RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 DAPK1P53355 1430 aa19.51■□□□□ 0.71
ACTN4-204ENST00000440400 CAMSAP2Q08AD1 1489 aa19.5■□□□□ 0.71
ACTN4-204ENST00000440400 ACIN1Q9UKV3 1341 aaKnown RBP19.5■□□□□ 0.71
ACTN4-204ENST00000440400 ADGRL2O95490 1459 aa19.49■□□□□ 0.71
ACTN4-204ENST00000440400 GTF3C3Q9Y5Q9 886 aa19.49■□□□□ 0.71
ACTN4-204ENST00000440400 ZCCHC11Q5TAX3 1644 aaKnown RBP19.49■□□□□ 0.71
ACTN4-204ENST00000440400 KDM5BQ9UGL1 1544 aa19.48■□□□□ 0.71
ACTN4-204ENST00000440400 ARHGEF5Q12774 1597 aa19.48■□□□□ 0.71
ACTN4-204ENST00000440400 ABCC5O15440 1437 aa19.47■□□□□ 0.71
ACTN4-204ENST00000440400 CDC42BPBQ9Y5S2 1711 aa19.47■□□□□ 0.71
ACTN4-204ENST00000440400 SHANK2Q9UPX8 1470 aa19.47■□□□□ 0.71
ACTN4-204ENST00000440400 KDM6BO15054 1643 aa19.45■□□□□ 0.7
ACTN4-204ENST00000440400 TTC37Q6PGP7 1564 aa19.41■□□□□ 0.7
ACTN4-204ENST00000440400 ITGAEP38570 1179 aa19.4■□□□□ 0.7
ACTN4-204ENST00000440400 MYO5CQ9NQX4 1742 aa19.4■□□□□ 0.7
ACTN4-204ENST00000440400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.4■□□□□ 0.74e-6■□□□□ 9
ACTN4-204ENST00000440400 SAMD9LQ8IVG5 1584 aa19.39■□□□□ 0.7
ACTN4-204ENST00000440400 MAST1Q9Y2H9 1570 aa19.39■□□□□ 0.69
ACTN4-204ENST00000440400 DENND4BO75064 1496 aaPredicted RBP19.39■□□□□ 0.69
ACTN4-204ENST00000440400 ARAP3Q8WWN8 1544 aa19.37■□□□□ 0.69
ACTN4-204ENST00000440400 PLEKHD1A6NEE1 506 aa19.35■□□□□ 0.69
ACTN4-204ENST00000440400 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
ACTN4-204ENST00000440400 TIMELESSQ9UNS1 1208 aa19.33■□□□□ 0.69
ACTN4-204ENST00000440400 ARID3CA6NKF2 412 aa19.32■□□□□ 0.68
ACTN4-204ENST00000440400 NCOA1Q15788 1441 aa19.31■□□□□ 0.68
ACTN4-204ENST00000440400 KDM5DQ9BY66 1539 aa19.3■□□□□ 0.68
ACTN4-204ENST00000440400 ZNF644Q9H582 1327 aaPredicted RBP19.29■□□□□ 0.68
ACTN4-204ENST00000440400 PLXNC1O60486 1568 aa19.28■□□□□ 0.68
ACTN4-204ENST00000440400 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
ACTN4-204ENST00000440400 ABCA9Q8IUA7 1624 aa19.27■□□□□ 0.67
ACTN4-204ENST00000440400 KIAA1107Q9UPP5 1409 aa19.27■□□□□ 0.67
ACTN4-204ENST00000440400 PLEKHH2Q8IVE3 1493 aa19.26■□□□□ 0.67
ACTN4-204ENST00000440400 CCDC141Q6ZP82 1450 aa19.24■□□□□ 0.67
ACTN4-204ENST00000440400 ZNF316A6NFI3 1004 aaPredicted RBP19.24■□□□□ 0.67
ACTN4-204ENST00000440400 ABCC1P33527 1531 aa19.22■□□□□ 0.67
ACTN4-204ENST00000440400 PLCH2O75038 1416 aa19.22■□□□□ 0.67
ACTN4-204ENST00000440400 C9orf84Q5VXU9 1444 aa19.22■□□□□ 0.67
ACTN4-204ENST00000440400 PZPP20742 1482 aa19.21■□□□□ 0.67
ACTN4-204ENST00000440400 WDR7Q9Y4E6 1490 aa19.21■□□□□ 0.67
ACTN4-204ENST00000440400 SYCP2Q9BX26 1530 aa19.2■□□□□ 0.66
ACTN4-204ENST00000440400 ARHGAP5Q13017 1502 aa19.19■□□□□ 0.66
ACTN4-204ENST00000440400 UNC13BO14795 1591 aa19.19■□□□□ 0.66
ACTN4-204ENST00000440400 ANKRD30AQ9BXX3 1397 aa19.19■□□□□ 0.66
ACTN4-204ENST00000440400 RSPH4AQ5TD94 716 aa19.17■□□□□ 0.66
ACTN4-204ENST00000440400 RRP7BPQ9NSQ0 103 aa19.17■□□□□ 0.66
ACTN4-204ENST00000440400 ARHGEF12Q9NZN5 1544 aa19.15■□□□□ 0.66
ACTN4-204ENST00000440400 CENPBP07199 599 aaPredicted RBP19.15■□□□□ 0.66
ACTN4-204ENST00000440400 OSCARQ8IYS5 282 aa19.14■□□□□ 0.65
ACTN4-204ENST00000440400 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.65
ACTN4-204ENST00000440400 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
ACTN4-204ENST00000440400 ANKRD50Q9ULJ7 1429 aa19.11■□□□□ 0.65
ACTN4-204ENST00000440400 ANKRD30BQ9BXX2 1392 aa19.11■□□□□ 0.65
ACTN4-204ENST00000440400 RPRD2Q5VT52 1461 aaKnown RBP19.1■□□□□ 0.65
ACTN4-204ENST00000440400 INO80Q9ULG1 1556 aaPredicted RBP19.09■□□□□ 0.65
ACTN4-204ENST00000440400 SIN3AQ96ST3 1273 aa19.09■□□□□ 0.65
ACTN4-204ENST00000440400 MPHOSPH9Q99550 1183 aa19.09■□□□□ 0.65
ACTN4-204ENST00000440400 IQGAP3Q86VI3 1631 aa19.08■□□□□ 0.65
ACTN4-204ENST00000440400 CFAP74Q9C0B2 1584 aa19.08■□□□□ 0.64
ACTN4-204ENST00000440400 DUOX2Q9NRD8 1548 aa19.07■□□□□ 0.64
ACTN4-204ENST00000440400 TEX14Q8IWB6 1497 aa19.06■□□□□ 0.64
ACTN4-204ENST00000440400 RTEL1-TNFRSF6BF6WH68 1400 aa19.06■□□□□ 0.64
ACTN4-204ENST00000440400 PPP1R15AO75807 674 aaPredicted RBP19.06■□□□□ 0.64
ACTN4-204ENST00000440400 ASXL2Q76L83 1435 aa19.06■□□□□ 0.64
ACTN4-204ENST00000440400 ZFYVE16Q7Z3T8 1539 aa19.05■□□□□ 0.64
ACTN4-204ENST00000440400 DIEXFQ68CQ4 756 aaKnown RBP19.05■□□□□ 0.64
ACTN4-204ENST00000440400 DEPDC5O75140 1603 aa19.05■□□□□ 0.64
ACTN4-204ENST00000440400 ERBINQ96RT1 1412 aa19.04■□□□□ 0.64
ACTN4-204ENST00000440400 KIF15Q9NS87 1388 aa19.04■□□□□ 0.64
ACTN4-204ENST00000440400 BCL11AQ9H165 835 aa19.04■□□□□ 0.64
ACTN4-204ENST00000440400 ZNF777Q9ULD5 760 aaPredicted RBP19.02■□□□□ 0.64
ACTN4-204ENST00000440400 EIF2AK4Q9P2K8 1649 aaKnown RBP19.01■□□□□ 0.63
ACTN4-204ENST00000440400 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.63
ACTN4-204ENST00000440400 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
ACTN4-204ENST00000440400 TONSLQ96HA7 1378 aa18.99■□□□□ 0.63
ACTN4-204ENST00000440400 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
ACTN4-204ENST00000440400 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
ACTN4-204ENST00000440400 EFCAB2Q5VUJ9 269 aa18.97■□□□□ 0.63
ACTN4-204ENST00000440400 FANCAO15360 1455 aa18.97■□□□□ 0.63
ACTN4-204ENST00000440400 TRAPPC8Q9Y2L5 1435 aa18.97■□□□□ 0.63
ACTN4-204ENST00000440400 GLI2P10070 1586 aa18.97■□□□□ 0.63
ACTN4-204ENST00000440400 BCORL1Q5H9F3 1711 aa18.96■□□□□ 0.63
ACTN4-204ENST00000440400 RIMBP3CA6NJZ7 1639 aa18.96■□□□□ 0.63
ACTN4-204ENST00000440400 RIMBP3BA6NNM3 1639 aa18.96■□□□□ 0.63
ACTN4-204ENST00000440400 RIMBP3Q9UFD9 1639 aa18.96■□□□□ 0.63
ACTN4-204ENST00000440400 KDM5CP41229 1560 aa18.96■□□□□ 0.63
ACTN4-204ENST00000440400 MAP3K4Q9Y6R4 1608 aa18.96■□□□□ 0.62
ACTN4-204ENST00000440400 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
ACTN4-204ENST00000440400 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
ACTN4-204ENST00000440400 TRIM52Q96A61 297 aa18.94■□□□□ 0.62
ACTN4-204ENST00000440400 ATP7AQ04656 1500 aa18.94■□□□□ 0.62
ACTN4-204ENST00000440400 ATP10AO60312 1499 aa18.94■□□□□ 0.62
ACTN4-204ENST00000440400 PRKCSHP14314 528 aaPredicted RBP18.93■□□□□ 0.62
ACTN4-204ENST00000440400 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
ACTN4-204ENST00000440400 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
ACTN4-204ENST00000440400 SLC4A1APQ9BWU0 796 aaKnown RBP18.89■□□□□ 0.61
ACTN4-204ENST00000440400 MROH1Q8NDA8 1641 aa18.88■□□□□ 0.61
ACTN4-204ENST00000440400 KCNH8Q96L42 1107 aa18.88■□□□□ 0.61
ACTN4-204ENST00000440400 ADGRL1O94910 1474 aa18.88■□□□□ 0.61
ACTN4-204ENST00000440400 UHRF1BP1Q6BDS2 1440 aa18.88■□□□□ 0.61
ACTN4-204ENST00000440400 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms