RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
HMGB1P18-201ENST00000438801 FAM205CA6NFA0 338 aa9.19□□□□□ -0.94
HMGB1P18-201ENST00000438801 HOXB1P14653 301 aaPredicted RBP9.19□□□□□ -0.94
HMGB1P18-201ENST00000438801 PPP1R37O75864 691 aa9.18□□□□□ -0.94
HMGB1P18-201ENST00000438801 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
HMGB1P18-201ENST00000438801 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
HMGB1P18-201ENST00000438801 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
HMGB1P18-201ENST00000438801 KIF3CO14782 793 aa9.15□□□□□ -0.94
HMGB1P18-201ENST00000438801 ZSWIM6Q9HCJ5 1215 aa9.15□□□□□ -0.94
HMGB1P18-201ENST00000438801 C2orf72A6NCS6 295 aa9.14□□□□□ -0.95
HMGB1P18-201ENST00000438801 DNAJC5Q9H3Z4 198 aa9.13□□□□□ -0.95
HMGB1P18-201ENST00000438801 GPR153Q6NV75 609 aa9.12□□□□□ -0.95
HMGB1P18-201ENST00000438801 ERBB3P21860 1342 aa9.11□□□□□ -0.95
HMGB1P18-201ENST00000438801 TMC2Q8TDI7 906 aa9.11□□□□□ -0.95
HMGB1P18-201ENST00000438801 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
HMGB1P18-201ENST00000438801 ARSIQ5FYB1 569 aa9.09□□□□□ -0.95
HMGB1P18-201ENST00000438801 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
HMGB1P18-201ENST00000438801 KRTAP3-2Q9BYR7 98 aa9.08□□□□□ -0.96
HMGB1P18-201ENST00000438801 RYDENQ9NUL5 291 aaKnown RBP9.07□□□□□ -0.96
HMGB1P18-201ENST00000438801 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
HMGB1P18-201ENST00000438801 VARS2Q5ST30 1063 aaKnown RBP9.06□□□□□ -0.96
HMGB1P18-201ENST00000438801 SPNS2Q8IVW8 549 aa9.06□□□□□ -0.96
HMGB1P18-201ENST00000438801 KHSRPQ92945 711 aaKnown RBP eCLIP9.05□□□□□ -0.96
HMGB1P18-201ENST00000438801 SLC34A2O95436 690 aa9.04□□□□□ -0.96
HMGB1P18-201ENST00000438801 MMRN1Q13201 1228 aa9.01□□□□□ -0.97
HMGB1P18-201ENST00000438801 GPHNQ9NQX3 736 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P18-201ENST00000438801 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
HMGB1P18-201ENST00000438801 NUDT7P0C024 238 aa9□□□□□ -0.97
HMGB1P18-201ENST00000438801 FOXK1P85037 733 aa9□□□□□ -0.97
HMGB1P18-201ENST00000438801 ZNF687Q8N1G0 1237 aa9□□□□□ -0.97
HMGB1P18-201ENST00000438801 PCDHGA4Q9Y5G9 962 aa9□□□□□ -0.97
HMGB1P18-201ENST00000438801 PLPP6Q8IY26 295 aa8.99□□□□□ -0.97
HMGB1P18-201ENST00000438801 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P18-201ENST00000438801 DSG2Q14126 1118 aa8.97□□□□□ -0.97
HMGB1P18-201ENST00000438801 PTCD2Q8WV60 388 aaKnown RBP8.95□□□□□ -0.98
HMGB1P18-201ENST00000438801 LHX6Q9UPM6 363 aa8.94□□□□□ -0.98
HMGB1P18-201ENST00000438801 CRISPLD2Q9H0B8 497 aa8.93□□□□□ -0.98
HMGB1P18-201ENST00000438801 PDE4AP27815 886 aa8.9□□□□□ -0.98
HMGB1P18-201ENST00000438801 NCKAP5LQ9HCH0 1330 aa8.89□□□□□ -0.99
HMGB1P18-201ENST00000438801 KDM4FA0A1W2PPD8 638 aa8.89□□□□□ -0.99
HMGB1P18-201ENST00000438801 TBC1D12O60347 775 aa8.89□□□□□ -0.99
HMGB1P18-201ENST00000438801 AMER1Q5JTC6 1135 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P18-201ENST00000438801 PPP1R15BQ5SWA1 713 aa8.89□□□□□ -0.99
HMGB1P18-201ENST00000438801 PSDA5PKW4 1024 aaPredicted RBP8.87□□□□□ -0.99
HMGB1P18-201ENST00000438801 PBX2P40425 430 aa8.86□□□□□ -0.99
HMGB1P18-201ENST00000438801 ANKRD13DQ6ZTN6 518 aa8.86□□□□□ -0.99
HMGB1P18-201ENST00000438801 OXER1Q8TDS5 423 aa8.86□□□□□ -0.99
HMGB1P18-201ENST00000438801 UPF1Q92900 1129 aaKnown RBP eCLIP8.86□□□□□ -0.99
HMGB1P18-201ENST00000438801 LSM11P83369 360 aaKnown RBP eCLIP8.85□□□□□ -0.99
HMGB1P18-201ENST00000438801 POTEEQ6S8J3 1075 aa8.85□□□□□ -0.99
HMGB1P18-201ENST00000438801 LARP6Q9BRS8 491 aaKnown RBP8.85□□□□□ -0.99
HMGB1P18-201ENST00000438801 DDX27Q96GQ7 796 aaKnown RBP8.84□□□□□ -0.99
HMGB1P18-201ENST00000438801 RTN4Q9NQC3 1192 aaKnown RBP8.84□□□□□ -0.99
HMGB1P18-201ENST00000438801 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
HMGB1P18-201ENST00000438801 BBXQ8WY36 941 aaPredicted RBP8.83□□□□□ -1
HMGB1P18-201ENST00000438801 PTGER2P43116 358 aa8.82□□□□□ -1
HMGB1P18-201ENST00000438801 RNF166Q96A37 237 aaPredicted RBP8.82□□□□□ -1
HMGB1P18-201ENST00000438801 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
HMGB1P18-201ENST00000438801 MFSD10Q14728 455 aa8.81□□□□□ -1
HMGB1P18-201ENST00000438801 PPP4R3BQ5MIZ7 849 aa8.81□□□□□ -1
HMGB1P18-201ENST00000438801 ARHGAP33O14559 1287 aa8.8□□□□□ -1
HMGB1P18-201ENST00000438801 CADPS2Q86UW7 1296 aa8.8□□□□□ -1
HMGB1P18-201ENST00000438801 PSEN2P49810 448 aa8.75□□□□□ -1.01
HMGB1P18-201ENST00000438801 ZNF454Q8N9F8 522 aa8.75□□□□□ -1.01
HMGB1P18-201ENST00000438801 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P18-201ENST00000438801 EVI5O60447 810 aa8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 MAP3K9P80192 1104 aa8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 DMRTA1Q5VZB9 504 aa8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 ADGRD1Q6QNK2 874 aa8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 SPRYD3Q8NCJ5 442 aa8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
HMGB1P18-201ENST00000438801 FOSBP53539 338 aa8.72□□□□□ -1.01
HMGB1P18-201ENST00000438801 TK2O00142 265 aa8.71□□□□□ -1.02
HMGB1P18-201ENST00000438801 KCNH8Q96L42 1107 aa8.71□□□□□ -1.02
HMGB1P18-201ENST00000438801 KCNK17Q96T54 332 aa8.71□□□□□ -1.02
HMGB1P18-201ENST00000438801 JPH4Q96JJ6 628 aa8.7□□□□□ -1.02
HMGB1P18-201ENST00000438801 CAMK2BQ13554 666 aa8.69□□□□□ -1.02
HMGB1P18-201ENST00000438801 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
HMGB1P18-201ENST00000438801 HRO43593 1189 aa8.67□□□□□ -1.02
HMGB1P18-201ENST00000438801 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
HMGB1P18-201ENST00000438801 ZDHHC16Q969W1 377 aa8.67□□□□□ -1.02
HMGB1P18-201ENST00000438801 CFAP44Q96MT7 982 aa8.67□□□□□ -1.02
HMGB1P18-201ENST00000438801 PTPREP23469 700 aa8.66□□□□□ -1.02
HMGB1P18-201ENST00000438801 DPYSL4O14531 572 aa8.64□□□□□ -1.03
HMGB1P18-201ENST00000438801 STAC3Q96MF2 364 aa8.64□□□□□ -1.03
HMGB1P18-201ENST00000438801 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
HMGB1P18-201ENST00000438801 VPS9D1Q9Y2B5 631 aa8.64□□□□□ -1.03
HMGB1P18-201ENST00000438801 SLC4A5Q9BY07 1137 aa8.63□□□□□ -1.03
HMGB1P18-201ENST00000438801 PCDHGA10Q9Y5H3 936 aa8.63□□□□□ -1.03
HMGB1P18-201ENST00000438801 PHF14O94880 888 aa8.61□□□□□ -1.03
HMGB1P18-201ENST00000438801 ZBED2Q9BTP6 218 aa8.61□□□□□ -1.03
HMGB1P18-201ENST00000438801 HCSTQ9UBK5 93 aa8.6□□□□□ -1.03
HMGB1P18-201ENST00000438801 TYW1BQ6NUM6 668 aa8.59□□□□□ -1.03
HMGB1P18-201ENST00000438801 FBXW7Q969H0 707 aa8.59□□□□□ -1.03
HMGB1P18-201ENST00000438801 KCTD12Q96CX2 325 aaKnown RBP8.58□□□□□ -1.04
HMGB1P18-201ENST00000438801 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
HMGB1P18-201ENST00000438801 BHMG1C9JSJ3 638 aaPredicted RBP8.56□□□□□ -1.04
HMGB1P18-201ENST00000438801 E2F4Q16254 413 aa8.56□□□□□ -1.04
HMGB1P18-201ENST00000438801 EPAS1Q99814 870 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms