RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 NUP160Q12769 1436 aa22.73■■□□□ 1.23
HLA-DQB2-231ENST00000435145 TRIM52Q96A61 297 aa22.72■■□□□ 1.23
HLA-DQB2-231ENST00000435145 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
HLA-DQB2-231ENST00000435145 ANP32CO43423 234 aa22.7■■□□□ 1.23
HLA-DQB2-231ENST00000435145 ANKRD30BQ9BXX2 1392 aa22.68■■□□□ 1.22
HLA-DQB2-231ENST00000435145 PRG4Q92954 1404 aaPredicted RBP22.68■■□□□ 1.22
HLA-DQB2-231ENST00000435145 ITSN2Q9NZM3 1697 aa22.67■■□□□ 1.22
HLA-DQB2-231ENST00000435145 PLB1Q6P1J6 1458 aa22.67■■□□□ 1.22
HLA-DQB2-231ENST00000435145 ZNF644Q9H582 1327 aaPredicted RBP22.67■■□□□ 1.22
HLA-DQB2-231ENST00000435145 CHMP7Q8WUX9 453 aaPredicted RBP22.66■■□□□ 1.22
HLA-DQB2-231ENST00000435145 RPRD2Q5VT52 1461 aaKnown RBP22.66■■□□□ 1.22
HLA-DQB2-231ENST00000435145 CAMSAP2Q08AD1 1489 aa22.65■■□□□ 1.22
HLA-DQB2-231ENST00000435145 GPATCH8Q9UKJ3 1502 aaKnown RBP22.65■■□□□ 1.22
HLA-DQB2-231ENST00000435145 CARMIL2Q6F5E8 1435 aa22.64■■□□□ 1.22
HLA-DQB2-231ENST00000435145 ADGRL2O95490 1459 aa22.62■■□□□ 1.21
HLA-DQB2-231ENST00000435145 TEX14Q8IWB6 1497 aa22.62■■□□□ 1.21
HLA-DQB2-231ENST00000435145 KIF14Q15058 1648 aa22.61■■□□□ 1.21
HLA-DQB2-231ENST00000435145 ADGBQ8N7X0 1667 aa22.61■■□□□ 1.21
HLA-DQB2-231ENST00000435145 HSPA5P11021 654 aaKnown RBP22.6■■□□□ 1.21
HLA-DQB2-231ENST00000435145 L3MBTL2Q969R5 705 aa22.6■■□□□ 1.21
HLA-DQB2-231ENST00000435145 ABCA8O94911 1581 aa22.6■■□□□ 1.21
HLA-DQB2-231ENST00000435145 NCOA1Q15788 1441 aa22.59■■□□□ 1.21
HLA-DQB2-231ENST00000435145 CROCC2H7BZ55 1655 aa22.59■■□□□ 1.21
HLA-DQB2-231ENST00000435145 JPH4Q96JJ6 628 aa22.58■■□□□ 1.21
HLA-DQB2-231ENST00000435145 PZPP20742 1482 aa22.58■■□□□ 1.2
HLA-DQB2-231ENST00000435145 WASHC2AQ641Q2 1341 aa22.57■■□□□ 1.2
HLA-DQB2-231ENST00000435145 CFDP1Q9UEE9 299 aaPredicted RBP22.57■■□□□ 1.2
HLA-DQB2-231ENST00000435145 EIF4G2P78344 907 aaKnown RBP eCLIP22.56■■□□□ 1.2
HLA-DQB2-231ENST00000435145 FOXD1Q16676 465 aa22.56■■□□□ 1.2
HLA-DQB2-231ENST00000435145 ABCC10Q5T3U5 1492 aa22.53■■□□□ 1.2
HLA-DQB2-231ENST00000435145 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
HLA-DQB2-231ENST00000435145 ATP10BO94823 1461 aa22.49■■□□□ 1.19
HLA-DQB2-231ENST00000435145 FBLN2P98095 1184 aa22.49■■□□□ 1.19
HLA-DQB2-231ENST00000435145 CNTLNQ9NXG0 1405 aa22.49■■□□□ 1.19
HLA-DQB2-231ENST00000435145 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
HLA-DQB2-231ENST00000435145 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
HLA-DQB2-231ENST00000435145 CDC42BPAQ5VT25 1732 aa22.48■■□□□ 1.19
HLA-DQB2-231ENST00000435145 NBPF8Q3BBV2 869 aa22.48■■□□□ 1.19
HLA-DQB2-231ENST00000435145 MBD5Q9P267 1494 aa22.47■■□□□ 1.19
HLA-DQB2-231ENST00000435145 ANKRD30AQ9BXX3 1397 aa22.47■■□□□ 1.19
HLA-DQB2-231ENST00000435145 KIAA1107Q9UPP5 1409 aa22.46■■□□□ 1.19
HLA-DQB2-231ENST00000435145 CCDC7Q96M83 1385 aa22.45■■□□□ 1.19
HLA-DQB2-231ENST00000435145 PLEKHD1A6NEE1 506 aa22.42■■□□□ 1.18
HLA-DQB2-231ENST00000435145 POLR1AO95602 1720 aaPredicted RBP22.42■■□□□ 1.18
HLA-DQB2-231ENST00000435145 ANKRD50Q9ULJ7 1429 aa22.41■■□□□ 1.18
HLA-DQB2-231ENST00000435145 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
HLA-DQB2-231ENST00000435145 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
HLA-DQB2-231ENST00000435145 KDM5DQ9BY66 1539 aa22.39■■□□□ 1.17
HLA-DQB2-231ENST00000435145 C9orf84Q5VXU9 1444 aa22.38■■□□□ 1.17
HLA-DQB2-231ENST00000435145 ARHGEF5Q12774 1597 aa22.38■■□□□ 1.17
HLA-DQB2-231ENST00000435145 FKBP8Q14318 412 aa22.37■■□□□ 1.17
HLA-DQB2-231ENST00000435145 PKD2Q13563 968 aa22.33■■□□□ 1.16
HLA-DQB2-231ENST00000435145 PTPRGP23470 1445 aa22.33■■□□□ 1.16
HLA-DQB2-231ENST00000435145 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
HLA-DQB2-231ENST00000435145 TSHZ2Q9NRE2 1034 aa22.31■■□□□ 1.16
HLA-DQB2-231ENST00000435145 PRKRIP1Q9H875 184 aaPredicted RBP22.31■■□□□ 1.16
HLA-DQB2-231ENST00000435145 UHRF1BP1Q6BDS2 1440 aa22.3■■□□□ 1.16
HLA-DQB2-231ENST00000435145 NEFLP07196 543 aa22.3■■□□□ 1.16
HLA-DQB2-231ENST00000435145 ARHGEF12Q9NZN5 1544 aa22.28■■□□□ 1.16
HLA-DQB2-231ENST00000435145 PREX2Q70Z35 1606 aa22.28■■□□□ 1.16
HLA-DQB2-231ENST00000435145 SHROOM2Q13796 1616 aa22.28■■□□□ 1.16
HLA-DQB2-231ENST00000435145 HNRNPUQ00839 825 aaKnown RBP eCLIP22.27■■□□□ 1.16
HLA-DQB2-231ENST00000435145 SAMD9LQ8IVG5 1584 aa22.26■■□□□ 1.15
HLA-DQB2-231ENST00000435145 NUP155O75694 1391 aa22.26■■□□□ 1.15
HLA-DQB2-231ENST00000435145 KIF15Q9NS87 1388 aa22.26■■□□□ 1.15
HLA-DQB2-231ENST00000435145 CDC42BPBQ9Y5S2 1711 aa22.25■■□□□ 1.15
HLA-DQB2-231ENST00000435145 KDM5CP41229 1560 aa22.25■■□□□ 1.15
HLA-DQB2-231ENST00000435145 TSPY4P0CV99 314 aa22.24■■□□□ 1.15
HLA-DQB2-231ENST00000435145 TSPY10P0CW01 314 aa22.24■■□□□ 1.15
HLA-DQB2-231ENST00000435145 BCANQ96GW7 911 aa22.24■■□□□ 1.15
HLA-DQB2-231ENST00000435145 CCDC141Q6ZP82 1450 aa22.24■■□□□ 1.15
HLA-DQB2-231ENST00000435145 CCDC184Q52MB2 194 aa22.24■■□□□ 1.15
HLA-DQB2-231ENST00000435145 RALGAPBQ86X10 1494 aa22.24■■□□□ 1.15
HLA-DQB2-231ENST00000435145 USP47Q96K76 1375 aa22.23■■□□□ 1.15
HLA-DQB2-231ENST00000435145 CHD1O14646 1710 aa22.23■■□□□ 1.15
HLA-DQB2-231ENST00000435145 BCORL1Q5H9F3 1711 aa22.22■■□□□ 1.15
HLA-DQB2-231ENST00000435145 ARID4BQ4LE39 1312 aaPredicted RBP22.21■■□□□ 1.15
HLA-DQB2-231ENST00000435145 HNRNPMP52272 730 aaKnown RBP eCLIP22.2■■□□□ 1.14
HLA-DQB2-231ENST00000435145 RSPH4AQ5TD94 716 aa22.19■■□□□ 1.14
HLA-DQB2-231ENST00000435145 MAST1Q9Y2H9 1570 aa22.19■■□□□ 1.14
HLA-DQB2-231ENST00000435145 DHX29Q7Z478 1369 aaKnown RBP22.19■■□□□ 1.14
HLA-DQB2-231ENST00000435145 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
HLA-DQB2-231ENST00000435145 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
HLA-DQB2-231ENST00000435145 MYT1Q01538 1121 aa22.14■■□□□ 1.14
HLA-DQB2-231ENST00000435145 MRS2Q9HD23 443 aa22.14■■□□□ 1.13
HLA-DQB2-231ENST00000435145 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.14■■□□□ 1.13
HLA-DQB2-231ENST00000435145 ABCC2Q92887 1545 aa22.14■■□□□ 1.13
HLA-DQB2-231ENST00000435145 UNC13BO14795 1591 aa22.13■■□□□ 1.13
HLA-DQB2-231ENST00000435145 SYCP2Q9BX26 1530 aa22.12■■□□□ 1.13
HLA-DQB2-231ENST00000435145 ZBED9Q6R2W3 1325 aa22.11■■□□□ 1.13
HLA-DQB2-231ENST00000435145 ROCK2O75116 1388 aaKnown RBP22.1■■□□□ 1.13
HLA-DQB2-231ENST00000435145 PLXNC1O60486 1568 aa22.1■■□□□ 1.13
HLA-DQB2-231ENST00000435145 ZNF326Q5BKZ1 582 aaKnown RBP22.09■■□□□ 1.13
HLA-DQB2-231ENST00000435145 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
HLA-DQB2-231ENST00000435145 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
HLA-DQB2-231ENST00000435145 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.12
HLA-DQB2-231ENST00000435145 MYO5CQ9NQX4 1742 aa22.06■■□□□ 1.12
HLA-DQB2-231ENST00000435145 ERICH6BQ5W0A0 696 aa22.06■■□□□ 1.12
HLA-DQB2-231ENST00000435145 FAM9BQ8IZU0 186 aa22.06■■□□□ 1.12
HLA-DQB2-231ENST00000435145 CARD11Q9BXL7 1154 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms