RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 STRCQ7RTU9 1775 aa13.78□□□□□ -0.2
CSTF1-203ENST00000428552 PREX1Q8TCU6 1659 aa13.78□□□□□ -0.2
CSTF1-203ENST00000428552 MLECQ14165 292 aa13.77□□□□□ -0.21
CSTF1-203ENST00000428552 CDK13Q14004 1512 aaKnown RBP13.76□□□□□ -0.21
CSTF1-203ENST00000428552 SCAPERQ9BY12 1400 aa13.76□□□□□ -0.21
CSTF1-203ENST00000428552 ATP10AO60312 1499 aa13.75□□□□□ -0.21
CSTF1-203ENST00000428552 PLCH2O75038 1416 aa13.75□□□□□ -0.21
CSTF1-203ENST00000428552 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
CSTF1-203ENST00000428552 CEBPAP49715 358 aaPredicted RBP13.74□□□□□ -0.21
CSTF1-203ENST00000428552 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
CSTF1-203ENST00000428552 DISP3Q9P2K9 1392 aa13.73□□□□□ -0.21
CSTF1-203ENST00000428552 SOCS7O14512 581 aa13.73□□□□□ -0.21
CSTF1-203ENST00000428552 KDM5CP41229 1560 aa13.7□□□□□ -0.22
CSTF1-203ENST00000428552 KIF14Q15058 1648 aa13.68□□□□□ -0.22
CSTF1-203ENST00000428552 LTBP4Q8N2S1 1624 aa13.68□□□□□ -0.22
CSTF1-203ENST00000428552 MYO5CQ9NQX4 1742 aa13.67□□□□□ -0.22
CSTF1-203ENST00000428552 DIP2CQ9Y2E4 1556 aa13.67□□□□□ -0.22
CSTF1-203ENST00000428552 SPATA31D1Q6ZQQ2 1576 aa13.66□□□□□ -0.22
CSTF1-203ENST00000428552 PTPRTO14522 1441 aa13.66□□□□□ -0.22
CSTF1-203ENST00000428552 EEA1Q15075 1411 aa13.66□□□□□ -0.22
CSTF1-203ENST00000428552 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
CSTF1-203ENST00000428552 ZNF518AQ6AHZ1 1483 aa13.66□□□□□ -0.22
CSTF1-203ENST00000428552 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
CSTF1-203ENST00000428552 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
CSTF1-203ENST00000428552 C3P01024 1663 aa13.65□□□□□ -0.22
CSTF1-203ENST00000428552 ABCA6Q8N139 1617 aa13.64□□□□□ -0.23
CSTF1-203ENST00000428552 EFCAB2Q5VUJ9 269 aa13.64□□□□□ -0.23
CSTF1-203ENST00000428552 AFAP1Q8N556 730 aa13.64□□□□□ -0.23
CSTF1-203ENST00000428552 SETD1BQ9UPS6 1966 aaKnown RBP13.62□□□□□ -0.23
CSTF1-203ENST00000428552 LRRIQ1Q96JM4 1722 aa13.61□□□□□ -0.23
CSTF1-203ENST00000428552 MLH3Q9UHC1 1453 aa13.61□□□□□ -0.23
CSTF1-203ENST00000428552 AGLP35573 1532 aa13.6□□□□□ -0.23
CSTF1-203ENST00000428552 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
CSTF1-203ENST00000428552 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
CSTF1-203ENST00000428552 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
CSTF1-203ENST00000428552 ARHGAP35Q9NRY4 1499 aa13.6□□□□□ -0.23
CSTF1-203ENST00000428552 CDC42BPBQ9Y5S2 1711 aa13.59□□□□□ -0.23
CSTF1-203ENST00000428552 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
CSTF1-203ENST00000428552 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.24
CSTF1-203ENST00000428552 FMN1Q68DA7 1419 aa13.57□□□□□ -0.24
CSTF1-203ENST00000428552 ABCC1P33527 1531 aa13.57□□□□□ -0.24
CSTF1-203ENST00000428552 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
CSTF1-203ENST00000428552 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
CSTF1-203ENST00000428552 ITSN2Q9NZM3 1697 aa13.55□□□□□ -0.24
CSTF1-203ENST00000428552 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
CSTF1-203ENST00000428552 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
CSTF1-203ENST00000428552 CDK11AQ9UQ88 783 aaPredicted RBP13.52□□□□□ -0.25
CSTF1-203ENST00000428552 MROH2AA6NES4 1674 aa13.51□□□□□ -0.25
CSTF1-203ENST00000428552 CLIP1P30622 1438 aa13.51□□□□□ -0.25
CSTF1-203ENST00000428552 NPATQ14207 1427 aa13.51□□□□□ -0.25
CSTF1-203ENST00000428552 CNTLNQ9NXG0 1405 aa13.51□□□□□ -0.25
CSTF1-203ENST00000428552 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
CSTF1-203ENST00000428552 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
CSTF1-203ENST00000428552 SAMD9LQ8IVG5 1584 aa13.49□□□□□ -0.25
CSTF1-203ENST00000428552 CDC42BPAQ5VT25 1732 aa13.48□□□□□ -0.25
CSTF1-203ENST00000428552 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
CSTF1-203ENST00000428552 ZMYM3Q14202 1370 aa13.47□□□□□ -0.25
CSTF1-203ENST00000428552 ZNF142P52746 1687 aaPredicted RBP13.47□□□□□ -0.25
CSTF1-203ENST00000428552 TCOF1Q13428 1488 aaKnown RBP13.47□□□□□ -0.25
CSTF1-203ENST00000428552 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.25
CSTF1-203ENST00000428552 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
CSTF1-203ENST00000428552 PLA2R1Q13018 1463 aa13.46□□□□□ -0.25
CSTF1-203ENST00000428552 PLXNC1O60486 1568 aa13.45□□□□□ -0.26
CSTF1-203ENST00000428552 ESF1Q9H501 851 aaKnown RBP13.45□□□□□ -0.26
CSTF1-203ENST00000428552 CLTCQ00610 1675 aaKnown RBP13.44□□□□□ -0.26
CSTF1-203ENST00000428552 UBTFP17480 764 aaKnown RBP13.44□□□□□ -0.26
CSTF1-203ENST00000428552 PTPRKQ15262 1439 aa13.44□□□□□ -0.26
CSTF1-203ENST00000428552 CEP170BQ9Y4F5 1589 aaPredicted RBP13.44□□□□□ -0.26
CSTF1-203ENST00000428552 SYCP2Q9BX26 1530 aa13.44□□□□□ -0.26
CSTF1-203ENST00000428552 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
CSTF1-203ENST00000428552 SUPT6HQ7KZ85 1726 aaKnown RBP13.43□□□□□ -0.26
CSTF1-203ENST00000428552 CASKIN1Q8WXD9 1431 aa13.43□□□□□ -0.26
CSTF1-203ENST00000428552 INO80Q9ULG1 1556 aaPredicted RBP13.42□□□□□ -0.26
CSTF1-203ENST00000428552 CCDC18Q5T9S5 1454 aa13.42□□□□□ -0.26
CSTF1-203ENST00000428552 GPATCH8Q9UKJ3 1502 aaKnown RBP13.41□□□□□ -0.26
CSTF1-203ENST00000428552 ATP7AQ04656 1500 aa13.4□□□□□ -0.26
CSTF1-203ENST00000428552 PKD2Q13563 968 aa13.4□□□□□ -0.26
CSTF1-203ENST00000428552 MED1Q15648 1581 aaPredicted RBP13.39□□□□□ -0.27
CSTF1-203ENST00000428552 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
CSTF1-203ENST00000428552 A2MP01023 1474 aa13.38□□□□□ -0.27
CSTF1-203ENST00000428552 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
CSTF1-203ENST00000428552 NEURL4Q96JN8 1562 aa13.37□□□□□ -0.27
CSTF1-203ENST00000428552 DNMT1P26358 1616 aaKnown RBP13.37□□□□□ -0.27
CSTF1-203ENST00000428552 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
CSTF1-203ENST00000428552 ALKQ9UM73 1620 aa13.36□□□□□ -0.27
CSTF1-203ENST00000428552 HSPA1LP34931 641 aa13.36□□□□□ -0.27
CSTF1-203ENST00000428552 ZNF777Q9ULD5 760 aaPredicted RBP13.36□□□□□ -0.27
CSTF1-203ENST00000428552 A2ML1A8K2U0 1454 aa13.36□□□□□ -0.27
CSTF1-203ENST00000428552 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
CSTF1-203ENST00000428552 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
CSTF1-203ENST00000428552 ADGBQ8N7X0 1667 aa13.32□□□□□ -0.28
CSTF1-203ENST00000428552 GGT6Q6P531 493 aa13.32□□□□□ -0.28
CSTF1-203ENST00000428552 POLR1AO95602 1720 aaPredicted RBP13.32□□□□□ -0.28
CSTF1-203ENST00000428552 PLEKHH2Q8IVE3 1493 aa13.31□□□□□ -0.28
CSTF1-203ENST00000428552 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
CSTF1-203ENST00000428552 CPS1P31327 1500 aa13.31□□□□□ -0.28
CSTF1-203ENST00000428552 VWDEQ8N2E2 1590 aa13.31□□□□□ -0.28
CSTF1-203ENST00000428552 MBD5Q9P267 1494 aa13.3□□□□□ -0.28
CSTF1-203ENST00000428552 PIP4K2BP78356 416 aa13.29□□□□□ -0.28
CSTF1-203ENST00000428552 FBXO31Q5XUX0 539 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms