RNA–Protein interactions for RNA: ENST00000428695.5

SATB2-203, Transcript of SATB homeobox 2, humanhuman

TSL 1 (best) BASIC

Gene SATB2, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-203ENST00000428695 ABCC5O15440 1437 aa25.52■■□□□ 1.68
SATB2-203ENST00000428695 KIF14Q15058 1648 aa25.52■■□□□ 1.68
SATB2-203ENST00000428695 ABCA8O94911 1581 aa25.51■■□□□ 1.67
SATB2-203ENST00000428695 KDM5BQ9UGL1 1544 aa25.48■■□□□ 1.67
SATB2-203ENST00000428695 TRIM52Q96A61 297 aa25.48■■□□□ 1.67
SATB2-203ENST00000428695 ADGBQ8N7X0 1667 aa25.47■■□□□ 1.67
SATB2-203ENST00000428695 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
SATB2-203ENST00000428695 ZNF644Q9H582 1327 aaPredicted RBP25.46■■□□□ 1.67
SATB2-203ENST00000428695 CROCC2H7BZ55 1655 aa25.45■■□□□ 1.66
SATB2-203ENST00000428695 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.66
SATB2-203ENST00000428695 CHD1O14646 1710 aa25.42■■□□□ 1.66
SATB2-203ENST00000428695 MPHOSPH9Q99550 1183 aa25.41■■□□□ 1.66
SATB2-203ENST00000428695 CDC42BPAQ5VT25 1732 aa25.41■■□□□ 1.66
SATB2-203ENST00000428695 CFDP1Q9UEE9 299 aaPredicted RBP25.4■■□□□ 1.66
SATB2-203ENST00000428695 DDX10Q13206 875 aaKnown RBP25.38■■□□□ 1.65
SATB2-203ENST00000428695 ATP10BO94823 1461 aa25.37■■□□□ 1.65
SATB2-203ENST00000428695 ADGRL2O95490 1459 aa25.34■■□□□ 1.65
SATB2-203ENST00000428695 HIRIP3Q9BW71 556 aaPredicted RBP25.33■■□□□ 1.65
SATB2-203ENST00000428695 ABCC10Q5T3U5 1492 aa25.33■■□□□ 1.65
SATB2-203ENST00000428695 PLEKHD1A6NEE1 506 aa25.32■■□□□ 1.64
SATB2-203ENST00000428695 NCOA1Q15788 1441 aa25.31■■□□□ 1.64
SATB2-203ENST00000428695 SHROOM2Q13796 1616 aa25.29■■□□□ 1.64
SATB2-203ENST00000428695 PTPRGP23470 1445 aa25.28■■□□□ 1.64
SATB2-203ENST00000428695 ANKRD30BQ9BXX2 1392 aa25.28■■□□□ 1.64
SATB2-203ENST00000428695 ZNF777Q9ULD5 760 aaPredicted RBP25.27■■□□□ 1.64
SATB2-203ENST00000428695 RPRD2Q5VT52 1461 aaKnown RBP25.26■■□□□ 1.63
SATB2-203ENST00000428695 SHANK2Q9UPX8 1470 aa25.24■■□□□ 1.63
SATB2-203ENST00000428695 FOXD1Q16676 465 aa25.24■■□□□ 1.63
SATB2-203ENST00000428695 PZPP20742 1482 aa25.24■■□□□ 1.63
SATB2-203ENST00000428695 ANKRD30AQ9BXX3 1397 aa25.23■■□□□ 1.63
SATB2-203ENST00000428695 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
SATB2-203ENST00000428695 TEX14Q8IWB6 1497 aa25.2■■□□□ 1.62
SATB2-203ENST00000428695 L3MBTL2Q969R5 705 aa25.19■■□□□ 1.62
SATB2-203ENST00000428695 KCNH8Q96L42 1107 aa25.19■■□□□ 1.62
SATB2-203ENST00000428695 PREX2Q70Z35 1606 aa25.17■■□□□ 1.62
SATB2-203ENST00000428695 ARHGEF5Q12774 1597 aa25.17■■□□□ 1.62
SATB2-203ENST00000428695 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
SATB2-203ENST00000428695 C9orf84Q5VXU9 1444 aa25.16■■□□□ 1.62
SATB2-203ENST00000428695 ANP32CO43423 234 aa25.15■■□□□ 1.62
SATB2-203ENST00000428695 ANKRD50Q9ULJ7 1429 aa25.15■■□□□ 1.62
SATB2-203ENST00000428695 CCER2I3L3R5 266 aa25.13■■□□□ 1.61
SATB2-203ENST00000428695 HSPA5P11021 654 aaKnown RBP25.12■■□□□ 1.61
SATB2-203ENST00000428695 KIAA1107Q9UPP5 1409 aa25.11■■□□□ 1.61
SATB2-203ENST00000428695 SAMD9LQ8IVG5 1584 aa25.11■■□□□ 1.61
SATB2-203ENST00000428695 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.616e-6■■■■□ 25.1
SATB2-203ENST00000428695 PELP1Q8IZL8 1130 aaKnown RBP25.1■■□□□ 1.61
SATB2-203ENST00000428695 ERCC6L2Q5T890 1561 aa25.08■■□□□ 1.61
SATB2-203ENST00000428695 ABCC2Q92887 1545 aa25.08■■□□□ 1.6
SATB2-203ENST00000428695 KDM5DQ9BY66 1539 aa25.07■■□□□ 1.6
SATB2-203ENST00000428695 MBD5Q9P267 1494 aa25.07■■□□□ 1.6
SATB2-203ENST00000428695 TSPY4P0CV99 314 aa25.06■■□□□ 1.6
SATB2-203ENST00000428695 TSPY10P0CW01 314 aa25.06■■□□□ 1.6
SATB2-203ENST00000428695 TTC37Q6PGP7 1564 aa25.05■■□□□ 1.6
SATB2-203ENST00000428695 CCDC141Q6ZP82 1450 aa25.05■■□□□ 1.6
SATB2-203ENST00000428695 POLR1AO95602 1720 aaPredicted RBP25.04■■□□□ 1.6
SATB2-203ENST00000428695 WASHC2AQ641Q2 1341 aa25.04■■□□□ 1.6
SATB2-203ENST00000428695 NBPF8Q3BBV2 869 aa25.03■■□□□ 1.6
SATB2-203ENST00000428695 MYO5CQ9NQX4 1742 aa25.03■■□□□ 1.6
SATB2-203ENST00000428695 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
SATB2-203ENST00000428695 HNRNPMP52272 730 aaKnown RBP eCLIP25.01■■□□□ 1.59
SATB2-203ENST00000428695 KIF15Q9NS87 1388 aa25.01■■□□□ 1.59
SATB2-203ENST00000428695 PKD2Q13563 968 aa25.01■■□□□ 1.59
SATB2-203ENST00000428695 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.01■■□□□ 1.59
SATB2-203ENST00000428695 NUP155O75694 1391 aa24.99■■□□□ 1.59
SATB2-203ENST00000428695 ARHGAP5Q13017 1502 aa24.98■■□□□ 1.59
SATB2-203ENST00000428695 MAST1Q9Y2H9 1570 aa24.97■■□□□ 1.59
SATB2-203ENST00000428695 SYCP2Q9BX26 1530 aa24.97■■□□□ 1.59
SATB2-203ENST00000428695 RSPH4AQ5TD94 716 aa24.97■■□□□ 1.59
SATB2-203ENST00000428695 SPATA31E1Q6ZUB1 1445 aa24.94■■□□□ 1.58
SATB2-203ENST00000428695 CNTLNQ9NXG0 1405 aa24.94■■□□□ 1.58
SATB2-203ENST00000428695 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
SATB2-203ENST00000428695 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
SATB2-203ENST00000428695 UHRF1BP1LA0JNW5 1464 aa24.9■■□□□ 1.58
SATB2-203ENST00000428695 PLEKHH2Q8IVE3 1493 aa24.9■■□□□ 1.58
SATB2-203ENST00000428695 PLXNC1O60486 1568 aa24.89■■□□□ 1.57
SATB2-203ENST00000428695 ARHGEF12Q9NZN5 1544 aa24.89■■□□□ 1.57
SATB2-203ENST00000428695 SUPT16HQ9Y5B9 1047 aaKnown RBP24.88■■□□□ 1.57
SATB2-203ENST00000428695 C11orf95C9JLR9 678 aaPredicted RBP24.87■■□□□ 1.57
SATB2-203ENST00000428695 UNC13BO14795 1591 aa24.87■■□□□ 1.57
SATB2-203ENST00000428695 FAM135AQ9P2D6 1515 aa24.87■■□□□ 1.57
SATB2-203ENST00000428695 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
SATB2-203ENST00000428695 KDM5CP41229 1560 aa24.82■■□□□ 1.56
SATB2-203ENST00000428695 RALGAPBQ86X10 1494 aa24.8■■□□□ 1.56
SATB2-203ENST00000428695 KIF7Q2M1P5 1343 aa24.8■■□□□ 1.56
SATB2-203ENST00000428695 PLCH2O75038 1416 aa24.79■■□□□ 1.56
SATB2-203ENST00000428695 BCORL1Q5H9F3 1711 aa24.78■■□□□ 1.56
SATB2-203ENST00000428695 USP47Q96K76 1375 aa24.78■■□□□ 1.56
SATB2-203ENST00000428695 IQGAP3Q86VI3 1631 aa24.77■■□□□ 1.56
SATB2-203ENST00000428695 ZNF326Q5BKZ1 582 aaKnown RBP24.77■■□□□ 1.56
SATB2-203ENST00000428695 DUOX2Q9NRD8 1548 aa24.76■■□□□ 1.55
SATB2-203ENST00000428695 ABCC1P33527 1531 aa24.76■■□□□ 1.55
SATB2-203ENST00000428695 EFCAB2Q5VUJ9 269 aa24.71■■□□□ 1.55
SATB2-203ENST00000428695 PRKRIP1Q9H875 184 aaPredicted RBP24.71■■□□□ 1.55
SATB2-203ENST00000428695 ERBINQ96RT1 1412 aa24.71■■□□□ 1.55
SATB2-203ENST00000428695 ARAP3Q8WWN8 1544 aa24.7■■□□□ 1.54
SATB2-203ENST00000428695 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.54
SATB2-203ENST00000428695 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
SATB2-203ENST00000428695 ARID4BQ4LE39 1312 aaPredicted RBP24.67■■□□□ 1.54
SATB2-203ENST00000428695 DCAF11Q8TEB1 546 aa24.65■■□□□ 1.54
SATB2-203ENST00000428695 TRPM1Q7Z4N2 1603 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms