RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 MLECQ14165 292 aa36.94■■■■□ 3.5
PTPRA-207ENST00000431048 EFCAB2Q5VUJ9 269 aa36.92■■■■□ 3.5
PTPRA-207ENST00000431048 ATP10AO60312 1499 aa36.92■■■■□ 3.5
PTPRA-207ENST00000431048 CERKQ8TCT0 537 aa36.9■■■■□ 3.5
PTPRA-207ENST00000431048 ARHGEF12Q9NZN5 1544 aa36.87■■■■□ 3.49
PTPRA-207ENST00000431048 FER1L4A9Z1Z3 1794 aa36.86■■■■□ 3.49
PTPRA-207ENST00000431048 C9orf84Q5VXU9 1444 aa36.85■■■■□ 3.49
PTPRA-207ENST00000431048 CDK11AQ9UQ88 783 aaPredicted RBP36.85■■■■□ 3.49
PTPRA-207ENST00000431048 FMN1Q68DA7 1419 aa36.84■■■■□ 3.49
PTPRA-207ENST00000431048 ATP1B4Q9UN42 357 aaPredicted RBP36.77■■■■□ 3.48
PTPRA-207ENST00000431048 MYO5CQ9NQX4 1742 aa36.75■■■■□ 3.47
PTPRA-207ENST00000431048 ZNF518AQ6AHZ1 1483 aa36.74■■■■□ 3.47
PTPRA-207ENST00000431048 UBTFP17480 764 aaKnown RBP36.73■■■■□ 3.47
PTPRA-207ENST00000431048 CEBPAP49715 358 aaPredicted RBP36.71■■■■□ 3.47
PTPRA-207ENST00000431048 PREX1Q8TCU6 1659 aa36.7■■■■□ 3.47
PTPRA-207ENST00000431048 ARHGAP35Q9NRY4 1499 aa36.7■■■■□ 3.47
PTPRA-207ENST00000431048 TROQ12816 1431 aaPredicted RBP36.7■■■■□ 3.47
PTPRA-207ENST00000431048 DMRT2Q9Y5R5 561 aa36.7■■■■□ 3.47
PTPRA-207ENST00000431048 AFAP1Q8N556 730 aa36.69■■■■□ 3.46
PTPRA-207ENST00000431048 KDM5CP41229 1560 aa36.67■■■■□ 3.46
PTPRA-207ENST00000431048 KIF14Q15058 1648 aa36.66■■■■□ 3.46
PTPRA-207ENST00000431048 CLIP1P30622 1438 aa36.63■■■■□ 3.45
PTPRA-207ENST00000431048 ARHGAP5Q13017 1502 aa36.63■■■■□ 3.45
PTPRA-207ENST00000431048 SETD1BQ9UPS6 1966 aaKnown RBP36.62■■■■□ 3.45
PTPRA-207ENST00000431048 REREQ9P2R6 1566 aa36.6■■■■□ 3.45
PTPRA-207ENST00000431048 UHRF1BP1Q6BDS2 1440 aa36.59■■■■□ 3.45
PTPRA-207ENST00000431048 MLH3Q9UHC1 1453 aa36.58■■■■□ 3.45
PTPRA-207ENST00000431048 MYT1LQ9UL68 1186 aa36.56■■■■□ 3.44
PTPRA-207ENST00000431048 STRCQ7RTU9 1775 aa36.55■■■■□ 3.44
PTPRA-207ENST00000431048 EHMT2Q96KQ7 1210 aa36.55■■■■□ 3.44
PTPRA-207ENST00000431048 DIP2CQ9Y2E4 1556 aa36.55■■■■□ 3.44
PTPRA-207ENST00000431048 AGLP35573 1532 aa36.5■■■■□ 3.43
PTPRA-207ENST00000431048 PTPRTO14522 1441 aa36.48■■■■□ 3.43
PTPRA-207ENST00000431048 CDC42BPBQ9Y5S2 1711 aa36.47■■■■□ 3.43
PTPRA-207ENST00000431048 TRAPPC8Q9Y2L5 1435 aa36.45■■■■□ 3.43
PTPRA-207ENST00000431048 ABCA6Q8N139 1617 aa36.45■■■■□ 3.42
PTPRA-207ENST00000431048 ESF1Q9H501 851 aaKnown RBP36.44■■■■□ 3.42
PTPRA-207ENST00000431048 LRRIQ1Q96JM4 1722 aa36.43■■■■□ 3.42
PTPRA-207ENST00000431048 ABCC1P33527 1531 aa36.41■■■■□ 3.42
PTPRA-207ENST00000431048 C3P01024 1663 aa36.41■■■■□ 3.42
PTPRA-207ENST00000431048 PREX2Q70Z35 1606 aa36.39■■■■□ 3.42
PTPRA-207ENST00000431048 CASKIN1Q8WXD9 1431 aa36.38■■■■□ 3.41
PTPRA-207ENST00000431048 CCDC18Q5T9S5 1454 aa36.37■■■■□ 3.41
PTPRA-207ENST00000431048 CNTLNQ9NXG0 1405 aa36.37■■■■□ 3.41
PTPRA-207ENST00000431048 DISP3Q9P2K9 1392 aa36.33■■■■□ 3.41
PTPRA-207ENST00000431048 ITSN2Q9NZM3 1697 aa36.32■■■■□ 3.41
PTPRA-207ENST00000431048 KIDINS220Q9ULH0 1771 aa36.31■■■■□ 3.4
PTPRA-207ENST00000431048 CHIC1Q5VXU3 224 aa36.3■■■■□ 3.4
PTPRA-207ENST00000431048 NCOA1Q15788 1441 aa36.27■■■■□ 3.4
PTPRA-207ENST00000431048 ILDR2Q71H61 639 aa36.27■■■■□ 3.4
PTPRA-207ENST00000431048 LTBP4Q8N2S1 1624 aa36.26■■■■□ 3.39
PTPRA-207ENST00000431048 NPATQ14207 1427 aa36.25■■■■□ 3.39
PTPRA-207ENST00000431048 IQSEC2Q5JU85 1478 aa36.24■■■■□ 3.39
PTPRA-207ENST00000431048 CDC42BPAQ5VT25 1732 aa36.22■■■■□ 3.39
PTPRA-207ENST00000431048 SOCS7O14512 581 aa36.21■■■■□ 3.39
PTPRA-207ENST00000431048 SAMD9LQ8IVG5 1584 aa36.21■■■■□ 3.39
PTPRA-207ENST00000431048 ZMYM3Q14202 1370 aa36.19■■■■□ 3.38
PTPRA-207ENST00000431048 SPAG9O60271 1321 aaKnown RBP36.17■■■■□ 3.38
PTPRA-207ENST00000431048 MROH2AA6NES4 1674 aa36.16■■■■□ 3.38
PTPRA-207ENST00000431048 ZNF777Q9ULD5 760 aaPredicted RBP36.16■■■■□ 3.38
PTPRA-207ENST00000431048 FYCO1Q9BQS8 1478 aa36.16■■■■□ 3.38
PTPRA-207ENST00000431048 GPATCH8Q9UKJ3 1502 aaKnown RBP36.15■■■■□ 3.38
PTPRA-207ENST00000431048 KIAA1107Q9UPP5 1409 aa36.12■■■■□ 3.37
PTPRA-207ENST00000431048 HNRNPMP52272 730 aaKnown RBP eCLIP36.12■■■■□ 3.374e-7■■■■■ 28.7
PTPRA-207ENST00000431048 CAMSAP1Q5T5Y3 1602 aa36.12■■■■□ 3.37
PTPRA-207ENST00000431048 SYCP2Q9BX26 1530 aa36.09■■■■□ 3.37
PTPRA-207ENST00000431048 PLEKHH2Q8IVE3 1493 aa36.06■■■■□ 3.36
PTPRA-207ENST00000431048 NCKAP5LQ9HCH0 1330 aa36.05■■■■□ 3.36
PTPRA-207ENST00000431048 PKD2Q13563 968 aa36.04■■■■□ 3.36
PTPRA-207ENST00000431048 CFDP1Q9UEE9 299 aaPredicted RBP36.04■■■■□ 3.36
PTPRA-207ENST00000431048 ATP7AQ04656 1500 aa36.03■■■■□ 3.36
PTPRA-207ENST00000431048 SPATA31D1Q6ZQQ2 1576 aa36.03■■■■□ 3.36
PTPRA-207ENST00000431048 PPP6R1Q9UPN7 881 aa36.03■■■■□ 3.36
PTPRA-207ENST00000431048 A2MP01023 1474 aa36.02■■■■□ 3.36
PTPRA-207ENST00000431048 PLXNC1O60486 1568 aa36.02■■■■□ 3.36
PTPRA-207ENST00000431048 SUPT6HQ7KZ85 1726 aaKnown RBP36.01■■■■□ 3.36
PTPRA-207ENST00000431048 PLA2R1Q13018 1463 aa36■■■■□ 3.35
PTPRA-207ENST00000431048 PTPRKQ15262 1439 aa36■■■■□ 3.35
PTPRA-207ENST00000431048 INO80Q9ULG1 1556 aaPredicted RBP35.98■■■■□ 3.35
PTPRA-207ENST00000431048 CCNB3Q8WWL7 1395 aa35.97■■■■□ 3.35
PTPRA-207ENST00000431048 ZNF335Q9H4Z2 1342 aaPredicted RBP35.96■■■■□ 3.35
PTPRA-207ENST00000431048 CLTCQ00610 1675 aaKnown RBP35.95■■■■□ 3.35
PTPRA-207ENST00000431048 GGT6Q6P531 493 aa35.95■■■■□ 3.35
PTPRA-207ENST00000431048 TCOF1Q13428 1488 aaKnown RBP35.94■■■■□ 3.34
PTPRA-207ENST00000431048 ZNF142P52746 1687 aaPredicted RBP35.94■■■■□ 3.34
PTPRA-207ENST00000431048 MYO3AQ8NEV4 1616 aa35.9■■■■□ 3.34
PTPRA-207ENST00000431048 CEP170BQ9Y4F5 1589 aaPredicted RBP35.89■■■■□ 3.34
PTPRA-207ENST00000431048 UBAP1LF5GYI3 381 aa35.89■■■■□ 3.34
PTPRA-207ENST00000431048 MTUS2Q5JR59 1369 aa35.86■■■■□ 3.33
PTPRA-207ENST00000431048 ADGBQ8N7X0 1667 aa35.82■■■■□ 3.33
PTPRA-207ENST00000431048 RTEL1-TNFRSF6BF6WH68 1400 aa35.82■■■■□ 3.32
PTPRA-207ENST00000431048 MBD5Q9P267 1494 aa35.81■■■■□ 3.32
PTPRA-207ENST00000431048 ZNF644Q9H582 1327 aaPredicted RBP35.8■■■■□ 3.32
PTPRA-207ENST00000431048 A2ML1A8K2U0 1454 aa35.8■■■■□ 3.32
PTPRA-207ENST00000431048 DHX29Q7Z478 1369 aaKnown RBP35.77■■■■□ 3.32
PTPRA-207ENST00000431048 DNMT1P26358 1616 aaKnown RBP35.72■■■■□ 3.31
PTPRA-207ENST00000431048 TIAM1Q13009 1591 aa35.72■■■■□ 3.31
PTPRA-207ENST00000431048 CEP162Q5TB80 1403 aa35.68■■■■□ 3.3
PTPRA-207ENST00000431048 EHBP1L1Q8N3D4 1523 aa35.67■■■■□ 3.3
PTPRA-207ENST00000431048 TNRQ92752 1358 aa35.66■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms