RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 LRRIQ1Q96JM4 1722 aa13.34□□□□□ -0.27
LYSMD1-202ENST00000440902 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
LYSMD1-202ENST00000440902 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
LYSMD1-202ENST00000440902 KIF14Q15058 1648 aa13.34□□□□□ -0.27
LYSMD1-202ENST00000440902 ARHGAP35Q9NRY4 1499 aa13.34□□□□□ -0.27
LYSMD1-202ENST00000440902 LMTK3Q96Q04 1460 aa13.33□□□□□ -0.28
LYSMD1-202ENST00000440902 PLCH2O75038 1416 aa13.32□□□□□ -0.28
LYSMD1-202ENST00000440902 POGZQ7Z3K3 1410 aa13.32□□□□□ -0.28
LYSMD1-202ENST00000440902 SCAPERQ9BY12 1400 aa13.32□□□□□ -0.28
LYSMD1-202ENST00000440902 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
LYSMD1-202ENST00000440902 MLECQ14165 292 aa13.29□□□□□ -0.28
LYSMD1-202ENST00000440902 ARHGAP5Q13017 1502 aa13.28□□□□□ -0.28
LYSMD1-202ENST00000440902 CDK11AQ9UQ88 783 aaPredicted RBP13.27□□□□□ -0.29
LYSMD1-202ENST00000440902 ATP10AO60312 1499 aa13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 CLIP1P30622 1438 aa13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 HSPA2P54652 639 aa13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 TROQ12816 1431 aaPredicted RBP13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 C9orf84Q5VXU9 1444 aa13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 FBXO41Q8TF61 875 aa13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 CDC42BPBQ9Y5S2 1711 aa13.26□□□□□ -0.29
LYSMD1-202ENST00000440902 EFCAB2Q5VUJ9 269 aa13.25□□□□□ -0.29
LYSMD1-202ENST00000440902 ARHGEF12Q9NZN5 1544 aa13.24□□□□□ -0.29
LYSMD1-202ENST00000440902 ZNF518AQ6AHZ1 1483 aa13.24□□□□□ -0.29
LYSMD1-202ENST00000440902 PREX1Q8TCU6 1659 aa13.24□□□□□ -0.29
LYSMD1-202ENST00000440902 PREX2Q70Z35 1606 aa13.24□□□□□ -0.29
LYSMD1-202ENST00000440902 KDM5CP41229 1560 aa13.24□□□□□ -0.29
LYSMD1-202ENST00000440902 ABCA6Q8N139 1617 aa13.22□□□□□ -0.29
LYSMD1-202ENST00000440902 DIP2CQ9Y2E4 1556 aa13.22□□□□□ -0.29
LYSMD1-202ENST00000440902 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.29
LYSMD1-202ENST00000440902 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
LYSMD1-202ENST00000440902 CDC42BPAQ5VT25 1732 aa13.2□□□□□ -0.3
LYSMD1-202ENST00000440902 CCDC18Q5T9S5 1454 aa13.2□□□□□ -0.3
LYSMD1-202ENST00000440902 ABCC1P33527 1531 aa13.19□□□□□ -0.3
LYSMD1-202ENST00000440902 AFAP1Q8N556 730 aa13.19□□□□□ -0.3
LYSMD1-202ENST00000440902 CASKIN1Q8WXD9 1431 aa13.18□□□□□ -0.3
LYSMD1-202ENST00000440902 CEBPAP49715 358 aaPredicted RBP13.17□□□□□ -0.3
LYSMD1-202ENST00000440902 C3P01024 1663 aa13.17□□□□□ -0.3
LYSMD1-202ENST00000440902 REREQ9P2R6 1566 aa13.16□□□□□ -0.3
LYSMD1-202ENST00000440902 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
LYSMD1-202ENST00000440902 KIDINS220Q9ULH0 1771 aa13.15□□□□□ -0.3
LYSMD1-202ENST00000440902 FYCO1Q9BQS8 1478 aa13.15□□□□□ -0.3
LYSMD1-202ENST00000440902 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
LYSMD1-202ENST00000440902 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
LYSMD1-202ENST00000440902 SAMD9LQ8IVG5 1584 aa13.12□□□□□ -0.31
LYSMD1-202ENST00000440902 UHRF1BP1Q6BDS2 1440 aa13.12□□□□□ -0.31
LYSMD1-202ENST00000440902 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
LYSMD1-202ENST00000440902 AGLP35573 1532 aa13.11□□□□□ -0.31
LYSMD1-202ENST00000440902 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
LYSMD1-202ENST00000440902 SUPT6HQ7KZ85 1726 aaKnown RBP13.1□□□□□ -0.31
LYSMD1-202ENST00000440902 CERKQ8TCT0 537 aa13.1□□□□□ -0.31
LYSMD1-202ENST00000440902 ZNF777Q9ULD5 760 aaPredicted RBP13.1□□□□□ -0.31
LYSMD1-202ENST00000440902 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
LYSMD1-202ENST00000440902 GPATCH8Q9UKJ3 1502 aaKnown RBP13.07□□□□□ -0.32
LYSMD1-202ENST00000440902 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
LYSMD1-202ENST00000440902 ATP7AQ04656 1500 aa13.06□□□□□ -0.32
LYSMD1-202ENST00000440902 CLTCQ00610 1675 aaKnown RBP13.05□□□□□ -0.32
LYSMD1-202ENST00000440902 INO80Q9ULG1 1556 aaPredicted RBP13.05□□□□□ -0.32
LYSMD1-202ENST00000440902 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
LYSMD1-202ENST00000440902 HNRNPMP52272 730 aaKnown RBP eCLIP13.04□□□□□ -0.32
LYSMD1-202ENST00000440902 SPAG9O60271 1321 aaKnown RBP13.04□□□□□ -0.32
LYSMD1-202ENST00000440902 DMRT2Q9Y5R5 561 aa13.03□□□□□ -0.32
LYSMD1-202ENST00000440902 CCNB3Q8WWL7 1395 aa13.03□□□□□ -0.32
LYSMD1-202ENST00000440902 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
LYSMD1-202ENST00000440902 PLEKHH2Q8IVE3 1493 aa13.02□□□□□ -0.33
LYSMD1-202ENST00000440902 PLXNC1O60486 1568 aa13.02□□□□□ -0.33
LYSMD1-202ENST00000440902 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
LYSMD1-202ENST00000440902 ADGBQ8N7X0 1667 aa13.02□□□□□ -0.33
LYSMD1-202ENST00000440902 CFDP1Q9UEE9 299 aaPredicted RBP13.01□□□□□ -0.33
LYSMD1-202ENST00000440902 MYO3AQ8NEV4 1616 aa13□□□□□ -0.33
LYSMD1-202ENST00000440902 EHBP1L1Q8N3D4 1523 aa13□□□□□ -0.33
LYSMD1-202ENST00000440902 A2MP01023 1474 aa13□□□□□ -0.33
LYSMD1-202ENST00000440902 PTPRTO14522 1441 aa13□□□□□ -0.33
LYSMD1-202ENST00000440902 CAMSAP1Q5T5Y3 1602 aa12.99□□□□□ -0.33
LYSMD1-202ENST00000440902 KIAA1107Q9UPP5 1409 aa12.99□□□□□ -0.33
LYSMD1-202ENST00000440902 ZNF142P52746 1687 aaPredicted RBP12.99□□□□□ -0.33
LYSMD1-202ENST00000440902 NPATQ14207 1427 aa12.98□□□□□ -0.33
LYSMD1-202ENST00000440902 NCOA1Q15788 1441 aa12.98□□□□□ -0.33
LYSMD1-202ENST00000440902 ZMYM3Q14202 1370 aa12.97□□□□□ -0.33
LYSMD1-202ENST00000440902 LTBP4Q8N2S1 1624 aa12.96□□□□□ -0.33
LYSMD1-202ENST00000440902 CEP170BQ9Y4F5 1589 aaPredicted RBP12.95□□□□□ -0.34
LYSMD1-202ENST00000440902 ZNF644Q9H582 1327 aaPredicted RBP12.95□□□□□ -0.34
LYSMD1-202ENST00000440902 GGT6Q6P531 493 aa12.94□□□□□ -0.34
LYSMD1-202ENST00000440902 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
LYSMD1-202ENST00000440902 MBD5Q9P267 1494 aa12.92□□□□□ -0.34
LYSMD1-202ENST00000440902 PTPRKQ15262 1439 aa12.92□□□□□ -0.34
LYSMD1-202ENST00000440902 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
LYSMD1-202ENST00000440902 CAMSAP2Q08AD1 1489 aa12.91□□□□□ -0.34
LYSMD1-202ENST00000440902 DISP3Q9P2K9 1392 aa12.9□□□□□ -0.34
LYSMD1-202ENST00000440902 PLA2R1Q13018 1463 aa12.9□□□□□ -0.34
LYSMD1-202ENST00000440902 NCOA2Q15596 1464 aa12.9□□□□□ -0.34
LYSMD1-202ENST00000440902 IQSEC2Q5JU85 1478 aa12.9□□□□□ -0.34
LYSMD1-202ENST00000440902 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
LYSMD1-202ENST00000440902 CCDC141Q6ZP82 1450 aa12.89□□□□□ -0.35
LYSMD1-202ENST00000440902 SPATA31D1Q6ZQQ2 1576 aa12.89□□□□□ -0.35
LYSMD1-202ENST00000440902 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
LYSMD1-202ENST00000440902 POLR1AO95602 1720 aaPredicted RBP12.88□□□□□ -0.35
LYSMD1-202ENST00000440902 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
LYSMD1-202ENST00000440902 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
LYSMD1-202ENST00000440902 DHX29Q7Z478 1369 aaKnown RBP12.87□□□□□ -0.35
LYSMD1-202ENST00000440902 KDM5DQ9BY66 1539 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms