RNA–Protein interactions for RNA: ENST00000438180.1

GSE1-206, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 1 (best)

Gene GSE1, Length 1,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-206ENST00000438180 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
GSE1-206ENST00000438180 ACIN1Q9UKV3 1341 aaKnown RBP24.66■■□□□ 1.54
GSE1-206ENST00000438180 PREX2Q70Z35 1606 aa24.64■■□□□ 1.53
GSE1-206ENST00000438180 ABCC5O15440 1437 aa24.63■■□□□ 1.53
GSE1-206ENST00000438180 CROCC2H7BZ55 1655 aa24.61■■□□□ 1.53
GSE1-206ENST00000438180 ZNF644Q9H582 1327 aaPredicted RBP24.6■■□□□ 1.53
GSE1-206ENST00000438180 ADGBQ8N7X0 1667 aa24.6■■□□□ 1.53
GSE1-206ENST00000438180 MAPKBP1O60336 1514 aa24.59■■□□□ 1.53
GSE1-206ENST00000438180 CHIC2Q9UKJ5 165 aa24.58■■□□□ 1.52
GSE1-206ENST00000438180 MYO5CQ9NQX4 1742 aa24.57■■□□□ 1.52
GSE1-206ENST00000438180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.57■■□□□ 1.522e-6■□□□□ 8.9
GSE1-206ENST00000438180 ZNF777Q9ULD5 760 aaPredicted RBP24.57■■□□□ 1.52
GSE1-206ENST00000438180 CDC42BPBQ9Y5S2 1711 aa24.56■■□□□ 1.52
GSE1-206ENST00000438180 TTC37Q6PGP7 1564 aa24.56■■□□□ 1.52
GSE1-206ENST00000438180 SHANK2Q9UPX8 1470 aa24.55■■□□□ 1.52
GSE1-206ENST00000438180 RRP7BPQ9NSQ0 103 aa24.55■■□□□ 1.52
GSE1-206ENST00000438180 ARHGEF5Q12774 1597 aa24.54■■□□□ 1.52
GSE1-206ENST00000438180 ADGRL2O95490 1459 aa24.53■■□□□ 1.52
GSE1-206ENST00000438180 ARHGAP5Q13017 1502 aa24.5■■□□□ 1.51
GSE1-206ENST00000438180 PLEKHH2Q8IVE3 1493 aa24.5■■□□□ 1.51
GSE1-206ENST00000438180 RSPH4AQ5TD94 716 aa24.49■■□□□ 1.51
GSE1-206ENST00000438180 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
GSE1-206ENST00000438180 WDR7Q9Y4E6 1490 aa24.48■■□□□ 1.51
GSE1-206ENST00000438180 ANKRD30AQ9BXX3 1397 aa24.48■■□□□ 1.51
GSE1-206ENST00000438180 NCOA1Q15788 1441 aa24.46■■□□□ 1.51
GSE1-206ENST00000438180 CCDC141Q6ZP82 1450 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 KCNH8Q96L42 1107 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 ARAP3Q8WWN8 1544 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 PLCH2O75038 1416 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 TSPY4P0CV99 314 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 TSPY10P0CW01 314 aa24.44■■□□□ 1.5
GSE1-206ENST00000438180 KDM6BO15054 1643 aa24.43■■□□□ 1.5
GSE1-206ENST00000438180 MBD5Q9P267 1494 aa24.43■■□□□ 1.5
GSE1-206ENST00000438180 TIMELESSQ9UNS1 1208 aa24.42■■□□□ 1.5
GSE1-206ENST00000438180 KIAA1107Q9UPP5 1409 aa24.42■■□□□ 1.5
GSE1-206ENST00000438180 NPM1P06748 294 aaKnown RBP eCLIP24.41■■□□□ 1.5
GSE1-206ENST00000438180 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
GSE1-206ENST00000438180 SYCP2Q9BX26 1530 aa24.38■■□□□ 1.49
GSE1-206ENST00000438180 MAST1Q9Y2H9 1570 aa24.37■■□□□ 1.49
GSE1-206ENST00000438180 EFCAB2Q5VUJ9 269 aa24.37■■□□□ 1.49
GSE1-206ENST00000438180 ABCA9Q8IUA7 1624 aa24.37■■□□□ 1.49
GSE1-206ENST00000438180 ASXL2Q76L83 1435 aa24.36■■□□□ 1.49
GSE1-206ENST00000438180 HNRNPMP52272 730 aaKnown RBP eCLIP24.36■■□□□ 1.49
GSE1-206ENST00000438180 ANKRD50Q9ULJ7 1429 aa24.32■■□□□ 1.48
GSE1-206ENST00000438180 ABCC1P33527 1531 aa24.31■■□□□ 1.48
GSE1-206ENST00000438180 ZNF316A6NFI3 1004 aaPredicted RBP24.31■■□□□ 1.48
GSE1-206ENST00000438180 MPHOSPH9Q99550 1183 aa24.29■■□□□ 1.48
GSE1-206ENST00000438180 KIF15Q9NS87 1388 aa24.28■■□□□ 1.48
GSE1-206ENST00000438180 PLXNC1O60486 1568 aa24.27■■□□□ 1.48
GSE1-206ENST00000438180 NEUROD1Q13562 356 aa24.27■■□□□ 1.48
GSE1-206ENST00000438180 SIN3AQ96ST3 1273 aa24.27■■□□□ 1.48
GSE1-206ENST00000438180 DENND4BO75064 1496 aaPredicted RBP24.23■■□□□ 1.47
GSE1-206ENST00000438180 TONSLQ96HA7 1378 aa24.23■■□□□ 1.47
GSE1-206ENST00000438180 FANCAO15360 1455 aa24.23■■□□□ 1.47
GSE1-206ENST00000438180 ARHGEF12Q9NZN5 1544 aa24.22■■□□□ 1.47
GSE1-206ENST00000438180 RIMBP3CA6NJZ7 1639 aa24.21■■□□□ 1.47
GSE1-206ENST00000438180 RIMBP3BA6NNM3 1639 aa24.21■■□□□ 1.47
GSE1-206ENST00000438180 RIMBP3Q9UFD9 1639 aa24.21■■□□□ 1.47
GSE1-206ENST00000438180 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
GSE1-206ENST00000438180 KDM5DQ9BY66 1539 aa24.2■■□□□ 1.46
GSE1-206ENST00000438180 CFAP74Q9C0B2 1584 aa24.2■■□□□ 1.46
GSE1-206ENST00000438180 PZPP20742 1482 aa24.2■■□□□ 1.46
GSE1-206ENST00000438180 DUOX2Q9NRD8 1548 aa24.17■■□□□ 1.46
GSE1-206ENST00000438180 RTEL1-TNFRSF6BF6WH68 1400 aa24.16■■□□□ 1.46
GSE1-206ENST00000438180 TRAPPC8Q9Y2L5 1435 aa24.13■■□□□ 1.45
GSE1-206ENST00000438180 ADGRL1O94910 1474 aa24.13■■□□□ 1.45
GSE1-206ENST00000438180 ERBINQ96RT1 1412 aa24.13■■□□□ 1.45
GSE1-206ENST00000438180 ANKRD30BQ9BXX2 1392 aa24.13■■□□□ 1.45
GSE1-206ENST00000438180 NUP155O75694 1391 aa24.12■■□□□ 1.45
GSE1-206ENST00000438180 PPP1R15AO75807 674 aaPredicted RBP24.11■■□□□ 1.45
GSE1-206ENST00000438180 UNC13BO14795 1591 aa24.11■■□□□ 1.45
GSE1-206ENST00000438180 CD109Q6YHK3 1445 aa24.11■■□□□ 1.45
GSE1-206ENST00000438180 SPAG9O60271 1321 aaKnown RBP24.1■■□□□ 1.45
GSE1-206ENST00000438180 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
GSE1-206ENST00000438180 ZFYVE16Q7Z3T8 1539 aa24.09■■□□□ 1.45
GSE1-206ENST00000438180 CYB5RLQ6IPT4 315 aa24.08■■□□□ 1.45
GSE1-206ENST00000438180 RPRD2Q5VT52 1461 aaKnown RBP24.08■■□□□ 1.45
GSE1-206ENST00000438180 SCAPERQ9BY12 1400 aa24.07■■□□□ 1.44
GSE1-206ENST00000438180 INO80Q9ULG1 1556 aaPredicted RBP24.06■■□□□ 1.44
GSE1-206ENST00000438180 ATP7AQ04656 1500 aa24.04■■□□□ 1.44
GSE1-206ENST00000438180 PKD2Q13563 968 aa24.04■■□□□ 1.44
GSE1-206ENST00000438180 ZNF518AQ6AHZ1 1483 aa24.03■■□□□ 1.44
GSE1-206ENST00000438180 FOXD1Q16676 465 aa24.03■■□□□ 1.44
GSE1-206ENST00000438180 FAM135AQ9P2D6 1515 aa24.03■■□□□ 1.44
GSE1-206ENST00000438180 GLI2P10070 1586 aa24.01■■□□□ 1.43
GSE1-206ENST00000438180 NEO1Q92859 1461 aa24.01■■□□□ 1.43
GSE1-206ENST00000438180 IQGAP3Q86VI3 1631 aa24.01■■□□□ 1.43
GSE1-206ENST00000438180 AFAP1Q8N556 730 aa24.01■■□□□ 1.43
GSE1-206ENST00000438180 MAGI2Q86UL8 1455 aa24■■□□□ 1.43
GSE1-206ENST00000438180 MAP3K4Q9Y6R4 1608 aa23.98■■□□□ 1.43
GSE1-206ENST00000438180 POGZQ7Z3K3 1410 aa23.95■■□□□ 1.42
GSE1-206ENST00000438180 EIF2AK4Q9P2K8 1649 aaKnown RBP23.95■■□□□ 1.42
GSE1-206ENST00000438180 TEX14Q8IWB6 1497 aa23.94■■□□□ 1.42
GSE1-206ENST00000438180 KDM5CP41229 1560 aa23.94■■□□□ 1.42
GSE1-206ENST00000438180 MYT1LQ9UL68 1186 aa23.91■■□□□ 1.42
GSE1-206ENST00000438180 DEPDC5O75140 1603 aa23.91■■□□□ 1.42
GSE1-206ENST00000438180 KIDINS220Q9ULH0 1771 aa23.91■■□□□ 1.42
GSE1-206ENST00000438180 L3MBTL2Q969R5 705 aa23.9■■□□□ 1.42
GSE1-206ENST00000438180 DIP2BQ9P265 1576 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms