q7Z3T8 1539 aa13.11□□□□□ -0.31
TIMP1-203ENST00000441738 ADGBQ8N7X0 1667 aa13.11□□□□□ -0.31
TIMP1-203ENST00000441738 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
TIMP1-203ENST00000441738 CAMSAP2Q08AD1 1489 aa13.1□□□□□ -0.31
TIMP1-203ENST00000441738 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
TIMP1-203ENST00000441738 MBD5Q9P267 1494 aa13.1□□□□□ -0.31
TIMP1-203ENST00000441738 CROCC2H7BZ55 1655 aa13.1□□□□□ -0.31
TIMP1-203ENST00000441738 CCNB3Q8WWL7 1395 aa13.09□□□□□ -0.31
TIMP1-203ENST00000441738 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.32
TIMP1-203ENST00000441738 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
TIMP1-203ENST00000441738 ARHGEF5Q12774 1597 aa13.07□□□□□ -0.32
TIMP1-203ENST00000441738 REREQ9P2R6 1566 aa13.07□□□□□ -0.32
TIMP1-203ENST00000441738 MAGI2Q86UL8 1455 aa13.07□□□□□ -0.32
TIMP1-203ENST00000441738 MLH3Q9UHC1 1453 aa13.07□□□□□ -0.32
TIMP1-203ENST00000441738 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
TIMP1-203ENST00000441738 PTPN23Q9H3S7 1636 aa13.06□□□□□ -0.32
TIMP1-203ENST00000441738 MYOM3Q5VTT5 1437 aa13.06□□□□□ -0.32
TIMP1-203ENST00000441738 KIAA1107Q9UPP5 1409 aa13.06□□□□□ -0.32
TIMP1-203ENST00000441738 PLXNC1O60486 1568 aa13.06□□□□□ -0.32
TIMP1-203ENST00000441738 ATP7AQ04656 1500 aa13.05□□□□□ -0.32
TIMP1-203ENST00000441738 MADDQ8WXG6 1647 aa13.04□□□□□ -0.32
TIMP1-203ENST00000441738 AFAP1Q8N556 730 aa13.04□□□□□ -0.32
TIMP1-203ENST00000441738 PLEKHH2Q8IVE3 1493 aa13.04□□□□□ -0.32
TIMP1-203ENST00000441738 PLPPR3Q6T4P5 718 aa13.03□□□□□ -0.32
TIMP1-203ENST00000441738 TCOF1Q13428 1488 aaKnown RBP13.03□□□□□ -0.32
TIMP1-203ENST00000441738 MAST1Q9Y2H9 1570 aa13.03□□□□□ -0.32
TIMP1-203ENST00000441738 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.32
TIMP1-203ENST00000441738 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.33
TIMP1-203ENST00000441738 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
TIMP1-203ENST00000441738 FGD6Q6ZV73 1430 aa13.01□□□□□ -0.33
TIMP1-203ENST00000441738 MIA2Q96PC5 1412 aa13.01□□□□□ -0.33
TIMP1-203ENST00000441738 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
TIMP1-203ENST00000441738 ATP10AO60312 1499 aa13□□□□□ -0.33
TIMP1-203ENST00000441738 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
TIMP1-203ENST00000441738 DMRT2Q9Y5R5 561 aa13□□□□□ -0.33
TIMP1-203ENST00000441738 C9orf84Q5VXU9 1444 aa12.99□□□□□ -0.33
TIMP1-203ENST00000441738 HNRNPMP52272 730 aaKnown RBP eCLIP12.99□□□□□ -0.33
TIMP1-203ENST00000441738 ZNF777Q9ULD5 760 aaPredicted RBP12.99□□□□□ -0.33
TIMP1-203ENST00000441738 AGLP35573 1532 aa12.98□□□□□ -0.33
TIMP1-203ENST00000441738 SHANK2Q9UPX8 1470 aa12.94□□□□□ -0.34
TIMP1-203ENST00000441738 MROH1Q8NDA8 1641 aa12.94□□□□□ -0.34
TIMP1-203ENST00000441738 RTEL1-TNFRSF6BF6WH68 1400 aa12.94□□□□□ -0.34
TIMP1-203ENST00000441738 ABCC5O15440 1437 aa12.94□□□□□ -0.34
TIMP1-203ENST00000441738 C3P01024 1663 aa12.93□□□□□ -0.34
TIMP1-203ENST00000441738 DAPK1P53355 1430 aa12.92□□□□□ -0.34
TIMP1-203ENST00000441738 RNF17Q9BXT8 1623 aaKnown RBP12.91□□□□□ -0.34
TIMP1-203ENST00000441738 A2MP01023 1474 aa12.91□□□□□ -0.34
TIMP1-203ENST00000441738 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
TIMP1-203ENST00000441738 EIF2AK4Q9P2K8 1649 aaKnown RBP12.91□□□□□ -0.34
TIMP1-203ENST00000441738 SPAG9O60271 1321 aaKnown RBP12.9□□□□□ -0.34
TIMP1-203ENST00000441738 CLTCQ00610 1675 aaKnown RBP12.9□□□□□ -0.34
TIMP1-203ENST00000441738 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
TIMP1-203ENST00000441738 PPARGC1BQ86YN6 1023 aaKnown RBP12.9□□□□□ -0.34
TIMP1-203ENST00000441738 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
TIMP1-203ENST00000441738 APLP2Q06481 763 aa12.89□□□□□ -0.35
TIMP1-203ENST00000441738 ADGRL2O95490 1459 aa12.88□□□□□ -0.35
TIMP1-203ENST00000441738 CEP152O94986 1710 aa12.87□□□□□ -0.35
TIMP1-203ENST00000441738 RRBP1Q9P2E9 1410 aaKnown RBP12.87□□□□□ -0.35
TIMP1-203ENST00000441738 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
TIMP1-203ENST00000441738 DUOX2Q9NRD8 1548 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms