RNA–Protein interactions for RNA: ENST00000428823.6

PCBP4-203, Transcript of poly(rC) binding protein 4, humanhuman

TSL 5 BASIC

Gene PCBP4, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-203ENST00000428823 SIN3AQ96ST3 1273 aa25.35■■□□□ 1.65
PCBP4-203ENST00000428823 RRP7BPQ9NSQ0 103 aa25.35■■□□□ 1.65
PCBP4-203ENST00000428823 CHIC2Q9UKJ5 165 aa25.35■■□□□ 1.65
PCBP4-203ENST00000428823 CROCC2H7BZ55 1655 aa25.35■■□□□ 1.65
PCBP4-203ENST00000428823 ADGBQ8N7X0 1667 aa25.35■■□□□ 1.65
PCBP4-203ENST00000428823 CFDP1Q9UEE9 299 aaPredicted RBP25.33■■□□□ 1.65
PCBP4-203ENST00000428823 KDM6BO15054 1643 aa25.33■■□□□ 1.65
PCBP4-203ENST00000428823 ZNF644Q9H582 1327 aaPredicted RBP25.3■■□□□ 1.64
PCBP4-203ENST00000428823 NEUROD1Q13562 356 aa25.29■■□□□ 1.64
PCBP4-203ENST00000428823 ABCC2Q92887 1545 aa25.27■■□□□ 1.64
PCBP4-203ENST00000428823 ADGRL2O95490 1459 aa25.27■■□□□ 1.64
PCBP4-203ENST00000428823 ERCC6L2Q5T890 1561 aa25.26■■□□□ 1.63
PCBP4-203ENST00000428823 DENND4BO75064 1496 aaPredicted RBP25.24■■□□□ 1.63
PCBP4-203ENST00000428823 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
PCBP4-203ENST00000428823 SHANK2Q9UPX8 1470 aa25.21■■□□□ 1.63
PCBP4-203ENST00000428823 PREX2Q70Z35 1606 aa25.21■■□□□ 1.63
PCBP4-203ENST00000428823 TONSLQ96HA7 1378 aa25.21■■□□□ 1.63
PCBP4-203ENST00000428823 NCOA1Q15788 1441 aa25.2■■□□□ 1.63
PCBP4-203ENST00000428823 ARHGEF5Q12774 1597 aa25.18■■□□□ 1.62
PCBP4-203ENST00000428823 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
PCBP4-203ENST00000428823 TRIM52Q96A61 297 aa25.17■■□□□ 1.62
PCBP4-203ENST00000428823 UHRF1BP1LA0JNW5 1464 aa25.16■■□□□ 1.62
PCBP4-203ENST00000428823 MPHOSPH9Q99550 1183 aa25.15■■□□□ 1.62
PCBP4-203ENST00000428823 ZNF777Q9ULD5 760 aaPredicted RBP25.14■■□□□ 1.62
PCBP4-203ENST00000428823 ANKRD30AQ9BXX3 1397 aa25.14■■□□□ 1.61
PCBP4-203ENST00000428823 MIER1Q8N108 512 aa25.12■■□□□ 1.61
PCBP4-203ENST00000428823 KDM5BQ9UGL1 1544 aa25.1■■□□□ 1.61
PCBP4-203ENST00000428823 SAMD9LQ8IVG5 1584 aa25.09■■□□□ 1.61
PCBP4-203ENST00000428823 ZCCHC11Q5TAX3 1644 aaKnown RBP25.09■■□□□ 1.61
PCBP4-203ENST00000428823 MYO5CQ9NQX4 1742 aa25.09■■□□□ 1.61
PCBP4-203ENST00000428823 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.08■■□□□ 1.61
PCBP4-203ENST00000428823 C9orf84Q5VXU9 1444 aa25.08■■□□□ 1.61
PCBP4-203ENST00000428823 TTC37Q6PGP7 1564 aa25.08■■□□□ 1.6
PCBP4-203ENST00000428823 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
PCBP4-203ENST00000428823 RSPH4AQ5TD94 716 aa25.04■■□□□ 1.6
PCBP4-203ENST00000428823 PZPP20742 1482 aa25.04■■□□□ 1.6
PCBP4-203ENST00000428823 ANKRD30BQ9BXX2 1392 aa25.03■■□□□ 1.6
PCBP4-203ENST00000428823 ANKRD50Q9ULJ7 1429 aa25.03■■□□□ 1.6
PCBP4-203ENST00000428823 CCDC141Q6ZP82 1450 aa25.03■■□□□ 1.6
PCBP4-203ENST00000428823 CENPBP07199 599 aaPredicted RBP25.01■■□□□ 1.59
PCBP4-203ENST00000428823 TSPY4P0CV99 314 aa25■■□□□ 1.59
PCBP4-203ENST00000428823 TSPY10P0CW01 314 aa25■■□□□ 1.59
PCBP4-203ENST00000428823 RPRD2Q5VT52 1461 aaKnown RBP25■■□□□ 1.59
PCBP4-203ENST00000428823 MAST1Q9Y2H9 1570 aa24.99■■□□□ 1.59
PCBP4-203ENST00000428823 PLEKHH2Q8IVE3 1493 aa24.99■■□□□ 1.59
PCBP4-203ENST00000428823 ARHGAP5Q13017 1502 aa24.99■■□□□ 1.59
PCBP4-203ENST00000428823 SLC4A1APQ9BWU0 796 aaKnown RBP24.98■■□□□ 1.59
PCBP4-203ENST00000428823 KDM5DQ9BY66 1539 aa24.97■■□□□ 1.59
PCBP4-203ENST00000428823 KIAA1107Q9UPP5 1409 aa24.95■■□□□ 1.59
PCBP4-203ENST00000428823 SYCP2Q9BX26 1530 aa24.94■■□□□ 1.58
PCBP4-203ENST00000428823 HNRNPMP52272 730 aaKnown RBP eCLIP24.93■■□□□ 1.58
PCBP4-203ENST00000428823 KIF15Q9NS87 1388 aa24.92■■□□□ 1.58
PCBP4-203ENST00000428823 PLCH2O75038 1416 aa24.91■■□□□ 1.58
PCBP4-203ENST00000428823 FOXD1Q16676 465 aa24.9■■□□□ 1.58
PCBP4-203ENST00000428823 ARAP3Q8WWN8 1544 aa24.89■■□□□ 1.58
PCBP4-203ENST00000428823 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.58
PCBP4-203ENST00000428823 PLXNC1O60486 1568 aa24.89■■□□□ 1.58
PCBP4-203ENST00000428823 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
PCBP4-203ENST00000428823 KCNH8Q96L42 1107 aa24.82■■□□□ 1.56
PCBP4-203ENST00000428823 ABCC1P33527 1531 aa24.82■■□□□ 1.56
PCBP4-203ENST00000428823 NUP155O75694 1391 aa24.82■■□□□ 1.56
PCBP4-203ENST00000428823 WDR7Q9Y4E6 1490 aa24.81■■□□□ 1.56
PCBP4-203ENST00000428823 UNC13BO14795 1591 aa24.81■■□□□ 1.56
PCBP4-203ENST00000428823 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
PCBP4-203ENST00000428823 PKD2Q13563 968 aa24.79■■□□□ 1.56
PCBP4-203ENST00000428823 ARHGEF12Q9NZN5 1544 aa24.78■■□□□ 1.56
PCBP4-203ENST00000428823 OSCARQ8IYS5 282 aa24.77■■□□□ 1.56
PCBP4-203ENST00000428823 ABCA9Q8IUA7 1624 aa24.77■■□□□ 1.56
PCBP4-203ENST00000428823 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
PCBP4-203ENST00000428823 DUOX2Q9NRD8 1548 aa24.75■■□□□ 1.55
PCBP4-203ENST00000428823 SCAF1Q9H7N4 1312 aaKnown RBP24.75■■□□□ 1.55
PCBP4-203ENST00000428823 FAM135AQ9P2D6 1515 aa24.74■■□□□ 1.55
PCBP4-203ENST00000428823 YTHDC1Q96MU7 727 aaKnown RBP24.74■■□□□ 1.55
PCBP4-203ENST00000428823 HIRIP3Q9BW71 556 aaPredicted RBP24.72■■□□□ 1.55
PCBP4-203ENST00000428823 ERBINQ96RT1 1412 aa24.71■■□□□ 1.55
PCBP4-203ENST00000428823 IQGAP3Q86VI3 1631 aa24.71■■□□□ 1.55
PCBP4-203ENST00000428823 EIF4G2P78344 907 aaKnown RBP eCLIP24.7■■□□□ 1.55
PCBP4-203ENST00000428823 MAGI2Q86UL8 1455 aa24.68■■□□□ 1.54
PCBP4-203ENST00000428823 RTEL1-TNFRSF6BF6WH68 1400 aa24.67■■□□□ 1.54
PCBP4-203ENST00000428823 HSPA5P11021 654 aaKnown RBP24.67■■□□□ 1.54
PCBP4-203ENST00000428823 NBPF8Q3BBV2 869 aa24.66■■□□□ 1.54
PCBP4-203ENST00000428823 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
PCBP4-203ENST00000428823 POLR1AO95602 1720 aaPredicted RBP24.65■■□□□ 1.54
PCBP4-203ENST00000428823 ASXL2Q76L83 1435 aa24.65■■□□□ 1.54
PCBP4-203ENST00000428823 UHRF1BP1Q6BDS2 1440 aa24.62■■□□□ 1.53
PCBP4-203ENST00000428823 FANCAO15360 1455 aa24.62■■□□□ 1.53
PCBP4-203ENST00000428823 ZFYVE16Q7Z3T8 1539 aa24.62■■□□□ 1.53
PCBP4-203ENST00000428823 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
PCBP4-203ENST00000428823 INO80Q9ULG1 1556 aaPredicted RBP24.58■■□□□ 1.53
PCBP4-203ENST00000428823 WASHC2AQ641Q2 1341 aa24.56■■□□□ 1.52
PCBP4-203ENST00000428823 SPAG9O60271 1321 aaKnown RBP24.56■■□□□ 1.52
PCBP4-203ENST00000428823 CCER2I3L3R5 266 aa24.56■■□□□ 1.52
PCBP4-203ENST00000428823 ANP32CO43423 234 aa24.56■■□□□ 1.52
PCBP4-203ENST00000428823 ATP10AO60312 1499 aa24.55■■□□□ 1.52
PCBP4-203ENST00000428823 ATP7AQ04656 1500 aa24.54■■□□□ 1.52
PCBP4-203ENST00000428823 RALGAPBQ86X10 1494 aa24.54■■□□□ 1.52
PCBP4-203ENST00000428823 DEPDC5O75140 1603 aa24.54■■□□□ 1.52
PCBP4-203ENST00000428823 ADGRL1O94910 1474 aa24.53■■□□□ 1.52
PCBP4-203ENST00000428823 NPM1P06748 294 aaKnown RBP eCLIP24.53■■□□□ 1.52
PCBP4-203ENST00000428823 CFAP74Q9C0B2 1584 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms