RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 SCAPERQ9BY12 1400 aa30.27■■■□□ 2.44
SMG1P3-201ENST00000435197 MYO5CQ9NQX4 1742 aa30.25■■■□□ 2.43
SMG1P3-201ENST00000435197 MLECQ14165 292 aa30.25■■■□□ 2.43
SMG1P3-201ENST00000435197 ARHGEF12Q9NZN5 1544 aa30.25■■■□□ 2.43
SMG1P3-201ENST00000435197 PREX1Q8TCU6 1659 aa30.23■■■□□ 2.43
SMG1P3-201ENST00000435197 ATP10AO60312 1499 aa30.21■■■□□ 2.43
SMG1P3-201ENST00000435197 CERKQ8TCT0 537 aa30.2■■■□□ 2.43
SMG1P3-201ENST00000435197 C9orf84Q5VXU9 1444 aa30.2■■■□□ 2.42
SMG1P3-201ENST00000435197 KIF14Q15058 1648 aa30.14■■■□□ 2.41
SMG1P3-201ENST00000435197 EFCAB2Q5VUJ9 269 aa30.11■■■□□ 2.41
SMG1P3-201ENST00000435197 FMN1Q68DA7 1419 aa30.1■■■□□ 2.41
SMG1P3-201ENST00000435197 KDM5CP41229 1560 aa30.1■■■□□ 2.41
SMG1P3-201ENST00000435197 ZNF518AQ6AHZ1 1483 aa30.09■■■□□ 2.41
SMG1P3-201ENST00000435197 STRCQ7RTU9 1775 aa30.08■■■□□ 2.41
SMG1P3-201ENST00000435197 CEBPAP49715 358 aaPredicted RBP30.05■■■□□ 2.4
SMG1P3-201ENST00000435197 ARHGAP5Q13017 1502 aa30.05■■■□□ 2.4
SMG1P3-201ENST00000435197 ATP1B4Q9UN42 357 aaPredicted RBP30.04■■■□□ 2.4
SMG1P3-201ENST00000435197 ARHGAP35Q9NRY4 1499 aa30.04■■■□□ 2.4
SMG1P3-201ENST00000435197 DIP2CQ9Y2E4 1556 aa30.03■■■□□ 2.4
SMG1P3-201ENST00000435197 LRRIQ1Q96JM4 1722 aa30.02■■■□□ 2.4
SMG1P3-201ENST00000435197 CDK11AQ9UQ88 783 aaPredicted RBP30.02■■■□□ 2.4
SMG1P3-201ENST00000435197 TROQ12816 1431 aaPredicted RBP30.02■■■□□ 2.4
SMG1P3-201ENST00000435197 REREQ9P2R6 1566 aa30.02■■■□□ 2.4
SMG1P3-201ENST00000435197 SETD1BQ9UPS6 1966 aaKnown RBP30.01■■■□□ 2.39
SMG1P3-201ENST00000435197 UHRF1BP1Q6BDS2 1440 aa29.99■■■□□ 2.39
SMG1P3-201ENST00000435197 ABCA6Q8N139 1617 aa29.99■■■□□ 2.39
SMG1P3-201ENST00000435197 CDC42BPBQ9Y5S2 1711 aa29.98■■■□□ 2.39
SMG1P3-201ENST00000435197 AFAP1Q8N556 730 aa29.97■■■□□ 2.39
SMG1P3-201ENST00000435197 C3P01024 1663 aa29.97■■■□□ 2.39
SMG1P3-201ENST00000435197 CLIP1P30622 1438 aa29.96■■■□□ 2.39
SMG1P3-201ENST00000435197 DMRT2Q9Y5R5 561 aa29.95■■■□□ 2.39
SMG1P3-201ENST00000435197 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
SMG1P3-201ENST00000435197 EHMT2Q96KQ7 1210 aa29.92■■■□□ 2.38
SMG1P3-201ENST00000435197 PREX2Q70Z35 1606 aa29.92■■■□□ 2.38
SMG1P3-201ENST00000435197 MLH3Q9UHC1 1453 aa29.92■■■□□ 2.38
SMG1P3-201ENST00000435197 MYT1LQ9UL68 1186 aa29.9■■■□□ 2.38
SMG1P3-201ENST00000435197 ITSN2Q9NZM3 1697 aa29.9■■■□□ 2.38
SMG1P3-201ENST00000435197 ABCC1P33527 1531 aa29.89■■■□□ 2.38
SMG1P3-201ENST00000435197 AGLP35573 1532 aa29.89■■■□□ 2.38
SMG1P3-201ENST00000435197 PTPRTO14522 1441 aa29.86■■■□□ 2.37
SMG1P3-201ENST00000435197 DISP3Q9P2K9 1392 aa29.84■■■□□ 2.37
SMG1P3-201ENST00000435197 TRAPPC8Q9Y2L5 1435 aa29.84■■■□□ 2.37
SMG1P3-201ENST00000435197 KIDINS220Q9ULH0 1771 aa29.83■■■□□ 2.37
SMG1P3-201ENST00000435197 CDC42BPAQ5VT25 1732 aa29.79■■■□□ 2.36
SMG1P3-201ENST00000435197 LTBP4Q8N2S1 1624 aa29.78■■■□□ 2.36
SMG1P3-201ENST00000435197 CCDC18Q5T9S5 1454 aa29.77■■■□□ 2.36
SMG1P3-201ENST00000435197 ILDR2Q71H61 639 aa29.77■■■□□ 2.36
SMG1P3-201ENST00000435197 ESF1Q9H501 851 aaKnown RBP29.77■■■□□ 2.36
SMG1P3-201ENST00000435197 SPATA31D1Q6ZQQ2 1576 aa29.75■■■□□ 2.35
SMG1P3-201ENST00000435197 CNTLNQ9NXG0 1405 aa29.75■■■□□ 2.35
SMG1P3-201ENST00000435197 MROH2AA6NES4 1674 aa29.74■■■□□ 2.35
SMG1P3-201ENST00000435197 NCOA1Q15788 1441 aa29.73■■■□□ 2.35
SMG1P3-201ENST00000435197 CASKIN1Q8WXD9 1431 aa29.72■■■□□ 2.35
SMG1P3-201ENST00000435197 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
SMG1P3-201ENST00000435197 IQSEC2Q5JU85 1478 aa29.71■■■□□ 2.35
SMG1P3-201ENST00000435197 SAMD9LQ8IVG5 1584 aa29.69■■■□□ 2.34
SMG1P3-201ENST00000435197 SOCS7O14512 581 aa29.68■■■□□ 2.34
SMG1P3-201ENST00000435197 CAMSAP1Q5T5Y3 1602 aa29.67■■■□□ 2.34
SMG1P3-201ENST00000435197 NPATQ14207 1427 aa29.66■■■□□ 2.34
SMG1P3-201ENST00000435197 SUPT6HQ7KZ85 1726 aaKnown RBP29.65■■■□□ 2.34
SMG1P3-201ENST00000435197 SYCP2Q9BX26 1530 aa29.64■■■□□ 2.34
SMG1P3-201ENST00000435197 FYCO1Q9BQS8 1478 aa29.6■■■□□ 2.33
SMG1P3-201ENST00000435197 ZNF142P52746 1687 aaPredicted RBP29.6■■■□□ 2.33
SMG1P3-201ENST00000435197 CLTCQ00610 1675 aaKnown RBP29.6■■■□□ 2.33
SMG1P3-201ENST00000435197 MYO3AQ8NEV4 1616 aa29.58■■■□□ 2.33
SMG1P3-201ENST00000435197 PLXNC1O60486 1568 aa29.57■■■□□ 2.32
SMG1P3-201ENST00000435197 ATP7AQ04656 1500 aa29.57■■■□□ 2.32
SMG1P3-201ENST00000435197 ZMYM3Q14202 1370 aa29.57■■■□□ 2.32
SMG1P3-201ENST00000435197 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
SMG1P3-201ENST00000435197 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
SMG1P3-201ENST00000435197 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
SMG1P3-201ENST00000435197 SPAG9O60271 1321 aaKnown RBP29.54■■■□□ 2.32
SMG1P3-201ENST00000435197 CEP170BQ9Y4F5 1589 aaPredicted RBP29.51■■■□□ 2.31
SMG1P3-201ENST00000435197 PLA2R1Q13018 1463 aa29.5■■■□□ 2.31
SMG1P3-201ENST00000435197 NCKAP5LQ9HCH0 1330 aa29.49■■■□□ 2.31
SMG1P3-201ENST00000435197 HNRNPMP52272 730 aaKnown RBP eCLIP29.49■■■□□ 2.312e-6■■□□□ 13.7
SMG1P3-201ENST00000435197 A2MP01023 1474 aa29.48■■■□□ 2.31
SMG1P3-201ENST00000435197 PLEKHH2Q8IVE3 1493 aa29.48■■■□□ 2.31
SMG1P3-201ENST00000435197 KIAA1107Q9UPP5 1409 aa29.48■■■□□ 2.31
SMG1P3-201ENST00000435197 ZNF335Q9H4Z2 1342 aaPredicted RBP29.47■■■□□ 2.31
SMG1P3-201ENST00000435197 PTPRKQ15262 1439 aa29.46■■■□□ 2.31
SMG1P3-201ENST00000435197 ADGBQ8N7X0 1667 aa29.45■■■□□ 2.31
SMG1P3-201ENST00000435197 TCOF1Q13428 1488 aaKnown RBP29.45■■■□□ 2.31
SMG1P3-201ENST00000435197 PKD2Q13563 968 aa29.42■■■□□ 2.3
SMG1P3-201ENST00000435197 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
SMG1P3-201ENST00000435197 UBAP1LF5GYI3 381 aa29.39■■■□□ 2.3
SMG1P3-201ENST00000435197 CCNB3Q8WWL7 1395 aa29.39■■■□□ 2.29
SMG1P3-201ENST00000435197 GGT6Q6P531 493 aa29.37■■■□□ 2.29
SMG1P3-201ENST00000435197 DNMT1P26358 1616 aaKnown RBP29.34■■■□□ 2.29
SMG1P3-201ENST00000435197 A2ML1A8K2U0 1454 aa29.33■■■□□ 2.29
SMG1P3-201ENST00000435197 POLR1AO95602 1720 aaPredicted RBP29.32■■■□□ 2.28
SMG1P3-201ENST00000435197 TIAM1Q13009 1591 aa29.32■■■□□ 2.28
SMG1P3-201ENST00000435197 PPP6R1Q9UPN7 881 aa29.32■■■□□ 2.28
SMG1P3-201ENST00000435197 MTUS2Q5JR59 1369 aa29.3■■■□□ 2.28
SMG1P3-201ENST00000435197 MBD5Q9P267 1494 aa29.27■■■□□ 2.28
SMG1P3-201ENST00000435197 NEURL4Q96JN8 1562 aa29.25■■■□□ 2.27
SMG1P3-201ENST00000435197 EHBP1L1Q8N3D4 1523 aa29.25■■■□□ 2.27
SMG1P3-201ENST00000435197 ZNF644Q9H582 1327 aaPredicted RBP29.24■■■□□ 2.27
SMG1P3-201ENST00000435197 RTEL1-TNFRSF6BF6WH68 1400 aa29.24■■■□□ 2.27
SMG1P3-201ENST00000435197 CPS1P31327 1500 aa29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms